Miyakogusa Predicted Gene

Lj4g3v0684200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0684200.1 CUFF.47914.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g04230.1                                                       120   3e-28

>Glyma20g04230.1 
          Length = 183

 Score =  120 bits (302), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 38  CGFCLFMKGGGCKDSFIDWENCVQEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPILR 97
           CGFCLFMKGGGC+D FI WENCVQEAE NNEDL+EKCAQVTA LK+CMDAH+DYYEPILR
Sbjct: 60  CGFCLFMKGGGCRDEFIGWENCVQEAENNNEDLLEKCAQVTAALKRCMDAHSDYYEPILR 119