Miyakogusa Predicted Gene

Lj4g3v0619970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0619970.1 Non Chatacterized Hit- tr|Q9SZQ1|Q9SZQ1_ARATH
Putative uncharacterized protein AT4g29780
OS=Arabidop,25.68,2e-18,seg,NULL; DDE_4,NULL;
UNCHARACTERIZED,Harbinger transposase-derived nuclease,CUFF.47644.1
         (414 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23150.2                                                       102   1e-21

>Glyma20g23150.2 
          Length = 402

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 152/342 (44%), Gaps = 34/342 (9%)

Query: 86  FRASFLMTSSTFEWLSGLLEPLLDCRDPADLLPLN---LSSGVRLGIGLFRLATGSDYAD 142
           F + F ++  TF ++  L+E  +  R  ++ + LN   LS   ++ + L RL++G   + 
Sbjct: 66  FESVFKISRKTFNYICSLVEEDMLAR-ASNFVDLNGNRLSLNDQVAVALRRLSSGESLST 124

Query: 143 ISDRFGVSVPVARFCVKQLCRVLCTNFRFWISFPGPN-DLPSVSHGFESLSGLPNCCGVV 201
           I + F ++         +    +       +S+     ++  +   FE++ GL NCCG V
Sbjct: 125 IGESFRMNQSTVSQVTWKFVETMEERGLHHLSWASTEMEMEEIKSKFENIRGLSNCCGAV 184

Query: 202 FCSRFDVS-PSAATKNA------QNHRVAAQIVVDSTCKILSIAAGFLGEKSDSQILKAS 254
             +   ++ PS    N+      +N  +  Q +VD   +   I  G+ G  SD Q+L++S
Sbjct: 185 DSTHIMMTLPSVDALNSVWLDREKNCSMVLQAIVDPDLRFRDIVTGWPGSMSDEQVLRSS 244

Query: 255 TLCEDIEDGTLLNAPST---DNAGVNQYLVGDSGYPLLPWLMVPFAEAAPGSVEGNFNEV 311
           +  +  E+G  LN       D     +Y++GD+G+PL  WL+ P+      +V+  FN+ 
Sbjct: 245 SFFKLAEEGKRLNGGKKTLPDGTLFREYIIGDTGFPLFSWLLTPYEGKGFSNVQVEFNKR 304

Query: 312 HGLMRLTALRTEASLRN-W----GVLSKPVKEEVKMAVAYMGACSILHNSLLMREDFSAL 366
               ++ A +  A L++ W    GV+ KP K ++   +     C ILHN ++  ED   +
Sbjct: 305 VVETQMVAKKALARLKDMWKIIQGVMWKPDKHKLPRIIL---VCCILHNIVIDMEDEVLI 361

Query: 367 ATGFDFDYHEIHPQTHDHGQPCVSEDDPVA-NKALVMRNTLA 407
                       P  H H      +    A N A +MR  L+
Sbjct: 362 DM----------PSCHQHDSRYQDQTSEFADNTATIMREKLS 393