Miyakogusa Predicted Gene

Lj4g3v0631000.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0631000.1 Non Chatacterized Hit- tr|B9SJ55|B9SJ55_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,45.05,0.00000000000002,Linker_histone,Histone H1/H5; "Winged helix"
DNA-binding domain,NULL; no description,Winged helix-tu,CUFF.47727.1
         (357 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g23750.1                                                        53   4e-07

>Glyma17g23750.1 
          Length = 99

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 4/52 (7%)

Query: 1  MIRRAITDLNERDGSTEEAISEFVRKKY----EDLPWAHARLLGNHLRKLCE 48
          MI  AI  LNE  GST+EAISEF++++Y    +DLP AH R+L   L +LC+
Sbjct: 48 MIESAIMGLNEETGSTKEAISEFIKREYNNNSDDLPLAHERILALQLERLCQ 99