Miyakogusa Predicted Gene
- Lj4g3v0768700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0768700.1 tr|Q8S3Q2|Q8S3Q2_ORYSJ OSJNBa0011F23.5 protein
OS=Oryza sativa subsp. japonica GN=24K23.4 PE=4
SV=1,28.04,7e-19,SAGA-Tad1,Transcriptional coactivator SAGA-type
complex, Ada1/Tada1; SUBFAMILY NOT NAMED,NULL; FAMIL,CUFF.48018.1
(307 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g17720.1 392 e-109
Glyma05g22170.1 278 6e-75
Glyma10g40470.1 213 2e-55
Glyma20g26860.1 212 3e-55
Glyma04g07970.1 155 7e-38
Glyma06g08020.1 152 4e-37
Glyma14g17620.1 147 1e-35
Glyma17g29280.2 140 1e-33
Glyma17g29280.1 140 3e-33
>Glyma17g17720.1
Length = 327
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/314 (69%), Positives = 250/314 (79%), Gaps = 18/314 (5%)
Query: 12 TLEQKLQIERKLGTVKACKYFNLLTRFLSVKISKHEFDRQCRATIGRENIHLHNHFIRSI 71
T+EQKLQIER+LG+VK KYFNLL RFLS KISKHEFDR C ATIGREN+ LHNHF++SI
Sbjct: 1 TIEQKLQIERRLGSVKTRKYFNLLERFLSFKISKHEFDRVCIATIGRENVPLHNHFLKSI 60
Query: 72 LKKASLSK----RGNIIGSSLNVKIPNGCNDLQFLCKDFLQSPRKVRTPSLRDRRFKDRP 127
L+KA LSK R + + SSLNVK PNGC++LQ LCKDF QSPRK RTP+LRDRR +DRP
Sbjct: 61 LRKACLSKTAGSRESKVESSLNVKTPNGCSNLQILCKDFPQSPRKGRTPNLRDRRSRDRP 120
Query: 128 SPLGPNGKNVNIGFEDSVREIHEQQSNKELDSAASRIPLCVEDGEEVDQDSEKVNIYMRS 187
SPLGPNGKN +IG EDSV +IHEQQS L SA SR+PL VEDGEEVDQD E +N++ +S
Sbjct: 121 SPLGPNGKNNSIGCEDSVPKIHEQQSILNLQSAGSRLPLSVEDGEEVDQDYEILNLFKKS 180
Query: 188 PIQPPLAIPTYNKGTR-TLLHNGLPSGT--DTCQSIGELPDTPSLTKRLEQKLEMEGFKI 244
PIQ PLAIPTYN+ + L GL SGT DTCQSI +LPDT SLTKRLEQKLE+EG KI
Sbjct: 181 PIQAPLAIPTYNRRPQPKYLSQGLSSGTVSDTCQSIAQLPDTCSLTKRLEQKLEIEGLKI 240
Query: 245 SADAAALMNKALDTYLKRLIKPCLDLAASKAVNRSNGPIQPGLNE-----------QIGS 293
S DAA+L+N ALD YLKRLIKPCLDLAASK+VN+ +GPIQPGLNE + S
Sbjct: 241 STDAASLLNNALDVYLKRLIKPCLDLAASKSVNKFSGPIQPGLNELPLRRCVQKPIRSAS 300
Query: 294 VSVSDFRTATELNP 307
VS+SDFRTA ELNP
Sbjct: 301 VSISDFRTAVELNP 314
>Glyma05g22170.1
Length = 242
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 148/221 (66%), Positives = 170/221 (76%), Gaps = 14/221 (6%)
