Miyakogusa Predicted Gene

Lj4g3v0771140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0771140.1 Non Chatacterized Hit- tr|Q2QZQ1|Q2QZQ1_ORYSJ
Retrotransposon protein, putative, Ty3-gypsy subclass
,31.88,0.00000000000002,POPLD,POPLD,CUFF.48051.1
         (392 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g29980.1                                                       502   e-142
Glyma16g07720.1                                                       498   e-141
Glyma16g11170.1                                                       315   8e-86

>Glyma15g29980.1 
          Length = 840

 Score =  502 bits (1292), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 249/352 (70%), Positives = 276/352 (78%), Gaps = 14/352 (3%)

Query: 41  WSIILPLSWVKAFWIPLISNGAHAIGLREKHWIACEIELPSFHSDFPDCKAYSCEMAAKD 100
           WS+ILPLSWVKAFWIPLISNGAHAIGL+EKHWI+CE+ LP F SD PDCKAYSC M AK 
Sbjct: 503 WSVILPLSWVKAFWIPLISNGAHAIGLQEKHWISCEMGLPFFPSDSPDCKAYSCLMEAKA 562

Query: 101 AVFNKKEELRQPSVRHFKVPIVPPWGIVRTTFNKEISAMDTLDLSTREDLTSANSLPISF 160
           A FNKKEELR P +RH +VPI+PPWGI             T DLSTREDLT+ANSLP   
Sbjct: 563 AAFNKKEELRPPVIRHLRVPILPPWGI-------------THDLSTREDLTNANSLPNPC 609

Query: 161 SGSSKISNFNCMNNSFDGTIARTGNMLTTFINETKAGQLLLFPHVAEGKDIISKFIKGEQ 220
            G+ +I N +  +NSFDGT+ RTG MLTTF+NETK GQLLLFP+ A+GK  ISKFI GE 
Sbjct: 610 HGNFEIFNSDSGSNSFDGTVVRTGCMLTTFLNETKTGQLLLFPYAADGKARISKFINGEL 669

Query: 221 NLDLMHKSSVIYDHKLCFLRVILHPFKEGFFEEGAVICAPCLSDISMWTXXXXXXXXXXX 280
            LD  H+SS IYDHKLCF+RV L PFKEG FEEGAVICAP  SDIS+WT           
Sbjct: 670 KLDPRHRSSDIYDHKLCFVRVHLRPFKEGCFEEGAVICAPYPSDISLWTSSCEKREEGLQ 729

Query: 281 XXXXAMKLYFKEHSSGKWGMQIPEDSIARASHRWPIGFVTTASVQGSKRLVAEGFCEAVL 340
               AM+LYFKEHSSGKWGMQIP+DSIA  S RWPIGFVTTASVQGSK LVAEGFCEAVL
Sbjct: 730 MSQSAMRLYFKEHSSGKWGMQIPDDSIASKSQRWPIGFVTTASVQGSKSLVAEGFCEAVL 789

Query: 341 LSHLREEQWKEMPVKQRRREIYVLVWNLRSVAYRLALASVVLENQKTDVEFF 392
           LSHLREEQWKEMP+K +RREIYVLV NL S AYRLALAS+VLENQ+ D++F 
Sbjct: 790 LSHLREEQWKEMPMK-KRREIYVLVRNLGSTAYRLALASIVLENQENDIDFL 840


>Glyma16g07720.1 
          Length = 885

 Score =  498 bits (1283), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 253/352 (71%), Positives = 284/352 (80%), Gaps = 1/352 (0%)

Query: 41  WSIILPLSWVKAFWIPLISNGAHAIGLREKHWIACEIELPSFHSDFPDCKAYSCEMAAKD 100
           WS+ILPLSWVKAFWIPLISNGAHAIGL+EK+WI+CE+ LP F SDFPDCKAYSC M AK 
Sbjct: 535 WSVILPLSWVKAFWIPLISNGAHAIGLQEKNWISCEMGLPFFPSDFPDCKAYSCLMEAKA 594

Query: 101 AVFNKKEELRQPSVRHFKVPIVPPWGIVRTTFNKEISAMDTLDLSTREDLTSANSLPISF 160
           A FNKK EL     RH +VPI+PPWGIVR TF+K I+AM+T DLSTREDL +ANSLP   
Sbjct: 595 AAFNKKAELCPLVTRHLRVPILPPWGIVRITFDKVINAMETPDLSTREDLINANSLPNPC 654

