Miyakogusa Predicted Gene
- Lj4g3v0783230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0783230.1 tr|Q84LR0|Q84LR0_SOLLC Metal transporter
OS=Solanum lycopersicum GN=NRAMP3 PE=2 SV=1,73.33,2e-19,Nramp,Natural
resistance-associated macrophage protein; NATURAL
RESISTANCE-ASSOCIATED MACROPHAGE PRO,CUFF.48044.1
(61 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g39790.1 108 1e-24
Glyma11g05500.1 108 2e-24
Glyma17g18010.1 107 4e-24
Glyma05g21780.1 105 8e-24
Glyma06g04720.1 98 2e-21
Glyma04g04660.1 98 2e-21
Glyma16g03090.1 95 2e-20
Glyma07g06490.1 95 2e-20
Glyma06g12190.1 60 6e-10
Glyma15g00590.1 59 1e-09
Glyma13g44710.1 59 2e-09
Glyma07g02680.1 54 4e-08
Glyma08g23320.1 54 5e-08
>Glyma01g39790.1
Length = 507
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCREEYPTWAR+VLW M EV LIG+DIQEVIGSAIAIR+LSNGV+PLWAGVVITA D
Sbjct: 111 LAELCREEYPTWARIVLWLMTEVALIGADIQEVIGSAIAIRILSNGVVPLWAGVVITAFD 170
>Glyma11g05500.1
Length = 506
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 56/60 (93%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCREEYPTWAR+VLW M E+ LIG+DIQEVIGSAIAIR+LSNGV+PLWAGVVITA D
Sbjct: 111 LAELCREEYPTWARIVLWLMTEIALIGADIQEVIGSAIAIRILSNGVVPLWAGVVITAFD 170
>Glyma17g18010.1
Length = 516
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 57/60 (95%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCREEYP WAR+VLW MAE+ LIGSDIQEVIGSAIAIR+LS+GV+PLWAGVVITALD
Sbjct: 120 LAELCREEYPPWARIVLWIMAELALIGSDIQEVIGSAIAIRILSHGVVPLWAGVVITALD 179
>Glyma05g21780.1
Length = 516
Score = 105 bits (263), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCREEYP WAR VLW MAE+ LIGSDIQEVIGSAIAIR+LS+GV+PLWAGVVITALD
Sbjct: 120 LAELCREEYPPWARRVLWIMAELALIGSDIQEVIGSAIAIRILSHGVVPLWAGVVITALD 179
>Glyma06g04720.1
Length = 522
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 53/60 (88%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCR+EYP WAR+VLW MAE+ LIG+DIQEVIGSAIAI++LS G PLWAGV+ITA D
Sbjct: 126 LAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGFFPLWAGVLITASD 185
>Glyma04g04660.1
Length = 518
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 53/60 (88%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCR+EYP WAR+VLW MAE+ LIG+DIQEVIGSAIAI++LS G PLWAGV+ITA D
Sbjct: 122 LAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGFFPLWAGVLITASD 181
>Glyma16g03090.1
Length = 524
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 55/60 (91%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCREEY WAR+VLW +AE+ LI +DIQEVIGSAIA+++LS+G++P+WAGV+ITA+D
Sbjct: 147 LAELCREEYSNWARLVLWILAELALIAADIQEVIGSAIALKILSHGILPIWAGVIITAMD 206
>Glyma07g06490.1
Length = 492
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 55/60 (91%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AELCREEY WAR+VLW +AE+ LI +DIQEVIGSAIA+++LS+G++P+WAGV+ITA+D
Sbjct: 93 LAELCREEYSNWARLVLWILAELALIAADIQEVIGSAIALKILSHGLLPIWAGVIITAMD 152
>Glyma06g12190.1
Length = 544
Score = 60.1 bits (144), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITA 58
++ELC+ EYP + LW +AE+ +I +DI EVIG+A A+ +L + +P+WAGV+IT
Sbjct: 113 LSELCKAEYPLLVKYCLWLLAELAVIAADIPEVIGTAFALNILFH--IPVWAGVLITG 168
>Glyma15g00590.1
Length = 496
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AE CR EYP +LW +AE+ ++ DI EVIG+A A+ +L N +P+W GV++T L
Sbjct: 60 LAEHCRSEYPRVPNFILWIIAEIAIVACDIPEVIGTAFALNMLFN--IPVWIGVLLTGLS 117
>Glyma13g44710.1
Length = 494
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITALD 60
+AE CR EYP +LW +AE+ ++ DI EVIG+A A+ +L N +P+W GV++T L
Sbjct: 60 LAEHCRAEYPRVPNFILWIIAEIAIVACDIPEVIGTAFALNMLFN--IPVWIGVLLTGLS 117
>Glyma07g02680.1
Length = 447
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITAL 59
+AE CR EY +LW +AE+ ++ DI EVIG+A A+ +L N +P+W GV++T
Sbjct: 13 LAEHCRAEYSRVPNFILWVIAEIAIVACDIPEVIGTAFALNMLFN--IPVWVGVLLTGF 69
>Glyma08g23320.1
Length = 550
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 1 MAELCREEYPTWARMVLWAMAEVNLIGSDIQEVIGSAIAIRVLSNGVMPLWAGVVITA 58
+AE CR EY +LW +AE+ ++ DI EVIG+A A+ +L N +P+W GV++T
Sbjct: 111 LAEHCRAEYSRVPNFILWVIAEIAVVACDIPEVIGTAFALNMLFN--IPVWIGVLLTG 166