Query: 101 FLCKDFLQSPRKVRTPSLRDRRFKDRPSPLGPNGKNVNIGFEDSVREIHEQQSNKELDSA 160
LCKDF QSPRK RTP+LRDR+ +DRP P GP+GKN +IGFEDS+ +IHEQQS L SA
Sbjct: 1 MLCKDFPQSPRKGRTPNLRDRKSRDRPCPFGPHGKNNSIGFEDSIPKIHEQQSIVNLQSA 60
Query: 161 ASRIPLCVEDGEEVDQDSEKVNIYMRSPIQPPLAIPTYN-KGTRTLLHNGLPSGT--DTC 217
SR+ L VEDGEE+DQD E +N++ +SPIQ PLAIPTYN + + L GL SGT DTC
Sbjct: 61 GSRLALSVEDGEEIDQDYEILNLFKKSPIQAPLAIPTYNRRPPQKHLSQGLSSGTVSDTC 120
Query: 218 QSIGELPDTPSLTKRLEQKLEMEGFKISADAAALMNKALDTYLKRLIKPCLDLAASKAVN 277
QSI +LPDT SL KRLEQKLE+EG KIS DAA+L+N ALD YLKRLIKPCLDLAASK VN
Sbjct: 121 QSIAQLPDTCSLMKRLEQKLEIEGLKISTDAASLLNNALDVYLKRLIKPCLDLAASKLVN 180
Query: 278 RSNGPIQPGLNE---------QIG--SVSVSDFRTATELNP 307
+ +GPIQPGLNE IG SVS+SDFRTA ELNP
Sbjct: 181 KFSGPIQPGLNELPMRRCVQKSIGSPSVSISDFRTAVELNP 221
>Glyma10g40470.1
Length = 354
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/327 (44%), Positives = 188/327 (57%), Gaps = 27/327 (8%)
Query: 7 FSPVDTLEQKLQIERKLGTVKACKYFNLLTRFLSVKISKHEFDRQCRATIGRENIHLHNH 66
FS +DTLE K I RK+G +A KYF+ L R LS KISK EF R C IGRENI LHN
Sbjct: 8 FSRIDTLELKALIVRKVGRQRADKYFDQLRRLLSSKISKSEFYRICTVIIGRENIPLHNR 67
Query: 67 FIRSILKKASLSK----RGNI-IGSSLNVKIPNGC--NDLQFLCKD-FLQSPRKVRTPSL 118
IR+ILK A L+K RG+ +GS+ +VK NG +Q L + F S R++ + +
Sbjct: 68 LIRAILKNACLAKVPPVRGSARVGSATSVKDSNGSQRGSIQSLFGEAFPPSMRRISSLAA 127
Query: 119 RDRRFKDRPSPLGPNGK-NVNIGFEDSVREIHEQQSNKELDSAASRIPLCVEDGEEVDQD 177
RD RFK R + GP GK + + E+ V + EQQS EL+S SR P+ VE+GEEV+Q
Sbjct: 128 RDHRFKGRQNAFGPLGKPHFGLASEELVYKTLEQQSATELNSLGSRPPISVEEGEEVEQM 187
Query: 178 SEKVNIYMRSPIQPPLAIPTYNKGTRTLLHNGLPSGT--DTCQSIGELPDTPSLTKRLEQ 235
+ +I RSP+ PL + + + G R + L S +TC S G LPDT SL RLEQ
Sbjct: 188 AGSPSIQSRSPVTAPLGV-SMHFGRRLHFNVSLCSKDYPETCHSNGSLPDTRSLRSRLEQ 246
Query: 236 KLEMEGFKISADAAALMNKALDTYLKRLIKPCLDLAASKAVNR-----------SNGPIQ 284
KLE EG + D+ L+N ALD YLKRLI+ +DLA S+ N S+ +
Sbjct: 247 KLEKEGLTATVDSVNLLNNALDLYLKRLIESFMDLAGSRFGNEHLRQQNRQLGTSSNVLL 306
Query: 285 PGLNEQIG----SVSVSDFRTATELNP 307
PG Q S SV DFR A ELNP
