Miyakogusa Predicted Gene

Lj4g3v0655900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0655900.1 Non Chatacterized Hit- tr|I0YVT9|I0YVT9_9CHLO
Uncharacterized protein (Fragment) OS=Coccomyxa subell,46,1e-17,no
description,Cytochrome c domain; Cytochrome c,Cytochrome c domain;
CYTC,Cytochrome c domain; seg,,CUFF.47821.1
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g34740.1                                                       243   5e-65
Glyma20g02550.1                                                       167   7e-42
Glyma20g02550.2                                                        98   6e-21

>Glyma07g34740.1 
          Length = 172

 Score =  243 bits (621), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 121/175 (69%), Positives = 138/175 (78%), Gaps = 3/175 (1%)

Query: 1   MKLAGMISCSTYYNRLLSVKDSVKREEENPIPRRKAKELKFSLKXXXXXXXXXXXXXXXI 60
           MKLA +IS  T Y  LLS+KD+V REE+  IP RK  E+KF  K               I
Sbjct: 1   MKLASLISGFTDYTHLLSIKDNVMREEKT-IPTRK-NEVKF-FKSLAPPLVAAFLVLSPI 57

Query: 61  SGTPVSSGQTIDIQRGATLFRKACIGCHDAGGNIIQPGSTLYTKDLQRNGVDTEEAIYRI 120
             TPVSS QT+DIQRG TLFR+ACIGCHDAGGNIIQPG+TL+ KDLQRNGVDTEEAIY +
Sbjct: 58  CSTPVSSAQTVDIQRGTTLFRQACIGCHDAGGNIIQPGATLFAKDLQRNGVDTEEAIYGV 117

Query: 121 SYYGKERMPGFGKECMPRGQCTFGARLEDEDIKLLAEFVKLQANKGWPSIELQEK 175
           +YYGK RMPGFGKECMPRGQCTFGARLEDEDI++LAEFVKLQA++GWPSIE +E+
Sbjct: 118 TYYGKGRMPGFGKECMPRGQCTFGARLEDEDIQILAEFVKLQADQGWPSIETKEE 172


>Glyma20g02550.1 
          Length = 140

 Score =  167 bits (422), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/175 (53%), Positives = 106/175 (60%), Gaps = 35/175 (20%)

Query: 1   MKLAGMISCSTYYNRLLSVKDSVKREEENPIPRRKAKELKFSLKXXXXXXXXXXXXXXXI 60
           MK+A +IS    Y  LLS+K+ V REE+ PIP  +  E+KF LK               I
Sbjct: 1   MKIASLISGCNDYTHLLSIKEHVMREEK-PIPTTRKSEVKF-LKSLTRLVAAFLVLSP-I 57

Query: 61  SGTPVSSGQTIDIQRGATLFRKACIGCHDAGGNIIQPGSTLYTKDLQRNGVDTEEAIYRI 120
              PVSS QT+DIQRG TLFR+ACIGCHDAGGNIIQ                        
Sbjct: 58  CSIPVSSAQTVDIQRGTTLFRQACIGCHDAGGNIIQ------------------------ 93

Query: 121 SYYGKERMPGFGKECMPRGQCTFGARLEDEDIKLLAEFVKLQANKGWPSIELQEK 175
                   PGFGKECMPRGQCTFGARLEDEDIK LAEFVKLQA++GWPSIE +E+
Sbjct: 94  --------PGFGKECMPRGQCTFGARLEDEDIKTLAEFVKLQADQGWPSIETKEE 140


>Glyma20g02550.2 
          Length = 95

 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 62/97 (63%), Gaps = 3/97 (3%)

Query: 1  MKLAGMISCSTYYNRLLSVKDSVKREEENPIPRRKAKELKFSLKXXXXXXXXXXXXXXXI 60
          MK+A +IS    Y  LLS+K+ V REE+ PIP  +  E+KF LK               I
Sbjct: 1  MKIASLISGCNDYTHLLSIKEHVMREEK-PIPTTRKSEVKF-LKSLTRLVAAFLVLSP-I 57

Query: 61 SGTPVSSGQTIDIQRGATLFRKACIGCHDAGGNIIQP 97
             PVSS QT+DIQRG TLFR+ACIGCHDAGGNIIQP
Sbjct: 58 CSIPVSSAQTVDIQRGTTLFRQACIGCHDAGGNIIQP 94