Miyakogusa Predicted Gene

Lj4g3v0643850.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0643850.1 Non Chatacterized Hit- tr|I1ND97|I1ND97_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22781
PE,84.47,0,seg,NULL; Tim17,Mitochondrial inner membrane translocase
subunit Tim17/Tim22/Tim23/peroxisomal prote,CUFF.47759.1
         (217 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g02120.1                                                       288   4e-78
Glyma01g01110.1                                                       280   1e-75
Glyma16g08520.2                                                       279   2e-75
Glyma16g08520.1                                                       279   2e-75

>Glyma20g02120.1 
          Length = 213

 Score =  288 bits (736), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 154/219 (70%), Positives = 161/219 (73%), Gaps = 8/219 (3%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGLYN+P+G R++ ASQAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNAPRGARVVAASQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGL A+ R+AAFGG
Sbjct: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLPAAARSAAFGG 120

Query: 121 VLLALIEGAGIMLNKFLSAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSWFG 180
           VLLALIEGAGIMLNKFLSAQQ                                 Q+SW  
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQ-----PMPMIVDEPLPPNGLPGQPVASAPDAASQSSWL- 174

Query: 181 GGWF--GKKDEVAAGGDGGSETKVLESFDAPPVPNFEYK 217
           GGWF  GKKDE AA   GGSETKVLESFDAPPVPNFEYK
Sbjct: 175 GGWFGDGKKDEAAAEATGGSETKVLESFDAPPVPNFEYK 213


>Glyma01g01110.1 
          Length = 200

 Score =  280 bits (715), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 149/219 (68%), Positives = 156/219 (71%), Gaps = 21/219 (9%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGLYNSPKGDR +GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           RVGGSFAVWGGLFS+FDCTMVY RQKEDPWNSI AGAATGGFLSMRQGL AS R+AAFGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIVAGAATGGFLSMRQGLGASARSAAFGG 120

Query: 121 VLLALIEGAGIMLNKFLSAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSWFG 180
           VLLALIEGAGIMLNKFLSAQQ                                 + SW  
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQ------------------PMPMIMDELPPQSSTEQSWL- 161

Query: 181 GGWF--GKKDEVAAGGDGGSETKVLESFDAPPVPNFEYK 217
           GGWF  G K+E A     GSETK+LESFDAPPVPNFEYK
Sbjct: 162 GGWFGGGNKEETATTAGSGSETKILESFDAPPVPNFEYK 200


>Glyma16g08520.2 
          Length = 200

 Score =  279 bits (713), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 147/217 (67%), Positives = 154/217 (70%), Gaps = 17/217 (7%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGLYNSPKGDR +GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           RVGGSFAVWGGLFS+FDCTMVY RQKEDPWNSI AGAATGGFLSMRQGL AS R+AAFGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIVAGAATGGFLSMRQGLGASARSAAFGG 120

Query: 121 VLLALIEGAGIMLNKFLSAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSWFG 180
           VLLALIEGAGIMLNKFLSAQQ                                 +  W  
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQ----------------PMPMIMDEPQPQPPQSSEQPWL- 163

Query: 181 GGWFGKKDEVAAGGDGGSETKVLESFDAPPVPNFEYK 217
           GGWFG  +     G GGSETK+LESFDAPPVPNFEYK
Sbjct: 164 GGWFGGGNREETAGSGGSETKILESFDAPPVPNFEYK 200


>Glyma16g08520.1 
          Length = 200

 Score =  279 bits (713), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 147/217 (67%), Positives = 154/217 (70%), Gaps = 17/217 (7%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGLYNSPKGDR +GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           RVGGSFAVWGGLFS+FDCTMVY RQKEDPWNSI AGAATGGFLSMRQGL AS R+AAFGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIVAGAATGGFLSMRQGLGASARSAAFGG 120

Query: 121 VLLALIEGAGIMLNKFLSAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSWFG 180
           VLLALIEGAGIMLNKFLSAQQ                                 +  W  
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQ----------------PMPMIMDEPQPQPPQSSEQPWL- 163

Query: 181 GGWFGKKDEVAAGGDGGSETKVLESFDAPPVPNFEYK 217
           GGWFG  +     G GGSETK+LESFDAPPVPNFEYK
Sbjct: 164 GGWFGGGNREETAGSGGSETKILESFDAPPVPNFEYK 200