Sbjct: 307 PGRCMQTATRSTSASVLDFRLAMELNP 333
>Glyma20g26860.1
Length = 356
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 187/329 (56%), Gaps = 29/329 (8%)
Query: 7 FSPVDTLEQKLQIERKLGTVKACKYFNLLTRFLSVKISKHEFDRQCRATIGRENIHLHNH 66
FS +DTLE K I RK+G +A KYF+ L R LS KISK EFDR C IGRENI LHN
Sbjct: 8 FSRIDTLELKALIVRKVGHQRADKYFDQLRRLLSSKISKSEFDRICTVIIGRENIPLHNR 67
Query: 67 FIRSILKKASLSK----RGNI-IGSSLNVKIPNGC---NDLQFLCKDFLQSPRKVRTPSL 118
IR+ILK A L+K RG+ +GS+ +VK NG + + F S R++ + +
Sbjct: 68 LIRAILKNACLAKVPPVRGSARVGSATSVKDSNGSQRGSAQSLFGEAFPPSMRRISSLAA 127
Query: 119 RDRRFKDRPSPLGPNGK-NVNIGFEDSVREIHEQQSNKELDSAASRIPLCVEDGEEVDQD 177
RD RFK R + GP GK + + E+ V + EQQS EL+S SR P+ VE+GEEV+Q
Sbjct: 128 RDCRFKGRHNAFGPLGKPHFGLASEELVYKTLEQQSATELNSLGSRPPISVEEGEEVEQM 187
Query: 178 SEKVNIYMRSPIQPPLAIPTYNKGTRTLLHNGLPSGT----DTCQSIGELPDTPSLTKRL 233
+ +I RSP+ PL + + N G LH+ + + +TC S G LPDT SL L
Sbjct: 188 AGSPSIQSRSPVTAPLGV-SMNFGRGRRLHSNVSLCSKDYPETCHSNGYLPDTRSLRNCL 246
Query: 234 EQKLEMEGFKISADAAALMNKALDTYLKRLIKPCLDLAASKAVNR-----------SNGP 282
EQKLE EG + D L+N ALD+YLKRLI+ +DLA S+ N S+
Sbjct: 247 EQKLEKEGLTATVDCVNLLNNALDSYLKRLIESFMDLAGSRFGNEHLRQQNRQLVTSSNV 306
Query: 283 IQPGLNEQI----GSVSVSDFRTATELNP 307
+ PG Q S SV DFR A ELNP
Sbjct: 307 LLPGRCMQTATRSASASVLDFRLAMELNP 335
>Glyma04g07970.1
Length = 419
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 174/395 (44%), Gaps = 98/395 (24%)
Query: 8 SPVDTLEQKLQIERKLGTVKACKYFNLLTRFLSVKISKHEFDRQCRATIGRENIHLHNHF 67
S +D E + QI +KLG K+ +YF L RFLS K+SK EFD+ C +GREN+ LHNHF
Sbjct: 7 SRIDLGELRAQIVKKLGADKSKRYFYYLNRFLSQKLSKTEFDKLCFRVLGRENLPLHNHF 66
Query: 68 IRSILKKASLSKRGNIIGSSLNVKIPNGCNDLQ----------------------FLCKD 105
I+SILK A +K I +K +D+
Sbjct: 67 IKSILKNACQAKTPPPIHPPDPLKSGEHASDMSPGREDGHEHSVASFQNQSQKAPVWSNG 126
Query: 106 FLQSPRKVRTPSLRDRRFKDRPSPLGPNGK--------------NVNIGFEDSVREIHEQ 151
FL + KVR+ +R+R+ +DRPSPLGPNGK + E+ +R +
Sbjct: 127 FLPASPKVRS-GVRERKLRDRPSPLGPNGKVDSVSHQIMGTEDCGSKVDMENGIRSPCDY 185
Query: 152 QSNKELDSAASRIP-------------------------LCVEDGEEVDQDSEKVNIYMR 186
