Miyakogusa Predicted Gene

Lj4g3v0770770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0770770.1 Non Chatacterized Hit- tr|D7MV47|D7MV47_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,37.56,5e-18,seg,NULL,CUFF.48021.1
         (193 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g22210.2                                                       228   3e-60
Glyma05g22210.1                                                       228   3e-60
Glyma17g17760.1                                                       226   9e-60
Glyma11g05310.1                                                       179   1e-45
Glyma17g17760.2                                                       152   2e-37
Glyma15g20790.1                                                       116   1e-26
Glyma01g39980.1                                                       108   5e-24
Glyma02g12630.1                                                        52   3e-07
Glyma07g35370.1                                                        50   1e-06
Glyma20g03340.1                                                        50   1e-06
Glyma13g00800.1                                                        50   2e-06

>Glyma05g22210.2 
          Length = 208

 Score =  228 bits (580), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/215 (61%), Positives = 141/215 (65%), Gaps = 29/215 (13%)

Query: 1   MEKPIRSCDKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEARRGIEVS----YF 56
           MEK +RSCDKEYMRMAMLKHEETFKEQVYELHRLY+IQKILM+NM+ARRGIEV+    YF
Sbjct: 1   MEKLVRSCDKEYMRMAMLKHEETFKEQVYELHRLYQIQKILMQNMDARRGIEVTKEEWYF 60

Query: 57  NNAISLTQNGNHKGAQEKPQIKFDLEQPAEEHFAESEDGVXXXXXXXXXXXXXGPSSYNR 116
            NAI LT     KGAQEKPQ+K DLE+PAEEH AESEDGV              PSSYNR
Sbjct: 61  KNAIGLT----CKGAQEKPQMKIDLERPAEEHIAESEDGVLEVIDETEIELTLAPSSYNR 116

Query: 117 GRKKVETPXXXXXXXXXXXXXXXXXXRNKITRYNTHHRTREES----------------- 159
            RKKVETP                   NK TR +  H TRE S                 
Sbjct: 117 -RKKVETPLTSDSGHSLSSSSSGSSHVNK-TRCHGTHTTRENSSGSIIRLVEVPGSTPAY 174

Query: 160 -SGIRNSFHIEEQLRSQERLKQSPWLFQVLNLNMT 193
            SGIRNSF IEEQLR QERLKQSPWLFQVLNLNMT
Sbjct: 175 QSGIRNSFDIEEQLR-QERLKQSPWLFQVLNLNMT 208


>Glyma05g22210.1 
          Length = 208

 Score =  228 bits (580), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/215 (61%), Positives = 141/215 (65%), Gaps = 29/215 (13%)

Query: 1   MEKPIRSCDKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEARRGIEVS----YF 56
           MEK +RSCDKEYMRMAMLKHEETFKEQVYELHRLY+IQKILM+NM+ARRGIEV+    YF
Sbjct: 1   MEKLVRSCDKEYMRMAMLKHEETFKEQVYELHRLYQIQKILMQNMDARRGIEVTKEEWYF 60

Query: 57  NNAISLTQNGNHKGAQEKPQIKFDLEQPAEEHFAESEDGVXXXXXXXXXXXXXGPSSYNR 116
            NAI LT     KGAQEKPQ+K DLE+PAEEH AESEDGV              PSSYNR
Sbjct: 61  KNAIGLT----CKGAQEKPQMKIDLERPAEEHIAESEDGVLEVIDETEIELTLAPSSYNR 116

Query: 117 GRKKVETPXXXXXXXXXXXXXXXXXXRNKITRYNTHHRTREES----------------- 159
            RKKVETP                   NK TR +  H TRE S                 
Sbjct: 117 -RKKVETPLTSDSGHSLSSSSSGSSHVNK-TRCHGTHTTRENSSGSIIRLVEVPGSTPAY 174

Query: 160 -SGIRNSFHIEEQLRSQERLKQSPWLFQVLNLNMT 193
            SGIRNSF IEEQLR QERLKQSPWLFQVLNLNMT
Sbjct: 175 QSGIRNSFDIEEQLR-QERLKQSPWLFQVLNLNMT 208


>Glyma17g17760.1 
          Length = 208

 Score =  226 bits (577), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 135/216 (62%), Positives = 141/216 (65%), Gaps = 31/216 (14%)

