Miyakogusa Predicted Gene

Lj4g3v0599890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0599890.1 tr|C1FI28|C1FI28_MICSR Transcription initiation
factor IIE, alpha subunit OS=Micromonas sp. (strain
,33.5,4e-19,TFIIE_alpha,TFIIEalpha/SarR/Rpc3 HTH domain;
coiled-coil,NULL; Zinc beta-ribbon,NULL; HTH_TFE_IIE,Tr,CUFF.47640.1
         (206 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g07910.1                                                       395   e-110
Glyma17g13090.1                                                       385   e-107
Glyma06g23400.1                                                       377   e-105
Glyma18g23310.1                                                       369   e-102
Glyma06g23400.2                                                       205   3e-53

>Glyma05g07910.1 
          Length = 465

 Score =  395 bits (1015), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/199 (94%), Positives = 193/199 (96%)

Query: 7   KLVKLAARAFYDDLTSKGDNQPKSGGSDNRGIAVVVLYALTRRQWVREEDLAKDLKLHTK 66
           +LVKLAARAFYDDLTSKGDNQPK+G SDNRGIAVVVL ALTRRQWVREEDLAKDLKLHTK
Sbjct: 1   RLVKLAARAFYDDLTSKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTK 60

Query: 67  QLRRTLRFFEEEKIITRDHRRETAKGAKIYSAAVAATADSQQTGKEGEEKVKLHTHSYCC 126
           QLRRTLRFFEEEKIITRDHRRETAKGAKIYSAAVAATAD QQT KEGEEKVKLHTHSYCC
Sbjct: 61  QLRRTLRFFEEEKIITRDHRRETAKGAKIYSAAVAATADGQQTAKEGEEKVKLHTHSYCC 120

Query: 127 LDYAQIYDVTRYRLHRMKHKLKDELDNKNTLQEYICPNCAKRYNALDALRLISFEDEDFH 186
           LDYAQIYDV RYRLHRMKHKLKDEL+NKNTLQEYICPNC KRYNALDALRL+SFEDEDFH
Sbjct: 121 LDYAQIYDVIRYRLHRMKHKLKDELENKNTLQEYICPNCGKRYNALDALRLVSFEDEDFH 180

Query: 187 CESCNGKLEVESDKIAAQE 205
           CESCNG+LEVESDKIAAQE
Sbjct: 181 CESCNGRLEVESDKIAAQE 199


>Glyma17g13090.1 
          Length = 463

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/200 (91%), Positives = 189/200 (94%)

Query: 7   KLVKLAARAFYDDLTSKGDNQPKSGGSDNRGIAVVVLYALTRRQWVREEDLAKDLKLHTK 66
           +L+KL ARAFYDDLTS GDNQPK+G SDNRGIAVVVL ALTRRQWVREEDLAKDLKLHTK
Sbjct: 1   RLIKLGARAFYDDLTSTGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTK 60

Query: 67  QLRRTLRFFEEEKIITRDHRRETAKGAKIYSAAVAATADSQQTGKEGEEKVKLHTHSYCC 126
           QLRRTLRFFEEEKIITRDHRRETAKGAKIY AAVAATAD QQT KEGEEKVKLHTHSYCC
Sbjct: 61  QLRRTLRFFEEEKIITRDHRRETAKGAKIYGAAVAATADGQQTAKEGEEKVKLHTHSYCC 120

Query: 127 LDYAQIYDVTRYRLHRMKHKLKDELDNKNTLQEYICPNCAKRYNALDALRLISFEDEDFH 186
           LDYAQIYDV RYRLHRMKHKLKDEL+NKNTLQEYIC NC KRYNALDALRL+SFEDEDFH
Sbjct: 121 LDYAQIYDVIRYRLHRMKHKLKDELENKNTLQEYICSNCGKRYNALDALRLVSFEDEDFH 180

Query: 187 CESCNGKLEVESDKIAAQEG 206
           CESCNG+LEVESDKIA QEG
Sbjct: 181 CESCNGRLEVESDKIAVQEG 200


>Glyma06g23400.1 
          Length = 469

 Score =  377 bits (968), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 178/206 (86%), Positives = 191/206 (92%)