Q + A + +P VEDGEEVDQ S + R
Sbjct: 186 QRPIQHLQAVAELPENERGDVVQKPAEKPRIHGKGPAEMSIVEDGEEVDQLSRLG--FSR 243
Query: 187 SPIQPPLAIPTYNK---GTRTLLHNGLPSGTDTCQSIGELPDTPSLTKRLEQKLEMEGF- 242
SP+ PL IP + G R L D+C G L DT +L +R+EQ ++G
Sbjct: 244 SPLIAPLGIPYCSASVGGARKTLPVSSAGDFDSCCDSGRLSDTDTLRRRMEQIAAVQGLG 303
Query: 243 KISADAAALMNKALDTYLKRLIKPCLDLAASKAVNRSNGPIQP----------------- 285
+S + A ++N LD YLKRLI+ C++L +++ N P+ P
Sbjct: 304 AVSMECANMLNSMLDVYLKRLIRSCVELVGTRSTNELRKPLAPKQQMQGKVINDMWPNNH 363
Query: 286 -------GLNEQI------GSVSVSDFRTATELNP 307
G E + SVS+ DF+ A ELNP
Sbjct: 364 LHVQCAGGSAEAVPEHRPPCSVSLHDFKVAMELNP 398
>Glyma06g08020.1
Length = 419
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 175/395 (44%), Gaps = 98/395 (24%)
Query: 8 SPVDTLEQKLQIERKLGTVKACKYFNLLTRFLSVKISKHEFDRQCRATIGRENIHLHNHF 67
S +D E + QI +KLG K+ +YF L RFLS K+SK EFD+ C +GREN+ LHNHF
Sbjct: 7 SRIDLGELRAQIVKKLGADKSKRYFYYLNRFLSQKLSKSEFDKLCFRVLGRENLPLHNHF 66
Query: 68 IRSILKKASLSKRGNIIGSSLNVKIPNGCNDLQ----------------------FLCKD 105
I+SILK A +K I +K +D+
Sbjct: 67 IKSILKNACQAKTPPPIHPPGPLKSGEHASDISPGREDGHEHSVASFQNQNQKAPIWSNG 126
Query: 106 FLQSPRKVRTPSLRDRRFKDRPSPLGPNGK-----NVNIGFEDS---------------- 144
FL + KVR+ +R+R+ +DRPSPLGPNGK + ++G EDS
Sbjct: 127 FLPASPKVRS-GVRERKLRDRPSPLGPNGKVDSVSHQSMGSEDSGSKVDMENGIRTPCDY 185
Query: 145 VREIHEQQSNKEL----DSAASRIPL--------------CVEDGEEVDQDSEKVNIYMR 186
R I Q+ EL A R P VEDGEEVDQ S + R
Sbjct: 186 QRPIQHLQAVAELPENERGDAVRRPTEKPRIRGKGPAEMSIVEDGEEVDQLSRLG--FSR 243
Query: 187 SPIQPPLAIPTYNK---GTRTLLHNGLPSGTDTCQSIGELPDTPSLTKRLEQKLEMEGF- 242
SP+ PL IP + G R L D C G L DT +L +R+EQ ++G
Sbjct: 244 SPLIAPLGIPYCSASVGGARKTLPVSSAGDFDNCCDSGRLSDTNTLQRRMEQIAAVQGLG 303
Query: 243 KISADAAALMNKALDTYLKRLIKPCLDLAASKAVNRSNGPIQP----------------- 285
+S + A ++N LD YLKRLI+ C++L +++ N P P
Sbjct: 304 AVSMECANMLNSMLDVYLKRLIRSCVELVGARSTNELRMPPAPKQQMQGKVINGMWPNNH 363
Query: 286 -------GLNEQI------GSVSVSDFRTATELNP 307
G E + SV + DF+ A ELNP