Query: 1   MEKPIRS-CDKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEARRGIEVS----Y 55
           MEK +RS C+KEYMRMAMLKHEETFKEQVYELHRLYRIQKILM+NMEARRGIE S    +
Sbjct: 1   MEKLVRSSCNKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMQNMEARRGIEASEEEWH 60

Query: 56  FNNAISLTQNGNHKGAQEKPQIKFDLEQPAEEHFAESEDGVXXXXXXXXXXXXXGPSSYN 115
           F N I LT    HKGAQEKPQIKFDLE PAEEH AESEDGV             GPSSYN
Sbjct: 61  FKNGIGLT----HKGAQEKPQIKFDLESPAEEHIAESEDGVLEVIDETEIELTLGPSSYN 116

Query: 116 RGRKKVETPXXXXXXXXXXXXXXXXXXRNKITRYNTHHRTREES---------------- 159
           R RKKVETP                   NK   + +H  TREES                
Sbjct: 117 R-RKKVETPLTSDSGHSLSSSSSGSSHVNKTRCHGSH--TREESSGSIIRLVQVPGSTPG 173

Query: 160 --SGIRNSFHIEEQLRSQERLKQSPWLFQVLNLNMT 193
             SGIRNSF IEEQLR QERLKQSPWLFQVLNLNMT
Sbjct: 174 YQSGIRNSFDIEEQLR-QERLKQSPWLFQVLNLNMT 208


>Glyma11g05310.1 
          Length = 187

 Score =  179 bits (454), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/191 (54%), Positives = 114/191 (59%), Gaps = 9/191 (4%)

Query: 1   MEKPIRSCDKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEARRGIEVSY----F 56
           MEK IR CDKEYMRM MLKH++TFKEQVYELHRLYRIQKILMKNMEAR GIEV+      
Sbjct: 1   MEKLIRPCDKEYMRMTMLKHQDTFKEQVYELHRLYRIQKILMKNMEARSGIEVNQRGWNL 60

Query: 57  NNAISLTQNGNHKGAQEKPQIKFDLEQPAEEHFAESE-DGVXXXXXXXXXXXXXGPSSYN 115
            N ISLTQNG+H GAQ+ P + FDLE PA+E  AES+ DGV             GPSSY 
Sbjct: 61  KNVISLTQNGSHNGAQKNPILNFDLESPAKEDNAESDSDGVLEITNETEIELTLGPSSYK 120

Query: 116 RGRKKVETPXXXXXXXXXXXXXXXXXXRNKITRYNTHHRTREESSGIRNSFHIEEQLRSQ 175
             RK VETP                     I      H T    SGIRNS+  EEQ R  
Sbjct: 121 --RKIVETPLTSDSAHSFYSTVEELSG-GLIGLVQVPHSTAGCQSGIRNSYDFEEQSRD- 176

Query: 176 ERLKQSPWLFQ 186
           ERL Q PW FQ
Sbjct: 177 ERLNQPPWFFQ 187


>Glyma17g17760.2 
          Length = 166

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/174 (55%), Positives = 101/174 (58%), Gaps = 30/174 (17%)

Query: 42  MKNMEARRGIEVS----YFNNAISLTQNGNHKGAQEKPQIKFDLEQPAEEHFAESEDGVX 97
           M+NMEARRGIE S    +F N I LT    HKGAQEKPQIKFDLE PAEEH AESEDGV 
Sbjct: 1   MQNMEARRGIEASEEEWHFKNGIGLT----HKGAQEKPQIKFDLESPAEEHIAESEDGVL 56

Query: 98  XXXXXXXXXXXXGPSSYNRGRKKVETPXXXXXXXXXXXXXXXXXXRNKITRYNTHHRTRE 157
                       GPSSYNR RKKVETP                   NK   + +H  TRE
Sbjct: 57  EVIDETEIELTLGPSSYNR-RKKVETPLTSDSGHSLSSSSSGSSHVNKTRCHGSH--TRE 113

Query: 158 ES------------------SGIRNSFHIEEQLRSQERLKQSPWLFQVLNLNMT 193
           ES                  SGIRNSF IEEQLR QERLKQSPWLFQVLNLNMT
Sbjct: 114 ESSGSIIRLVQVPGSTPGYQSGIRNSFDIEEQLR-QERLKQSPWLFQVLNLNMT 166


>Glyma15g20790.1 
          Length = 148

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 92/192 (47%), Gaps = 47/192 (24%)

