Miyakogusa Predicted Gene

Lj4g3v0843260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0843260.1 tr|Q54J54|Q54J54_DICDI DUF1649 family protein
OS=Dictyostelium discoideum GN=DDB_0187874 PE=4
SV=1,30,2e-18,DUF1649,Autophagy-related protein 1010; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,Autophagy-related ,CUFF.48102.1
         (218 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g21590.1                                                       409   e-114

>Glyma17g21590.1 
          Length = 218

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/218 (88%), Positives = 200/218 (91%)

Query: 1   MNCEVCQLKELEVEHFEIREILRCILHTVVFHRALGLVRPKDVDMELFDVTYVQCGXXXX 60
           MNCEVCQLKELE+EHFEIRE+LRCILHT+VFHRALGLVRPKDVD+ELFDVTYVQCG    
Sbjct: 1   MNCEVCQLKELELEHFEIREVLRCILHTIVFHRALGLVRPKDVDLELFDVTYVQCGEAEL 60

Query: 61  XXXXXXXXXQFICWVEKHPNKKSQICLSFYEVKNKQVSWFSNKIERLYWEQWYINLNVAQ 120
                    QF+CWVEKHPNKKSQICLSFYEVKNKQ SWFSNKIERLYWEQWYINLNVAQ
Sbjct: 61  EKKIDEKIEQFVCWVEKHPNKKSQICLSFYEVKNKQASWFSNKIERLYWEQWYINLNVAQ 120

Query: 121 HQKAHSSKSHLSKVVDPGEGALEDRNARSATLEASLREVLFQIIKFVNEKKDHVPPIPNL 180
           H KAHSSK H SKVVDPGEGALEDRNARSA LEASLREVLFQIIKFVNEKKDHVPPIPNL
Sbjct: 121 HPKAHSSKYHHSKVVDPGEGALEDRNARSAALEASLREVLFQIIKFVNEKKDHVPPIPNL 180

Query: 181 EGAISFPYEITIPSSSDSAFGMDMIKRMLQTGHPTMLS 218
           EGA+SFPYEITIPSSSDSAFGMDMIKRMLQTGHPTMLS
Sbjct: 181 EGAVSFPYEITIPSSSDSAFGMDMIKRMLQTGHPTMLS 218