Sbjct: 364 LHVQCADGSAEGVPEHRPPCSVFLHDFKVAMELNP 398
>Glyma14g17620.1
Length = 418
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 179/394 (45%), Gaps = 97/394 (24%)
Query: 8 SPVDTLEQKLQIERKLGTVKACKYFNLLTRFLSVKISKHEFDRQCRATIGRENIHLHNHF 67
S ++ +E K QI +++G K+ +YF L RFLS K+SK EFDR C +GREN+ LHNHF
Sbjct: 7 SRINLVELKAQIVKRIGVDKSKRYFYYLNRFLSQKLSKAEFDRSCYRVLGRENLPLHNHF 66
Query: 68 IRSILKKASLSKRGNII--------GSSLNVKIPNGCNDLQFLCKDFLQ----------- 108
I+SILK A +K + G+ +N P + + +F
Sbjct: 67 IKSILKNACQAKTPPPVQLTGPPKSGALVNNLSPGREDGHEQSVANFQNQNASIWSNGVL 126
Query: 109 --SPRKVRTPSLRDRRFKDRPSPLGPNGKNVNIGFE---------------------DSV 145
SPRK R+ +RDR+ KDRPSPLGPNGK ++ + D
Sbjct: 127 PVSPRKSRS-GVRDRKLKDRPSPLGPNGKVDSVAHQSTATEESGSKVDMENGILTPCDYQ 185
Query: 146 REIHEQQSNKELDSAA---------------SRIPL---CVEDGEEVDQDSEKVNIYMRS 187
R + Q+ EL + P+ VEDGEEV+Q ++N + RS
Sbjct: 186 RSMQHLQAVDELPENGMGDVIQRPLEKPRIHGKGPIEVSIVEDGEEVEQ-LNRLN-FSRS 243
Query: 188 PIQPPLAIPTYNK---GTRTLLHNGLPSGTDTCQSIGELPDTPSLTKRLEQKLEMEGF-K 243
P+ PL IP G R L S +C G L DT +L +R+EQ + G
Sbjct: 244 PLIAPLGIPYCTASVGGARKALPVNSTSDFVSCCDSGRLSDTDTLRRRMEQITTVLGLGG 303
Query: 244 ISADAAALMNKALDTYLKRLIKPCLDLAASKAVNRS---------------NG------- 281
+S + A ++N LD YLKRLI+ C+DL +++ N NG
Sbjct: 304 VSRECANMLNNVLDVYLKRLIRSCVDLVGARSGNEPRKLPVSKQQIQGKVINGIWPNNHL 363
Query: 282 --PIQPGLNE------QIGSVSVSDFRTATELNP 307
P GL E SVS+ DF+ A ELNP
Sbjct: 364 HVPSAGGLAEPEPEHTPPHSVSLHDFKVAMELNP 397
>Glyma17g29280.2
Length = 420
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 161/337 (47%), Gaps = 67/337 (19%)
Query: 5 RYFSPVDTLEQKLQIERKLGTVKACKYFNLLTRFLSVKISKHEFDRQCRATIGRENIHLH 64
R S ++ +E K I +++G K+ +YF L +FLS K+SK EFDR C +GREN+ LH
Sbjct: 4 RLSSRINLVELKALIVKRIGADKSKRYFYYLNKFLSQKLSKTEFDRSCYRVLGRENLPLH 63
Query: 65 NHFIRSILKKASLSKRGNII--------GSSLNVKIPNGCNDLQFLCKDFLQ-------- 108
NHFI+SILK A +K + G+ +N P + + +F
Sbjct: 64 NHFIKSILKNACQAKTPPPVQLIGPPKSGALVNNVSPGREDGHEQSVANFQNQNTSIWSN 123
Query: 109 -----SPRKVRTPSLRDRRFKDRPSPLGPNGKNVNIGF-----EDS-------------- 144
