Miyakogusa Predicted Gene

Lj4g3v0804500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0804500.1 Non Chatacterized Hit- tr|I1K283|I1K283_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,72.92,0.00000002,
,NODE_45623_length_1178_cov_19.471138.path2.1
         (47 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g21320.1                                                        63   7e-11
Glyma17g18240.1                                                        58   2e-09

>Glyma05g21320.1 
          Length = 319

 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 38/48 (79%), Gaps = 3/48 (6%)

Query: 1  MGNSSKD-DSATSGDASAGDGDVQPSKPPIYTEGEKVLAHHVSRFYEA 47
          MGNSSKD DSATS DASAGD  VQPS   +Y+EGEKVLA+H  R YEA
Sbjct: 1  MGNSSKDNDSATSADASAGD--VQPSNSAVYSEGEKVLAYHGPRIYEA 46


>Glyma17g18240.1 
          Length = 369

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 3/48 (6%)

Query: 1  MGNSSKD-DSATSGDASAGDGDVQPSKPPIYTEGEKVLAHHVSRFYEA 47
          MGNSSKD DSATS DASAGD  + PS   +Y+EGEKVLA+H  R YEA
Sbjct: 20 MGNSSKDNDSATSADASAGD--IPPSNSGVYSEGEKVLAYHGPRIYEA 65