Miyakogusa Predicted Gene

Lj4g3v0731780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0731780.1 Non Chatacterized Hit- tr|C6T253|C6T253_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,40.79,0.00000000000006,seg,NULL; VQ,VQ,CUFF.47962.1
         (191 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g22760.1                                                       124   5e-29
Glyma17g17210.1                                                       117   9e-27
Glyma01g40320.1                                                       102   2e-22
Glyma11g04970.1                                                        81   7e-16

>Glyma05g22760.1 
          Length = 186

 Score =  124 bits (312), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/162 (50%), Positives = 96/162 (59%), Gaps = 24/162 (14%)

Query: 30  YPYQSH-SLLHSVRKTPAKSWKKKLPVAPMPPTPVKIYKVDPINFRELVQQLTCAPEFKP 88
           YP Q+H S L SVRKTPAK WKK  PVAPMPPTP+K+YKVD INFR++VQQLT APE   
Sbjct: 34  YPLQNHNSWLRSVRKTPAKPWKKA-PVAPMPPTPIKVYKVDAINFRDVVQQLTGAPE--- 89

Query: 89  SHQPHEQVLQSIENATTNSSFHVHSAPVQNTSIRDTAALTLPIPLPVCTNNWYQGLQSEA 148
            H+  +Q LQ I+ A   S+   +  P QN S  DT               WYQ      
Sbjct: 90  -HESQQQHLQ-IKIARAESADAPNVPPKQNQSGGDTCG------------KWYQEF---L 132

Query: 149 FDVNSQETVA--DRAVIPAWLEMLLFSPTSFSNGCFFPPLSP 188
             +NS ET    D A+ P +L M L SP S+SN CFFPPLSP
Sbjct: 133 LGMNSPETNTNNDGAMAPGFLGMNLLSPNSYSNFCFFPPLSP 174


>Glyma17g17210.1 
          Length = 190

 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 78/162 (48%), Positives = 90/162 (55%), Gaps = 21/162 (12%)

Query: 30  YPYQSHS--LLHSVRKTPAKSWKKKLPVAPMPPTPVKIYKVDPINFRELVQQLTCAPEFK 87
           YP Q+HS   L SVRKTPAK WKK   VAPMPPTPVK+YKVD INFRE+VQQLT AP+ K
Sbjct: 35  YPLQNHSSSWLRSVRKTPAKPWKKHH-VAPMPPTPVKVYKVDAINFREVVQQLTGAPKHK 93

Query: 88  PSHQPHEQVLQSIENATTNSSFHVHSAPVQNTSIRDTAALTLPIPLPVCTNNWYQGLQSE 147
           P     +Q+LQ       +S   +   P QN S  DT             N WYQ     
Sbjct: 94  P-----QQLLQINIARAESSDAPLDVPPKQNQSSGDTC------------NKWYQEFLLG 136

Query: 148 AFDVNSQETVADRAVIPAWLEMLLFSPTSFSNG-CFFPPLSP 188
                +     D A+ P +L M L SP S+SN  CFFPPLSP
Sbjct: 137 MNSPGTNNNNNDGAMTPGFLGMNLLSPNSYSNYFCFFPPLSP 178


>Glyma01g40320.1 
          Length = 154

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/126 (52%), Positives = 86/126 (68%), Gaps = 7/126 (5%)

Query: 28  NAYPY-QSHSLLHSVRKTPAKSWKKKLPVAPMPPTPVKIYKVDPINFRELVQQLTCAPEF 86
            +YP  +SHSLLH+VRKT  KSWKK  PVAP  PTP+++YKVD INFR+LVQQLT APEF
Sbjct: 6   GSYPASKSHSLLHTVRKTQVKSWKKA-PVAPPAPTPIRVYKVDAINFRDLVQQLTGAPEF 64

Query: 87  KPSHQPHEQVLQSIENATTNSSFHVHSAPVQNTSIRDTAALTLPIPLPVCTNNWYQGLQS 146
           KP  Q H Q+ QS+  A   ++  V++ P Q  S +D  A +  +P    + NW+QG QS
Sbjct: 65  KPD-QEHHQLFQSVAVAPIAATSLVNTPPKQMLSSKDNIAASSTMP----STNWHQGAQS 119

Query: 147 EAFDVN 152
           EA ++N
Sbjct: 120 EALELN 125


>Glyma11g04970.1 
          Length = 155

 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 80/152 (52%), Gaps = 26/152 (17%)

Query: 36  SLLHSVRKTPAKSWKKKLPVAPMPPTPVKIYKVDPINFRELVQQLTCAPEFKPSHQPHEQ 95
           SLLH+VRK  AK WKK     P P   +++YKVD INFR+LVQQLT APEFKP+ Q   Q
Sbjct: 17  SLLHTVRKVQAKPWKKAAVAPPAPTP-IRVYKVDAINFRDLVQQLTGAPEFKPADQEQHQ 75

Query: 96  VLQSIENATTNSSFHVHSAPVQNTSIRDTAALTLPIPLPVCTNNWYQGLQSEAFDVNSQE 155
           +  S+  A   ++F V +      S +D  A +  +       NWYQG +SE        
Sbjct: 76  LFPSV--APIAATF-VDTPQKPMLSSKDNIAASSTVS---SATNWYQGAKSEP------- 122

Query: 156 TVADRAVIPAWLEMLLFSPTSFSNGCFFPPLS 187
                      LEM L SP+S+ N  F PP+S
Sbjct: 123 -----------LEMNLSSPSSY-NWFFVPPIS 142