Query: 1   MIEPYNKLVKLAARAFYDDLTSKGDNQPKSGGSDNRGIAVVVLYALTRRQWVREEDLAKD 60
           M++ YNKLVKLAARAFYDDLTSKG+NQPKSG SDNRGIAVV+L ALTRRQWVREEDLAKD
Sbjct: 1   MVDHYNKLVKLAARAFYDDLTSKGENQPKSGRSDNRGIAVVILDALTRRQWVREEDLAKD 60

Query: 61  LKLHTKQLRRTLRFFEEEKIITRDHRRETAKGAKIYSAAVAATADSQQTGKEGEEKVKLH 120
           LKLHTKQLRRTLRFFEEEKIITR++RRETAKGAK+YSAA AAT D Q TGKEGEEKVKLH
Sbjct: 61  LKLHTKQLRRTLRFFEEEKIITREYRRETAKGAKMYSAATAATVDVQLTGKEGEEKVKLH 120

Query: 121 THSYCCLDYAQIYDVTRYRLHRMKHKLKDELDNKNTLQEYICPNCAKRYNALDALRLISF 180
           THSYCCLDYAQIYDV RYR+HRMK  LKDELDNKNT++EYIC  C KRYNALDALRL+SF
Sbjct: 121 THSYCCLDYAQIYDVVRYRIHRMKKLLKDELDNKNTIEEYICTKCGKRYNALDALRLVSF 180

Query: 181 EDEDFHCESCNGKLEVESDKIAAQEG 206
           ED+DFHCESCNGKLEVE+DK  AQEG
Sbjct: 181 EDDDFHCESCNGKLEVENDKFVAQEG 206


>Glyma18g23310.1 
          Length = 292

 Score =  369 bits (947), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/206 (85%), Positives = 190/206 (92%)

Query: 1   MIEPYNKLVKLAARAFYDDLTSKGDNQPKSGGSDNRGIAVVVLYALTRRQWVREEDLAKD 60
           M++ YNKLVKLAARAFYDDLTSKG+NQPKSG SDNRGIAVV+L ALTRRQWVREEDLAKD
Sbjct: 1   MVDHYNKLVKLAARAFYDDLTSKGENQPKSGRSDNRGIAVVILDALTRRQWVREEDLAKD 60

Query: 61  LKLHTKQLRRTLRFFEEEKIITRDHRRETAKGAKIYSAAVAATADSQQTGKEGEEKVKLH 120
           LKLHTKQLRRTLRFFEEEKIITR++RRE AKGAK+YSAA AAT D Q TGKEGEEKVKLH
Sbjct: 61  LKLHTKQLRRTLRFFEEEKIITREYRREAAKGAKMYSAATAATVDVQLTGKEGEEKVKLH 120

Query: 121 THSYCCLDYAQIYDVTRYRLHRMKHKLKDELDNKNTLQEYICPNCAKRYNALDALRLISF 180
           THSYCCLDYAQ+YDV RYR+HRMK  LKDELDNKNT++EYIC  C KRYNALDALRL+SF
Sbjct: 121 THSYCCLDYAQVYDVVRYRIHRMKKLLKDELDNKNTIEEYICRKCGKRYNALDALRLVSF 180

Query: 181 EDEDFHCESCNGKLEVESDKIAAQEG 206
           ED+DFHCESCNGKLEVESDK  AQEG
Sbjct: 181 EDDDFHCESCNGKLEVESDKFVAQEG 206


>Glyma06g23400.2 
          Length = 375

 Score =  205 bits (521), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 93/112 (83%), Positives = 100/112 (89%)

Query: 95  IYSAAVAATADSQQTGKEGEEKVKLHTHSYCCLDYAQIYDVTRYRLHRMKHKLKDELDNK 154
           +YSAA AAT D Q TGKEGEEKVKLHTHSYCCLDYAQIYDV RYR+HRMK  LKDELDNK
Sbjct: 1   MYSAATAATVDVQLTGKEGEEKVKLHTHSYCCLDYAQIYDVVRYRIHRMKKLLKDELDNK 60

Query: 155 NTLQEYICPNCAKRYNALDALRLISFEDEDFHCESCNGKLEVESDKIAAQEG 206
           NT++EYIC  C KRYNALDALRL+SFED+DFHCESCNGKLEVE+DK  AQEG
Sbjct: 61  NTIEEYICTKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVENDKFVAQEG 112