Miyakogusa Predicted Gene
- Lj4g3v0669460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0669460.1 Non Chatacterized Hit- tr|C5XHY5|C5XHY5_SORBI
Putative uncharacterized protein Sb03g011625
(Fragment,31.87,4e-19,SWIM,Zinc finger, SWIM-type; ZF_SWIM,Zinc
finger, SWIM-type; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NA,CUFF.47861.1
(221 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g16800.1 115 4e-26
Glyma16g23790.1 114 5e-26
Glyma11g19580.1 77 2e-14
Glyma20g22440.2 74 9e-14
Glyma01g33280.1 64 1e-10
Glyma03g40850.1 64 2e-10
Glyma18g38410.1 62 3e-10
Glyma14g37470.1 62 5e-10
Glyma20g21590.1 61 1e-09
Glyma12g28950.1 60 1e-09
Glyma04g32310.1 59 3e-09
Glyma13g10400.1 58 7e-09
Glyma06g47100.1 55 7e-08
Glyma03g38920.1 50 1e-06
>Glyma09g16800.1
Length = 936
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 13/214 (6%)
Query: 6 HIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIAIP 65
H FCV HL+ NF K++ ++ ++ AK+T + M LK +N A+ +L P
Sbjct: 571 HRFCVLHLWKNFTKQWKSKE-LKGIVWQCAKSTTVAEFEGHMAHLKTINCQAWEYLNKWP 629
Query: 66 KKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTMFEWIKTYLMTRFAVLNEKM 125
K+ W K + P+ D I NN E FNS IL R K I+TM E I++Y+M A K+
Sbjct: 630 KQAWTKAHFSTTPKVDNICNNTCEVFNSRILQYRCKAIITMLEEIRSYIMRTMAARKVKL 689
Query: 126 IKWKGDVCPKPRIRMDREIKAAGDWISRWTGQGMFEVQHMEGGDGFVVDLNRNKCTCNLW 185
G +CP R+++E A W W G M G + V + NK NL
Sbjct: 690 SGKPGPLCPVQYKRLEKEFHFANQWTPIWCGDNM--------GLRYEVHMWGNKVEVNLG 741
Query: 186 ELVEIPCRHALAGVHYRGNDPEDYVHQCYKRDAY 219
+PCRHA+A + ++G PED H+ +AY
Sbjct: 742 ----MPCRHAIATITHKGGKPEDMCHEWLSIEAY 771
>Glyma16g23790.1
Length = 2120
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 108/217 (49%), Gaps = 19/217 (8%)
Query: 6 HIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIAIP 65
H FCV HL+ NF K++ ++ ++ AK+T + M LK +N A+ +L P
Sbjct: 1767 HRFCVLHLWKNFTKQWKSKE-LKGIVWQCAKSTTVAEFEGHMAHLKTINCQAWEYLNKWP 1825
Query: 66 KKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTMFEWIKTYLMTRFAVLNEKM 125
K+ W K + P+ D I NN E FNS IL R KPI+TM E I++Y+M A K+
Sbjct: 1826 KQAWTKAHFSTIPKVDNICNNTCEVFNSRILQYRCKPIITMLEEIRSYIMRTMAARKVKL 1885
Query: 126 IKWKGDVCPKPRIRMDREIKAAGDWISRWTGQGM---FEVQHMEGGDGFVVDLNRNKCTC 182
G +C R+++E A W W G M +EV HM G NK
Sbjct: 1886 SGKPGPLCLVQYKRLEKEFHFANQWTPIWCGDNMGLRYEV-HMWG----------NKVEV 1934
Query: 183 NLWELVEIPCRHALAGVHYRGNDPEDYVHQCYKRDAY 219
NL +PCRHA+A + ++G PED H+ +AY
Sbjct: 1935 NLG----MPCRHAIATITHKGGKPEDMCHEWLSIEAY 1967
>Glyma11g19580.1
Length = 583
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 16/89 (17%)
Query: 5 EHIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLI-A 63
E+ FC+RHLY NFK F GG ++RDLMMGAAKATY + A++W++
