Miyakogusa Predicted Gene

Lj4g3v0913480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0913480.1 tr|G7LFK4|G7LFK4_MEDTR V-type proton ATPase
subunit H OS=Medicago truncatula GN=MTR_8g078370 PE=4
SV,93.21,0,V-TYPE PROTON ATPASE SUBUNIT H,NULL; V-TYPE PROTON ATPASE
SUBUNIT H,ATPase, V1 complex, subunit H;
n,NODE_30654_length_1094_cov_283.676422.path2.1
         (163 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g06710.1                                                       298   2e-81
Glyma16g25740.1                                                       155   1e-38
Glyma04g33520.1                                                       100   6e-22

>Glyma02g06710.1 
          Length = 622

 Score =  298 bits (763), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/162 (87%), Positives = 155/162 (95%)

Query: 1   MVDLQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDKYKQEVLLGNLDWSP 60
           MVDLQL QVV SLKAQAWSDEDLLEALNSLEEGLKDNIK+LSSFD YKQEVLLG+LDWSP
Sbjct: 460 MVDLQLAQVVLSLKAQAWSDEDLLEALNSLEEGLKDNIKRLSSFDMYKQEVLLGHLDWSP 519

Query: 61  MHKDLIFWRENVTNFEENDFQIVRVLITILDSSNDPRTLAVACFDLSQFVQYHPSGRIIV 120
           MHKD IFWREN+ NFEENDFQI+RVL+TILD+S+DPRTLAVAC+DLSQF+Q+H +GRIIV
Sbjct: 520 MHKDPIFWRENINNFEENDFQILRVLLTILDTSSDPRTLAVACYDLSQFIQHHSAGRIIV 579

Query: 121 ADLKAKERVMKLMNHESAEVTKNALLCIQRLFLGAKYASFLQ 162
           +DLKAKERVMKLMNHE+ EVTKNALLCIQRLFLGAKYASFLQ
Sbjct: 580 SDLKAKERVMKLMNHENVEVTKNALLCIQRLFLGAKYASFLQ 621


>Glyma16g25740.1 
          Length = 416

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/81 (91%), Positives = 77/81 (95%)

Query: 1   MVDLQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDKYKQEVLLGNLDWSP 60
           MVDLQL QVVQSLKAQAWSDEDLLEALNSLEEGLKDNIK+LSSFD YKQEVLLG+LDWSP
Sbjct: 326 MVDLQLAQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKRLSSFDMYKQEVLLGHLDWSP 385

Query: 61  MHKDLIFWRENVTNFEENDFQ 81
           MHKD IFWREN+ NFEENDFQ
Sbjct: 386 MHKDPIFWRENINNFEENDFQ 406


>Glyma04g33520.1 
          Length = 240

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/81 (66%), Positives = 59/81 (72%), Gaps = 6/81 (7%)

Query: 1   MVDLQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDKYKQEVLLGNLDWSP 60
           MVDLQL  VV SLK QAWSDEDLLEALN        NIK+LSSFD YKQE+LL +LDWSP
Sbjct: 166 MVDLQLALVVLSLKDQAWSDEDLLEALNF------HNIKRLSSFDIYKQEILLDHLDWSP 219

Query: 61  MHKDLIFWRENVTNFEENDFQ 81
           MHKD +F  EN+ NF  N  Q
Sbjct: 220 MHKDSVFIFENINNFCSNYLQ 240