SPRK R+ +RDR+ KDRPSPLGPNGK ++ EDS
Sbjct: 124 GVLPVSPRKSRS-GVRDRKLKDRPSPLGPNGKVDSVAHQSTATEDSGSKVDMENGILTPC 182
Query: 145 -----------VREIHEQQSNKELDSAASRIPL---------CVEDGEEVDQDSEKVNIY 184
V E+ E + A + + VEDGEEV+Q + +N +
Sbjct: 183 DYQRPMQHLQAVDELPENGMGDVIQRPAEKPRMHGKGPTEVSIVEDGEEVEQLNH-LN-F 240
Query: 185 MRSPIQPPLAIPTYNK---GTRTLLHNGLPSGTDTCQSIGELPDTPSLTKRLEQKLEMEG 241
RSP+ PL IP G R L +C G L DT +L +R+EQ ++G
Sbjct: 241 SRSPLIAPLGIPYCTASVGGARKALTVNSTGDFVSCCDSGRLSDTDTLRRRMEQIATVQG 300
Query: 242 F-KISADAAALMNKALDTYLKRLIKPCLDLAASKAVN 277
+S + A ++N LD YLKRLI+ C+DL +++ N
Sbjct: 301 LGGVSTECANMLNNVLDVYLKRLIRSCVDLVGARSGN 337
>Glyma17g29280.1
Length = 865
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 177/396 (44%), Gaps = 103/396 (26%)
Query: 10 VDTLEQKLQIERKLGTVKACKYFNLLTRFLSVKISKHEFDRQCRATIGRENIHLHNHFIR 69
++ +E K I +++G K+ +YF L +FLS K+SK EFDR C +GREN+ LHNHFI+
Sbjct: 454 INLVELKALIVKRIGADKSKRYFYYLNKFLSQKLSKTEFDRSCYRVLGRENLPLHNHFIK 513
Query: 70 SILKKASLSKRGNII--------GSSLNVKIPNGCNDLQFLCKDFLQ------------- 108
SILK A +K + G+ +N P + + +F
Sbjct: 514 SILKNACQAKTPPPVQLIGPPKSGALVNNVSPGREDGHEQSVANFQNQNTSIWSNGVLPV 573
Query: 109 SPRKVRTPSLRDRRFKDRPSPLGPNGKNVNIGFE---------------------DSVRE 147
SPRK R+ +RDR+ KDRPSPLGPNGK ++ + D R
Sbjct: 574 SPRKSRS-GVRDRKLKDRPSPLGPNGKVDSVAHQSTATEDSGSKVDMENGILTPCDYQRP 632
Query: 148 IHEQQSNKEL-------------------DSAASRIPLCVEDGEEVDQDSEKVNIYMRSP 188
+ Q+ EL + + + VEDGEEV+Q + +N + RSP
Sbjct: 633 MQHLQAVDELPENGMGDVIQRPAEKPRMHGKGPTEVSI-VEDGEEVEQLNH-LN-FSRSP 689
Query: 189 IQPPLAIPTYNK---GTRTLLHNGLPSGTDTCQSIGELPDTPSLTKRLEQKLEMEGF-KI 244
+ PL IP G R L +C G L DT +L +R+EQ ++G +
Sbjct: 690 LIAPLGIPYCTASVGGARKALTVNSTGDFVSCCDSGRLSDTDTLRRRMEQIATVQGLGGV 749
Query: 245 SADAAALMNKALDTYLKRLIKPCLDLAASKAVNRS---------------NGPIQPGLNE 289
S + A ++N LD YLKRLI+ C+DL +++ N NG + P +
Sbjct: 750 STECANMLNNVLDVYLKRLIRSCVDLVGARSGNEPRKLPVSKQQIQGKVING-VWPNNHL 808
Query: 290 QIGS------------------VSVSDFRTATELNP 307
+ S VS+ DF+ A ELNP
Sbjct: 809 HVQSAGGMAEPEPEPEHRPPRTVSLHDFKVAMELNP 844