Query: 1   MEKPIRSCDKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEARRGIEVSYFNNAI 60
           MEK IR C+KEYMR+ MLKH++TFKE VYELHRLYRIQ ILMKNMEA RG E++      
Sbjct: 1   MEKLIRPCNKEYMRITMLKHQDTFKEHVYELHRLYRIQNILMKNMEATRGNELN------ 54

Query: 61  SLTQNGNHKGAQEKPQIKFDLEQPAEEHFAESE-DGVXXXXXXXXXXXXXGPSSYNRGRK 119
                             FDLE+PA+E  AE++ DGV              P SY   RK
Sbjct: 55  ------------------FDLERPAKEDMAEADSDGVLDVINETEIELTLRPLSY--KRK 94

Query: 120 KVETPXXXXXXXXXXXXXXXXXXRNKITRYNTHHRTREESSGIRNSFHIEEQLRSQERLK 179
           KVETP                   NK TR  T                   Q    +R K
Sbjct: 95  KVETPLTSDLAHSLSFSSTGSSLINK-TRLKT-------------------QQSRDDRTK 134

Query: 180 QSPWLFQVLNLN 191
           Q PW FQVL+LN
Sbjct: 135 QPPWFFQVLSLN 146


>Glyma01g39980.1 
          Length = 174

 Score =  108 bits (269), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 90/175 (51%), Gaps = 28/175 (16%)

Query: 42  MKNMEARRGIEVSY----FNNAISLTQNGNHKGAQEKPQIKFDLEQPAEEHFAESE-DGV 96
           MKNMEA RG EV+       N ISLTQNG HKGAQ+ P++ FDLE+PA+E  AE++ DGV
Sbjct: 1   MKNMEATRGNEVNQRGWNLKNVISLTQNGYHKGAQQNPKLNFDLERPAKEDMAEADSDGV 60

Query: 97  XXXXXXXXXXXXXGPSSYNRGRKKVETPXXXXXXXXXXXXXXXXXXRNKI---TRYNTH- 152
                        GPSSY   RKKVETP                   NK    TR++++ 
Sbjct: 61  LEVINETEIELTLGPSSYK--RKKVETPLTSDSAHRLSSSSTGSSLINKTRLKTRHSSYS 118

Query: 153 ----------------HRTREESSGIRNSFHIEEQLRSQERLKQSPWLFQVLNLN 191
                           H T    SGIR S+ IEE+ R  ER KQ PW FQVL+LN
Sbjct: 119 AAEELSGGLIGLVHVRHSTAGCQSGIRRSYEIEERSR-DERTKQPPWFFQVLSLN 172


>Glyma02g12630.1 
          Length = 1081

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 27/34 (79%)

Query: 9  DKEYMRMAMLKHEETFKEQVYELHRLYRIQKILM 42
          DK+ ++  ML+HE  FK QVYELHRLYRIQ+ LM
Sbjct: 57 DKDVVKQMMLEHEAVFKNQVYELHRLYRIQRDLM 90


>Glyma07g35370.1 
          Length = 1080

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 30/40 (75%)

Query: 9  DKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEAR 48
          DK+ ++  ML+HE  FK QV+ELHRLYR+Q+ LM  ++ +
Sbjct: 57 DKDNLKQTMLEHEAIFKNQVFELHRLYRVQRDLMDEVKMK 96


>Glyma20g03340.1 
          Length = 890

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 30/40 (75%)

Query: 9  DKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEAR 48
          DK+ ++  ML+HE  FK QV+ELHRLYRIQ+ LM  ++ +
Sbjct: 57 DKDNVKQTMLEHEAIFKNQVFELHRLYRIQRDLMDEVKMK 96


>Glyma13g00800.1 
          Length = 265

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 22/117 (18%)

Query: 1   MEKPIRSCDKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEAR-RGIEVSYFNNA 59
           M++ +   + +Y++  M +HE+ FK QV ELHR+Y +QK+LM +++   R  ++    N 
Sbjct: 48  MDRMLDRNNIQYIKKTMQRHEDIFKHQVRELHRVYSVQKMLMDDLKNEIRQQQIWNHMND 107

Query: 60  ISLTQNGNHKGAQEKPQIK--------------FDLEQPAEEH-------FAESEDG 95
           I+++   + K   +  QI               FDLE+PAEE        F E E G
Sbjct: 108 INVSHPHSIKQQHQTTQISHQPDFHVQNLRGRGFDLERPAEEDIFIRARGFDEGEAG 164