Miyakogusa Predicted Gene

Lj4g3v0949910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0949910.1 tr|F2XX47|F2XX47_LITCN Succinate dehydrogenase
OS=Litchi chinensis PE=2
SV=1,87.18,0.00000000000009,Succ_DH_flav_C,Fumarate
reductase/succinate dehydrogenase flavoprotein-like,
C-terminal,CUFF.48212.1
         (39 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g07250.1                                                        77   3e-15
Glyma01g38200.1                                                        77   3e-15
Glyma01g24590.1                                                        76   9e-15
Glyma02g06400.1                                                        76   1e-14
Glyma01g24590.2                                                        75   1e-14
Glyma11g07250.2                                                        74   3e-14
Glyma16g25480.1                                                        64   3e-11

>Glyma11g07250.1 
          Length = 630

 Score = 77.4 bits (189), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/39 (82%), Positives = 34/39 (87%)

Query: 1   MKHTVGYWENEKVRLDYRPVHMNTLDDEAEPVPPFARVY 39
           MKHTVG+WENEKVRLDYRPVH+N LDDE E  PP ARVY
Sbjct: 592 MKHTVGFWENEKVRLDYRPVHLNVLDDEVESFPPKARVY 630


>Glyma01g38200.1 
          Length = 630

 Score = 77.4 bits (189), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/39 (82%), Positives = 34/39 (87%)

Query: 1   MKHTVGYWENEKVRLDYRPVHMNTLDDEAEPVPPFARVY 39
           MKHTVG+WENEKVRLDYRPVH+N LDDE E  PP ARVY
Sbjct: 592 MKHTVGFWENEKVRLDYRPVHLNVLDDEVESFPPKARVY 630


>Glyma01g24590.1 
          Length = 113

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 35/39 (89%)

Query: 1   MKHTVGYWENEKVRLDYRPVHMNTLDDEAEPVPPFARVY 39
           MKHT+GYW+NEKVRLDYRPVHMNTLDDE E  PP ARVY
Sbjct: 75  MKHTLGYWDNEKVRLDYRPVHMNTLDDEVESFPPKARVY 113


>Glyma02g06400.1 
          Length = 634

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 35/39 (89%)

Query: 1   MKHTVGYWENEKVRLDYRPVHMNTLDDEAEPVPPFARVY 39
           MKHT+GYW+NEKVRLDYRPVHMNTLDDE E  PP ARVY
Sbjct: 596 MKHTLGYWDNEKVRLDYRPVHMNTLDDEVESFPPKARVY 634


>Glyma01g24590.2 
          Length = 82

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 35/39 (89%)

Query: 1  MKHTVGYWENEKVRLDYRPVHMNTLDDEAEPVPPFARVY 39
          MKHT+GYW+NEKVRLDYRPVHMNTLDDE E  PP ARVY
Sbjct: 44 MKHTLGYWDNEKVRLDYRPVHMNTLDDEVESFPPKARVY 82


>Glyma11g07250.2 
          Length = 543

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 34/39 (87%)

Query: 1   MKHTVGYWENEKVRLDYRPVHMNTLDDEAEPVPPFARVY 39
           MKHTVG+WENEKVRLDYRPVH+N LDDE E  PP ARVY
Sbjct: 505 MKHTVGFWENEKVRLDYRPVHLNVLDDEVESFPPKARVY 543


>Glyma16g25480.1 
          Length = 54

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/35 (82%), Positives = 30/35 (85%)

Query: 5  VGYWENEKVRLDYRPVHMNTLDDEAEPVPPFARVY 39
          + YWENEKVRLDYRPVHMNTLDDE E  PP ARVY
Sbjct: 20 IKYWENEKVRLDYRPVHMNTLDDEVESFPPKARVY 54