Miyakogusa Predicted Gene

Lj4g3v0720730.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0720730.2 tr|F0YQM0|F0YQM0_AURAN Selenoprotein (Fragment)
OS=Aureococcus anophagefferens GN=Hypo5 PE=4
SV=1,36.84,5e-19,AhpC-TSA_2,NULL,CUFF.47959.2
         (217 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g17050.1                                                       374   e-104
Glyma17g17040.1                                                       362   e-100
Glyma17g17050.3                                                       288   4e-78
Glyma17g17050.2                                                       234   6e-62
Glyma17g17050.4                                                       202   2e-52
Glyma19g36130.1                                                        92   5e-19
Glyma03g33400.1                                                        57   2e-08

>Glyma17g17050.1 
          Length = 251

 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/215 (81%), Positives = 189/215 (87%)

Query: 3   SKGSVFFTRKRTDASVVRASNSEYSPSITENLGDVSIFTAAGQPVMFKDLWDQNQGVAVV 62
           SKG     R    +  V  SNSEYS  I ENLGDV+IFTA G+PV F DLWDQ+QG+AVV
Sbjct: 37  SKGGSVTVRHSIVSPRVSVSNSEYSTQIAENLGDVTIFTATGEPVRFSDLWDQSQGIAVV 96

Query: 63  ALLRHFGCPCCWELASTLKESKARFDSAGVKLIAVGVGAPDKARMLAERLPFPMDCLYAD 122
           ALLRHFGCPCCWELAS LKESKARFDSAGVKLIAVG+G P+KARMLAERLPFP+DCLYAD
Sbjct: 97  ALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGIGTPNKARMLAERLPFPLDCLYAD 156

Query: 123 PDRKAYDTLDLYYGFGRTFFNPASSKVLSRFDALRKAVKNYTIEATPDDRSGVLQQGGMF 182
           PDRKAY  L+LYYGFGRTFFNP+S KV SRFDAL+KAVKNYTIEATPDDRSGVLQQGGMF
Sbjct: 157 PDRKAYHVLNLYYGFGRTFFNPSSIKVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMF 216

Query: 183 VFRGKELVYARKDEGTGDHAPLDDVFDVCCKVPVA 217
           VFRGK+L+YARKDEGTGDHAPLDDVFDVCCK PVA
Sbjct: 217 VFRGKQLLYARKDEGTGDHAPLDDVFDVCCKAPVA 251


>Glyma17g17040.1 
          Length = 251

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/217 (78%), Positives = 187/217 (86%)

Query: 1   MRSKGSVFFTRKRTDASVVRASNSEYSPSITENLGDVSIFTAAGQPVMFKDLWDQNQGVA 60
           + SKG     R    +  V  SNSEYSP I ENLGDV+IFTAAG+PV F DLWDQNQGVA
Sbjct: 35  IASKGVSVTLRNSITSPRVSVSNSEYSPQIAENLGDVTIFTAAGEPVRFSDLWDQNQGVA 94

Query: 61  VVALLRHFGCPCCWELASTLKESKARFDSAGVKLIAVGVGAPDKARMLAERLPFPMDCLY 120
           VVA+LRHFGC CCWE AS LKESKARFDSAG+KLIAVGVG P+KAR+LAERLPFPMDCLY
Sbjct: 95  VVAMLRHFGCICCWEFASALKESKARFDSAGIKLIAVGVGTPNKARILAERLPFPMDCLY 154

Query: 121 ADPDRKAYDTLDLYYGFGRTFFNPASSKVLSRFDALRKAVKNYTIEATPDDRSGVLQQGG 180
           ADPDRKAY+ L+LY+G GRTF NPAS+KV SR+DAL+KA KNYTI ATPDD SGVLQQGG
Sbjct: 155 ADPDRKAYNVLNLYFGLGRTFLNPASAKVFSRWDALQKAAKNYTIGATPDDISGVLQQGG 214

Query: 181 MFVFRGKELVYARKDEGTGDHAPLDDVFDVCCKVPVA 217
           MFVFRGK+L+YARKDEGTGDHAPLDDVFDVCCK PVA
Sbjct: 215 MFVFRGKQLLYARKDEGTGDHAPLDDVFDVCCKAPVA 251


>Glyma17g17050.3 
          Length = 224

 Score =  288 bits (736), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 136/172 (79%), Positives = 147/172 (85%)

Query: 3   SKGSVFFTRKRTDASVVRASNSEYSPSITENLGDVSIFTAAGQPVMFKDLWDQNQGVAVV 62
           SKG     R    +  V  SNSEYS  I ENLGDV+IFTA G+PV F DLWDQ+QG+AVV
Sbjct: 37  SKGGSVTVRHSIVSPRVSVSNSEYSTQIAENLGDVTIFTATGEPVRFSDLWDQSQGIAVV 96

Query: 63  ALLRHFGCPCCWELASTLKESKARFDSAGVKLIAVGVGAPDKARMLAERLPFPMDCLYAD 122
           ALLRHFGCPCCWELAS LKESKARFDSAGVKLIAVG+G P+KARMLAERLPFP+DCLYAD
Sbjct: 97  ALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGIGTPNKARMLAERLPFPLDCLYAD 156

Query: 123 PDRKAYDTLDLYYGFGRTFFNPASSKVLSRFDALRKAVKNYTIEATPDDRSG 174
           PDRKAY  L+LYYGFGRTFFNP+S KV SRFDAL+KAVKNYTIEATPDDRSG
Sbjct: 157 PDRKAYHVLNLYYGFGRTFFNPSSIKVFSRFDALQKAVKNYTIEATPDDRSG 208