Sbjct: 297 ENRFCLRHLYQNFKNFFGGGTLLRDLMMGAAKATYVQ---------------AHDWVMTT 341
Query: 64 IPKKMWCKHAMNFYPRCDVIINNLSESFN 92
+ K WCKHA + YP+ V N + E+ N
Sbjct: 342 VDKNAWCKHAFSRYPKLSVAENAVPEAGN 370
>Glyma20g22440.2
Length = 544
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 16/225 (7%)
Query: 6 HIFCVRHL----YANFKKKFSGGAV---IRDLMMGAAKATYERAWVAKMDQLKALNEPAY 58
H +C+R+L + + K +FS + I DL AA AT + M+ +K ++E AY
Sbjct: 255 HAYCLRYLTEQLFRDLKGQFSHEVMRLMIEDLY-AAAYATKPEGFQNSMESIKKISEEAY 313
Query: 59 NWLIAIPKKMWCKHAMNFY--PRCDVIINNLSESFNSTILVARDKPILTMFEWIKTYLMT 116
NW+I + W A +F+ R + + +N E F + A + PI M + I+ +M
Sbjct: 314 NWIIQSEPQNW---ANSFFLGTRYNHMTSNFGELFYNWAADADELPITQMVDVIRGKIME 370
Query: 117 RFAVLNEKMIKWKGDVCPKPRIRMDREIKAAGDWISRWTGQGMFEVQHMEGGDGFVVDLN 176
+W+ + P ++ +E + + + +EV G VVD++
Sbjct: 371 LIISRKAVSDQWETRLSPTMEEKLKKESQKSNSLSVLQSTCSTYEVC---GDTTEVVDID 427
Query: 177 RNKCTCNLWELVEIPCRHALAGVHYRGNDPEDYVHQCYKRDAYKL 221
R +C+C W+L +PC HA+A + DY + ++Y+L
Sbjct: 428 RWECSCKAWQLTGVPCCHAIAVISGIDQSFYDYCSRYCTAESYRL 472
>Glyma01g33280.1
Length = 835
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 16/227 (7%)
Query: 4 GEHIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIA 63
G H++CVRH+ +NF +KF+ A ++++ A + + +++ + L+ W+
Sbjct: 525 GYHVYCVRHIASNFNRKFNN-AKQKEMLKKLAYTPCKHIFDQNLEKFRELSPAIATWIDR 583
Query: 64 IPKKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTM----FEWIKTYLMTRFA 119
I K+ W R D + NLSE N + R+ PI + + + Y R
Sbjct: 584 ISKEKWTMAYDREGRRYDHMTTNLSECINKVLKDCRNIPITALVKSTYSRCRKYFFERGR 643
Query: 120 VLNEKMIKWKGDV-CPK--PRIRMDRE------IKAAGDWISRWTGQGMFEVQHMEGGDG 170
++ + G V C K +R ++E I+ +R+ + F GG
Sbjct: 644 QAQRQLNE--GQVYCSKLVKELRKNQEQACSHIIRVHDIHSTRFEVEETFNPITQRGGQK 701
Query: 171 FVVDLNRNKCTCNLWELVEIPCRHALAGVHYRGNDPEDYVHQCYKRD 217
+ V+LN + C C + + PC H +A Y + Y+ Y +
Sbjct: 702 WAVNLNGHYCQCGRYSALHYPCSHIIAACGYVSLNYYQYIDVVYTNE 748
>Glyma03g40850.1
Length = 455
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 47/218 (21%)
Query: 6 HIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIAIP 65
H FC+RHL +F+K+F+ ++ +L+ AA+ + +K+ +++ +++ A W+ +P
Sbjct: 256 HGFCMRHLIDSFRKEFNNTMLV-NLLWNAAQVLTILEFESKVLEIEEISQDAAYWIRRVP 314
Query: 66 KKMWCK---HAMNFYPRCDVIINNLSESFNSTILVARDKPILTMFEWIKTYLMTRFAVLN 122
+W +F+ + N+ ES N+ IL A PI+ M E I+ LM F
Sbjct: 315 PHLWATAYFEGQSFFH----LTANIVESLNTWILDASGLPIIQMMECIRRQLMIWFNERR 370
Query: 123 EKMIKWKGDVCPKPRIRMDREIKAAGDWISRWTGQGMFEVQHMEGGDGFVVDLNRNKCTC 182
E ++W + R R C C
Sbjct: 371 ETSMQWPSILHGHTRTRC---------------------------------------CQC 391
Query: 183 NLWELVEIPCRHALAGVHYRGNDPEDYVHQCYKRDAYK 220
W+L +PC HA+A + + + C+ Y+
Sbjct: 392 RGWQLYGLPCAHAVAALLSIRQNVHRFTESCFTVATYR 429
>Glyma18g38410.1
Length = 532
