Miyakogusa Predicted Gene

Lj4g3v0913490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0913490.1 tr|E9BZ66|E9BZ66_CAPO3 Vacuolar proton pump
subunit H OS=Capsaspora owczarzaki (strain ATCC 30864)
G,33.96,0.00000000003,ARM repeat,Armadillo-type fold; V-TYPE PROTON
ATPASE SUBUNIT H,NULL; V-TYPE PROTON ATPASE SUBUNIT
H,,NODE_40529_length_590_cov_184.867798.path2.1
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g25740.1                                                       213   6e-56
Glyma02g06710.1                                                       209   4e-55

>Glyma16g25740.1 
          Length = 416

 Score =  213 bits (541), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 102/111 (91%), Positives = 106/111 (95%)

Query: 1   MDQAELTVDQVLSRDIPWETYMSTKLISGTSLQLLRRYDHRSESHRAQLLDDDGPAYVRV 60
           MDQAELT +QVL RDIPWETYMSTKLISGTSLQLLRRYDHR ESHRAQLLDDDGP+YVRV
Sbjct: 1   MDQAELTSEQVLRRDIPWETYMSTKLISGTSLQLLRRYDHRPESHRAQLLDDDGPSYVRV 60

Query: 61  FIHVLRDIFKEDTVEYVLALIDEMLTANPKRARLFHDSALADEDTYEPFLN 111
           F+ VLRDIFKEDTVEYVLALIDEML ANPKRARLFHDSALADEDTYEPFL+
Sbjct: 61  FVRVLRDIFKEDTVEYVLALIDEMLAANPKRARLFHDSALADEDTYEPFLS 111


>Glyma02g06710.1 
          Length = 622

 Score =  209 bits (533), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 101/111 (90%), Positives = 105/111 (94%)

Query: 1   MDQAELTVDQVLSRDIPWETYMSTKLISGTSLQLLRRYDHRSESHRAQLLDDDGPAYVRV 60
           M QAELT +QVL RDIPWETYMSTKLISGTSLQLLRRYDHR ESHRAQLLDDDGP+YVRV
Sbjct: 1   MYQAELTSEQVLRRDIPWETYMSTKLISGTSLQLLRRYDHRPESHRAQLLDDDGPSYVRV 60

Query: 61  FIHVLRDIFKEDTVEYVLALIDEMLTANPKRARLFHDSALADEDTYEPFLN 111
           F+ VLRDIFKEDTVEYVLALIDEML ANPKRARLFHDSALADEDTYEPFL+
Sbjct: 61  FVRVLRDIFKEDTVEYVLALIDEMLAANPKRARLFHDSALADEDTYEPFLS 111