>Glyma17g17050.2 
          Length = 197

 Score =  234 bits (596), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 124/215 (57%), Positives = 136/215 (63%), Gaps = 54/215 (25%)

Query: 3   SKGSVFFTRKRTDASVVRASNSEYSPSITENLGDVSIFTAAGQPVMFKDLWDQNQGVAVV 62
           SKG     R    +  V  SNSEYS  I ENLGDV+IFTA G+PV F DL          
Sbjct: 37  SKGGSVTVRHSIVSPRVSVSNSEYSTQIAENLGDVTIFTATGEPVRFSDL---------- 86

Query: 63  ALLRHFGCPCCWELASTLKESKARFDSAGVKLIAVGVGAPDKARMLAERLPFPMDCLYAD 122
                      W+ +                                 +LPFP+DCLYAD
Sbjct: 87  -----------WDQS---------------------------------QLPFPLDCLYAD 102

Query: 123 PDRKAYDTLDLYYGFGRTFFNPASSKVLSRFDALRKAVKNYTIEATPDDRSGVLQQGGMF 182
           PDRKAY  L+LYYGFGRTFFNP+S KV SRFDAL+KAVKNYTIEATPDDRSGVLQQGGMF
Sbjct: 103 PDRKAYHVLNLYYGFGRTFFNPSSIKVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMF 162

Query: 183 VFRGKELVYARKDEGTGDHAPLDDVFDVCCKVPVA 217
           VFRGK+L+YARKDEGTGDHAPLDDVFDVCCK PVA
Sbjct: 163 VFRGKQLLYARKDEGTGDHAPLDDVFDVCCKAPVA 197


>Glyma17g17050.4 
          Length = 189

 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 95/124 (76%), Positives = 103/124 (83%)

Query: 3   SKGSVFFTRKRTDASVVRASNSEYSPSITENLGDVSIFTAAGQPVMFKDLWDQNQGVAVV 62
           SKG     R    +  V  SNSEYS  I ENLGDV+IFTA G+PV F DLWDQ+QG+AVV
Sbjct: 37  SKGGSVTVRHSIVSPRVSVSNSEYSTQIAENLGDVTIFTATGEPVRFSDLWDQSQGIAVV 96

Query: 63  ALLRHFGCPCCWELASTLKESKARFDSAGVKLIAVGVGAPDKARMLAERLPFPMDCLYAD 122
           ALLRHFGCPCCWELAS LKESKARFDSAGVKLIAVG+G P+KARMLAERLPFP+DCLYAD
Sbjct: 97  ALLRHFGCPCCWELASALKESKARFDSAGVKLIAVGIGTPNKARMLAERLPFPLDCLYAD 156

Query: 123 PDRK 126
           PDRK
Sbjct: 157 PDRK 160


>Glyma19g36130.1 
          Length = 256

 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 8/204 (3%)

Query: 14  TDASVVRASNSEYSPSI----TENLGDVSIFTAAGQPVMFKDLWDQNQGVAVVALLRHFG 69
           T    V AS    SP +    T +L  V +F   G  +   DLW   +  AVVA  RHFG
Sbjct: 55  TTTPFVAASAGVESPVLGEDTTSSLDSVKVFDLNGNGIPISDLWKDRK--AVVAFARHFG 112

Query: 70  CPCCWELASTLKESKARFDSAGVKLIAVGVGAPDKARMLAERLPFPMDCLYADPDRKAYD 129
           C  C + A  L   K   D++GV L+ +G G+ D+A+  AE+  F  + +YADP   +Y+
Sbjct: 113 CVLCRKRADYLSSKKDIMDASGVALVLIGPGSIDQAKSFAEKSKFEGE-IYADPTHSSYE 171

Query: 130 TLDLYYGFGRTFFNPASSKVLSRFDALRKAVKNYTIEATPDDRSGVLQQGGMFVFRGK-E 188
            L+   G   TF   A  K++  +    +     + E     R G  Q G +    GK  
Sbjct: 172 ALNFVSGVLTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNN 231

Query: 189 LVYARKDEGTGDHAPLDDVFDVCC 212
           + Y  +D+  GD   ++D+   CC
Sbjct: 232 ISYLHRDKEAGDDPEIEDILKACC 255


>Glyma03g33400.1 
          Length = 158

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 5/127 (3%)

Query: 87  FDSAGVKLIAVGVGAPDKARMLAERLPFPMDCLYADPDRKAYDTLDLYYGFGRTFFNPAS 146
            D++GV L+ +G G+ D+A+  +E+  F  + +YADP   +Y+ L+   G   TF   A 
Sbjct: 35  MDASGVALVLIGPGSIDQAKSFSEKSKFEGE-IYADPTHLSYEALNFVSGVLTTFTPNAG 93

Query: 147 SKVLSRFDALRKAVKNYTIEATPDDRS-GVLQQGGMFVFRGKELVYARKDEGTGDHAPLD 205
            K++  +  L    +++ +    D  S G  +QGG  V  G   +    D+  GD   ++
Sbjct: 94  LKIIQLY--LEGYRQHWKLSFEKDTVSRGGWKQGGTIV-AGPAAISQLVDKEAGDDPEIE 150

Query: 206 DVFDVCC 212
           D+F  CC
Sbjct: 151 DIFKACC 157