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 7 IFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIAIPK 66
++C+R + +NF K+F + + ++ + R + AK+ ++A A +WL IPK
Sbjct: 246 VYCIRQIASNFNKQFKTVDLKKQVINIGYEMRKPR-FEAKLLAMRAEFPQAADWLDQIPK 304
Query: 67 KMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTM----FEWIKTYLMTR-FAVL 121
W + A N + + NL+E NS + AR PI + F I +T+ ++
Sbjct: 305 SKWTQ-AYNEGKQYGHMTTNLAECMNSVLKGARALPITVLVNETFNKINDSFLTKGIKIM 363
Query: 122 NEKMIKWKGDVCPKPRIRMDREIKAAGDWISRWTGQ--GMFEVQHMEGGD------GFVV 173
N MIK + + M + A R + G FE+Q + V
Sbjct: 364 N--MIKAEHRYSEDIYVMMQKNQHIATSHYVRMYVRKIGEFEIQEIANTQLGRRAMACTV 421
Query: 174 DLNRNKCTCNLWELVEIPCRHALAGVHYRGNDPEDYVHQCYK 215
LN C C ++ + +PC HA+A + + +D+V YK
Sbjct: 422 KLNEWSCDCGQFQALRLPCSHAIAACAFCNLNSDDFVDPVYK 463
>Glyma14g37470.1
Length = 717
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 16/227 (7%)
Query: 4 GEHIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIA 63
G H++CVRH+ +NF +KF+ A +++ A + + +++ + L+ W+
Sbjct: 407 GYHVYCVRHIASNFNRKFNN-AKQKEMFKKLAYTPCKHVFDQNLEKFRQLSPAIARWIDR 465
Query: 64 IPKKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTMFEWIKTYLMTRFAVLN- 122
I K+ W R + NLSE N + R PI + + TY R ++
Sbjct: 466 ISKEKWSMAYDTSGRRYGHMTTNLSECVNKVLKDCRSIPITALVK--STYSRCRKYFIDP 523
Query: 123 ----EKMIKWKGDVCPKPRIRMDREIKAAGDWI--------SRWTGQGMFEVQHMEGGDG 170
++ ++ C K + + + A I +R+ + F GG
Sbjct: 524 GRQAQRQLREGQVYCSKLVTELRKNQEQACSHIVRVYDIHSTRFEVEETFNPITQRGGQK 583
Query: 171 FVVDLNRNKCTCNLWELVEIPCRHALAGVHYRGNDPEDYVHQCYKRD 217
+ V+LN + C C + + PC H +A Y + Y+ Y +
Sbjct: 584 WAVNLNGHYCQCGRYSALHYPCSHIIAACGYVSMNYYQYIDVVYTNE 630
>Glyma20g21590.1
Length = 706
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 96/227 (42%), Gaps = 16/227 (7%)
Query: 4 GEHIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIA 63
G H++CVRH+ +NF +KF+ A ++++ A + + +++ + L+ W+
Sbjct: 396 GYHVYCVRHIASNFNRKFNN-AKQKEMLKKLAYTPCKHIFDQNLEKFRELSPAIATWIDR 454
Query: 64 IPKKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTM----FEWIKTYLMTRFA 119
I K+ W R + NLSE N + R+ PI + + + Y + R
Sbjct: 455 ISKEKWTMAYDREGRRYGHMTTNLSECINKVLKDCRNIPITALVKSTYSRCRKYFVERGR 514
Query: 120 VLNEKMIKWKGDV-CPK--PRIRMDRE------IKAAGDWISRWTGQGMFEVQHMEGGDG 170
++ + G V C K +R ++E ++ +R+ + F GG
Sbjct: 515 QAQRQLNE--GQVYCSKLVKELRKNQEQACSHIVRVYDIHSTRFEVEETFNPITQRGGQK 572
Query: 171 FVVDLNRNKCTCNLWELVEIPCRHALAGVHYRGNDPEDYVHQCYKRD 217
+ V+LN + C C + + PC H +A Y + Y+ Y +
Sbjct: 573 WAVNLNGHYCQCGRYSALHYPCSHIIAACGYVSLNYYQYIDVVYTNE 619
>Glyma12g28950.1
Length = 629
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 2 MLG--EHIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMD 48
+LG EH C RH+Y NFK KF GG ++R+LMM AAKA++E AW KM+
Sbjct: 257 LLGDVEHGVCERHIYNNFKNKFVGGTLLRNLMMRAAKASFEEAWDEKMN 305