Query: 161 SGSSKISNFNCMNNSFDGTIARTGNMLTTFINETKAGQLLLFPHVAEGKDIISKFIKGEQ 220
            G+ +IS  +  +NSFDGT+ RTG MLTTF+NETK  QLLLFP+ A+GK  ISKFI GE 
Sbjct: 655 HGNFEISKSDSGSNSFDGTVVRTGCMLTTFLNETKTCQLLLFPYAADGKARISKFINGEL 714

Query: 221 NLDLMHKSSVIYDHKLCFLRVILHPFKEGFFEEGAVICAPCLSDISMWTXXXXXXXXXXX 280
            LD  H+SS IYDHK CF+RV L+PFKEG FEEGAVICAP  SDIS+WT           
Sbjct: 715 KLDPRHRSSDIYDHKQCFVRVHLNPFKEGCFEEGAVICAPYPSDISLWTSSCEKREEGLQ 774

Query: 281 XXXXAMKLYFKEHSSGKWGMQIPEDSIARASHRWPIGFVTTASVQGSKRLVAEGFCEAVL 340
               AM+LYFKEHSSGKWGMQIP+DSIAR SHRWPIGFVTTASVQGSK LVAEGFCEAVL
Sbjct: 775 MSQSAMRLYFKEHSSGKWGMQIPDDSIARMSHRWPIGFVTTASVQGSKSLVAEGFCEAVL 834

Query: 341 LSHLREEQWKEMPVKQRRREIYVLVWNLRSVAYRLALASVVLENQKTDVEFF 392
           LS+LREEQWKEMP+K +RREIYVLV NLRS AYRLALAS+VLE Q+ D+EF 
Sbjct: 835 LSNLREEQWKEMPMK-KRREIYVLVRNLRSTAYRLALASIVLEYQENDIEFL 885


>Glyma16g11170.1 
          Length = 391

 Score =  315 bits (806), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 174/344 (50%), Positives = 201/344 (58%), Gaps = 103/344 (29%)

Query: 41  WSIILPLSWVKAFWIPLISNGAHAIGLREKHWIACEIELPSFHSDFPDCKAYSCEMAAKD 100
           WS+ILPLSW+KAFWI LISNGA+AI                   DFPDCKAY+C M AK 
Sbjct: 151 WSVILPLSWIKAFWILLISNGAYAI-------------------DFPDCKAYTCFMEAKA 191

Query: 101 AVFNKKEELRQPSVRHFKVPIVPPWGIVRTTFNKEISAMDTLDLSTREDLTSANSLPISF 160
             F +  EL  PS+RH +VPI+PPWGIVR TFNK                          
Sbjct: 192 TAFIQNAELHPPSIRHLRVPILPPWGIVRITFNK-------------------------- 225

Query: 161 SGSSKISNFNCMNNSFDGTIARTGNMLTTFINETKAGQLLLFPHVAEGKDIISKFIKGEQ 220
                              I RTG MLTTF+N+TK GQLLLFP+ A+GK  +SKFI  E 
Sbjct: 226 ------------------WIIRTGCMLTTFLNKTKTGQLLLFPYEADGKARMSKFINSEL 267

Query: 221 NLDLMHKSSVIYDHKLCFLRVILHPFKEGFFEEGAVICAPCLSDISMWTXXXXXXXXXXX 280
            LD  H+ S IYDHKLCF+RV LHPFKEG FEEGAVIC                      
Sbjct: 268 KLDQRHRKSDIYDHKLCFVRVHLHPFKEGCFEEGAVICM--------------------- 306

Query: 281 XXXXAMKLYFKEHSSGKWGMQIPEDSIARASHRWPIGFVTTASVQGSKRLVAEGFCEAVL 340
                               +I +DSI+  SHRWPIGFVTTASVQGSK L+AEGFCEA +
Sbjct: 307 ------------------DFKILDDSISIKSHRWPIGFVTTASVQGSKSLLAEGFCEAAV 348

Query: 341 LSHLREEQWKEMPVKQRRREIYVLVWNLRSVAYRLALASVVLEN 384
           LSHLREEQWKEMP+K +RREIY+L+ NLRS AYRLALAS++LE+
Sbjct: 349 LSHLREEQWKEMPMK-KRREIYILIKNLRSTAYRLALASIILEH 391