Miyakogusa Predicted Gene
- Lj4g3v0630990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0630990.1 Non Chatacterized Hit- tr|B9SJ55|B9SJ55_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,34.51,0.000000000000002,Domain in histone families,Histone H1/H5;
Linker_histone,Histone H1/H5; "Winged helix" DNA-binding
d,CUFF.47726.1
(433 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g23750.1 82 1e-15
Glyma05g33890.1 61 3e-09
Glyma05g33890.2 61 3e-09
Glyma08g05710.1 57 3e-08
Glyma10g30560.1 56 7e-08
Glyma09g30800.1 56 9e-08
Glyma19g27610.1 55 1e-07
Glyma11g33690.1 55 2e-07
Glyma20g36880.1 53 6e-07
Glyma14g39590.1 52 2e-06
Glyma14g39600.2 51 2e-06
Glyma14g39600.1 51 3e-06
>Glyma17g23750.1
Length = 99
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 7/97 (7%)
Query: 32 DSMLSRLTQTDPPVSPSLINSADVGRQIQEVVSSFHTPAHPPYALMIRRAITDLNERDGS 91
DS+ S+L S S ++S+ + R+++E+ +F TP HPPYA MI AI LNE GS
Sbjct: 6 DSIFSQLNHHP---SLSTVDSSVIERRLRELFPAFRTPTHPPYAWMIESAIMGLNEETGS 62
Query: 92 TEEAISEFVRKKY----EDLPWAHARLLGNHLRKLCE 124
T+EAISEF++++Y +DLP AH R+L L +LC+
Sbjct: 63 TKEAISEFIKREYNNNSDDLPLAHERILALQLERLCQ 99
>Glyma05g33890.1
Length = 383
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 65 SFHTPAHPPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKL 122
SF +P HPPY MI AI L ERDGS++ AI +++ + Y+DLP H LL +HL +L
Sbjct: 4 SF-SPKHPPYDEMIYTAIGALKERDGSSKRAIGKYIEQVYKDLPPTHPALLTHHLNRL 60
>Glyma05g33890.2
Length = 300
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 65 SFHTPAHPPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKL 122
SF +P HPPY MI AI L ERDGS++ AI +++ + Y+DLP H LL +HL +L
Sbjct: 4 SF-SPKHPPYDEMIYTAIGALKERDGSSKRAIGKYIEQVYKDLPPTHPALLTHHLNRL 60
>Glyma08g05710.1
Length = 413
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 71 HPPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKL 122
HPPY MI AI L E+DGS++ AI +++ + Y+DLP H+ LL +HL +L
Sbjct: 34 HPPYDEMIYTAIGALKEKDGSSKRAIGKYMEQVYKDLPPTHSALLTHHLNRL 85
>Glyma10g30560.1
Length = 190
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 38/52 (73%)
Query: 70 AHPPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRK 121
+HPP+A+MI AI L ER GS++ AI++++ K+++LP + +L+ HL+K
Sbjct: 20 SHPPFAVMIAEAIASLKERTGSSQYAITKYIEGKHKELPATYKKLVLVHLKK 71
>Glyma09g30800.1
Length = 469
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 71 HPPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKL 122
HPPYA MI AI L E+DGS++ AI++++ + Y LP H+ LL HL L
Sbjct: 38 HPPYAEMIYTAIEALKEKDGSSKRAIAKYIEQVYTQLPPNHSDLLTQHLNHL 89
>Glyma19g27610.1
Length = 226
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 71 HPPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKL 122
HPPYA MI AI L E+DGS++ AI++++ + Y LP H+ LL HL L
Sbjct: 31 HPPYAEMIYTAIEALKEKDGSSKRAIAKYIEQVYTQLPPNHSNLLTQHLTHL 82
>Glyma11g33690.1
Length = 184
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 69 PAHPPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCE 124
P+ PPY MIR AI LNE +GS + +IS+++ Y LP AH LL HL K+ E
Sbjct: 11 PSLPPYPEMIREAIEALNEENGSNKSSISKYIESTYGGLPQAHKVLLNVHLAKMRE 66
>Glyma20g36880.1
Length = 190
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 70 AHPPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRK 121
+HP +A+MI AI L ER GS++ AI++F+ K+++LP + +L+ HL+K
Sbjct: 20 SHPTFAVMIAEAIASLKERTGSSQYAITKFIEGKHKELPPTYKKLVLVHLKK 71
>Glyma14g39590.1
Length = 176
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 72 PPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCEVREIA 129
PPY MI +A+ LNE DGS++ AIS+++ Y +LP +LG+HL K+ E E+A
Sbjct: 13 PPYPEMIVKALEALNEADGSSKSAISKYIETTYGELP--DETVLGSHLNKMKESGELA 68
>Glyma14g39600.2
Length = 152
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 72 PPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCEVREIA 129
PPY MI +A+ LNE DGS + AIS+++ Y +LP +LG+HL K+ E E+A
Sbjct: 13 PPYPEMIVKALEALNEADGSNKSAISKYIETTYGELP--DETVLGSHLNKMKESGELA 68
>Glyma14g39600.1
Length = 176
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 72 PPYALMIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCEVREIA 129
PPY MI +A+ LNE DGS + AIS+++ Y +LP +LG+HL K+ E E+A
Sbjct: 13 PPYPEMIVKALEALNEADGSNKSAISKYIETTYGELP--DETVLGSHLNKMKESGELA 68