>Glyma04g32310.1
Length = 618
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 90/225 (40%), Gaps = 12/225 (5%)
Query: 4 GEHIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIA 63
G H++CVRH+ +NF +KF+ A +++ A + + +++ + L+ W+
Sbjct: 308 GYHVYCVRHIASNFNRKFNN-AKQKEMFKKLAYTPCKHVFDQNLEKFRQLSPVIARWIDR 366
Query: 64 IPKKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTMFEWIKTYLMTRFAVLNE 123
I K+ W R + NLSE N + PI+ + + + F
Sbjct: 367 ISKEKWSMAYDTSGRRYGHMTTNLSECVNKVLKDCCSIPIIALVKSTYSRCRKYFVDCGR 426
Query: 124 KMIKW--KGDV-CPKPRIRMDREIKAAGDWI--------SRWTGQGMFEVQHMEGGDGFV 172
+ + KG V C K + + + A I +R+ + F GG +
Sbjct: 427 QAQRQLRKGQVYCSKLVTELRKNQEQACSHIVRVYDIHSTRFEVEETFNPITQRGGQKWA 486
Query: 173 VDLNRNKCTCNLWELVEIPCRHALAGVHYRGNDPEDYVHQCYKRD 217
V+LN + C C + + PC H +A Y + Y+ Y +
Sbjct: 487 VNLNGHYCQCGRYSALHYPCSHIIAACGYVSMNYYQYIDVVYTNE 531
>Glyma13g10400.1
Length = 2049
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 49 QLKALNEPAYNWLIAIPKKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTMFE 108
LK +N A+ +L PK+ W K + P+ D I NN + IL R KPI+TM E
Sbjct: 1753 HLKTINCQAWEYLNKWPKQAWTKAHFSTIPKVDNICNN------TRILQYRCKPIITMLE 1806
Query: 109 WIKTYLMTRFAVLNEKMIKWKGDVCPKPRIRMDREIKAAGDWISRW 154
I +Y+M A K+ G +CP R+++E A W W
Sbjct: 1807 EIISYIMRTMAACKVKLSGKFGPLCPVQYKRLEKEFHFANQWTPIW 1852
>Glyma06g47100.1
Length = 767
Score = 54.7 bits (130), Expect = 7e-08, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 87/226 (38%), Gaps = 23/226 (10%)
Query: 6 HIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIAIP 65
H FC+RH+ NF + S ++ +M A A E+ + ++A A WL +P
Sbjct: 478 HFFCLRHIAQNFLRGNSNCKHLKKPLMLAGYAYTEKMHWRHLGDIRANKSSAAEWLDQLP 537
Query: 66 KKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTMFEWIKTYLMTRFAVLN--- 122
K+ W + + R + NLSES NS R P+ ++ E +TY T N
Sbjct: 538 KQKWIQ-CFDEGKRWGHMTTNLSESVNSMFKNTRHLPVSSLVE--ETYFKTAQLFANRGR 594
Query: 123 --EKMIKWKG-------DVCPKPRIRMDREIKAAGD-----WISRWTGQGMFEVQHMEGG 168
+ MI D + + I D +I T Q + E G
Sbjct: 595 QTQAMINSGSQYSEVVFDAINSGQQESNTHIVNEFDRHNHTFIITET-QSLLETPRPPG- 652
Query: 169 DGFVVDLNRNKCTCNLWELVEIPCRHALAGVHYRGNDPEDYVHQCY 214
F V L KC C ++ +PC H +A DP YV +
Sbjct: 653 -RFRVMLQSQKCDCGEFQAKHLPCSHVMAACKSVNVDPMTYVSMIF 697
>Glyma03g38920.1
Length = 864
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 6 HIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIAIP 65
H FC+RH+ NF + S ++ +M A A E+ + ++A A WL +P
Sbjct: 604 HFFCLRHIAQNFLRGNSNCKHLKKPLMLAGYAYTEKMHWRHLGNIRANKPSAAEWLDQLP 663
Query: 66 KKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTMFEWIKTYLMT 116
K+ W + + R + NLSES NS R P+ ++ E +TY T
Sbjct: 664 KQKWVQ-CFDEGKRWGHMTTNLSESVNSMFKNTRHLPVSSLVE--ETYFKT 711