Miyakogusa Predicted Gene

Lj4g3v0974400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0974400.1 tr|A9RES0|A9RES0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65167
,34.18,1e-18,BAH,Bromo adjacent homology (BAH) domain; seg,NULL; Bromo
adjacent homology domain,Bromo adjacent ho,CUFF.48236.1
         (174 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g08530.1                                                       232   1e-61
Glyma14g20400.1                                                       197   3e-51
Glyma13g43940.1                                                       149   1e-36
Glyma05g37830.2                                                        48   6e-06
Glyma05g37830.1                                                        48   6e-06

>Glyma06g08530.1 
          Length = 628

 Score =  232 bits (592), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 116/172 (67%), Positives = 134/172 (77%), Gaps = 1/172 (0%)

Query: 3   EESIEFKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSGGEFEPFVGKLIKIFE 62
           EE IEFKW           DVQFYESFTYDGV+Y+L+D+V+L   GE E ++GK++KI+E
Sbjct: 7   EEVIEFKWGTRKGLGGKKKDVQFYESFTYDGVEYSLFDSVFLYKEGEPEHYIGKILKIWE 66

Query: 63  NRDKSKKVKVQWYFRPGEIRKFVEGIETRHNELFFACGEGLGLANVNPLEAIAGKCNVVC 122
           N DKSKKVK+ WYFRP EI  F+EG ET  NELF A GEG GL NVNPLEAI+GKCN+VC
Sbjct: 67  NSDKSKKVKILWYFRPSEILNFLEGSETLENELFLASGEGEGLVNVNPLEAISGKCNIVC 126

Query: 123 ISKDIRNSQPSDEALQKADFVFHRFFDVGQRKILDTI-DDKSAGIEVKDIFN 173
           ISKDIRN  PSDE +Q A+FVF+RFFDVG RKILD I  DK AGIEVK+IFN
Sbjct: 127 ISKDIRNPYPSDEEVQMAEFVFYRFFDVGMRKILDKIVVDKIAGIEVKNIFN 178


>Glyma14g20400.1 
          Length = 189

 Score =  197 bits (502), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 105/171 (61%), Positives = 126/171 (73%), Gaps = 6/171 (3%)

Query: 8   FKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSG-GEFEPFVGKLIKIFENRDK 66
           F W           DVQFYESF++DG +YA+ DTV L SG G  EP +G+LIKI+E RDK
Sbjct: 21  FAWGKKRGMGGKKKDVQFYESFSFDGAEYAINDTVCLQSGIGGGEPHIGRLIKIWETRDK 80

Query: 67  SKKVKVQWYFRPGEIRKFVEGIETRHNELFFACG--EGLGLANVNPLEAIAGKCNVVCIS 124
           S+KVKVQW+FRP EI K++ GIE + NELF ACG     G ANVNPLEAI GKCNVVCIS
Sbjct: 81  SRKVKVQWFFRPAEICKYLVGIEVKPNELFLACGGDGAKGFANVNPLEAIVGKCNVVCIS 140

Query: 125 KDIRNSQPSDEALQKADFVFHRFFDVGQRKILDTIDDK-SAGIEVKDIFNK 174
           KD+ N QPS EA  KAD+V++RFFDV Q K++D ID K +AGIEVK++ NK
Sbjct: 141 KDVGNPQPSGEA--KADYVYYRFFDVVQLKVVDQIDVKVAAGIEVKNVSNK 189


>Glyma13g43940.1 
          Length = 212

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/162 (46%), Positives = 105/162 (64%)

Query: 6   IEFKWXXXXXXXXXXXDVQFYESFTYDGVDYALYDTVYLDSGGEFEPFVGKLIKIFENRD 65
           I+FKW           D+Q+YESF Y+GV Y LYD VYL + G  E  +GKL+KIFE R+
Sbjct: 2   IDFKWGDKRGVGGKNKDIQYYESFVYEGVQYFLYDCVYLYTAGHVETSIGKLVKIFETRN 61

Query: 66  KSKKVKVQWYFRPGEIRKFVEGIETRHNELFFACGEGLGLANVNPLEAIAGKCNVVCISK 125
           + K +K+ W+FRP +IR ++   +   NELF A GEG G++N N LE+I  KC+V+C SK
Sbjct: 62  RQKMIKLVWFFRPFDIRNWLGQYKPCWNELFLASGEGKGVSNFNYLESIIRKCSVICTSK 121

Query: 126 DIRNSQPSDEALQKADFVFHRFFDVGQRKILDTIDDKSAGIE 167
           D RN +PS+  L+KAD+ F+  FDV +  I+D   ++  GI 
Sbjct: 122 DKRNPKPSEIELKKADYFFNCTFDVVRGVIIDQFTNEIDGIR 163


>Glyma05g37830.2 
          Length = 574

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 20/144 (13%)

Query: 24  QFYESFTYDGVDYALYDTVYLD-SGGEFEPFVGKLIKIFENRDKSKKVKVQWYFRPGEIR 82
           + YESF YDG  Y L D + L     + +P+V  +  I ++ + S  V  QW++RP E  
Sbjct: 110 KHYESFEYDGNQYTLEDPILLTPEDKDQKPYVAIIKDITQSLNGSMMVTGQWFYRPEEAE 169

Query: 83  KFVEG----IETRHNELFFACGEGLGLANVNPLEAIAGKCNV--VCISKDIRNSQPSDEA 136
           +   G     +TR  ELF++        +  P E++  KC V  V I K + N +     
Sbjct: 170 RKGGGSWQSCDTR--ELFYSFHR-----DDVPAESVMHKCVVHFVPIHKQLPNRK----- 217

Query: 137 LQKADFVFHRFFDVGQRKILDTID 160
            Q   F+  + +D  +RK+    D
Sbjct: 218 -QHPGFIVQKVYDTVERKLWKLTD 240


>Glyma05g37830.1 
          Length = 584

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 20/144 (13%)

Query: 24  QFYESFTYDGVDYALYDTVYLD-SGGEFEPFVGKLIKIFENRDKSKKVKVQWYFRPGEIR 82
           + YESF YDG  Y L D + L     + +P+V  +  I ++ + S  V  QW++RP E  
Sbjct: 110 KHYESFEYDGNQYTLEDPILLTPEDKDQKPYVAIIKDITQSLNGSMMVTGQWFYRPEEAE 169

Query: 83  KFVEG----IETRHNELFFACGEGLGLANVNPLEAIAGKCNV--VCISKDIRNSQPSDEA 136
           +   G     +TR  ELF++        +  P E++  KC V  V I K + N +     
Sbjct: 170 RKGGGSWQSCDTR--ELFYSFHR-----DDVPAESVMHKCVVHFVPIHKQLPNRK----- 217

Query: 137 LQKADFVFHRFFDVGQRKILDTID 160
            Q   F+  + +D  +RK+    D
Sbjct: 218 -QHPGFIVQKVYDTVERKLWKLTD 240