Miyakogusa Predicted Gene
- Lj4g3v0598860.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0598860.1 tr|B9HS12|B9HS12_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_821232 PE=4
SV=1,35.2,8e-18,seg,NULL,CUFF.47635.1
(287 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g33590.1 278 3e-75
Glyma14g09120.1 54 1e-07
Glyma17g36060.1 54 3e-07
>Glyma07g33590.1
Length = 266
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/240 (63%), Positives = 166/240 (69%), Gaps = 26/240 (10%)
Query: 51 DESARWTDQQHSLYLSSLEASFVNELHRSINLRGWSFQNNTDGAYKHRTLQKSVNMPKQS 110
D+S RWTDQQHSLY+ SLEASFVNELHRS+ L S +N+TD AYK R LQ S NMPKQS
Sbjct: 50 DQSTRWTDQQHSLYIRSLEASFVNELHRSMRLHHLSLKNSTDEAYKCRFLQNSHNMPKQS 109
Query: 111 LALQDGCQKKTKLERIAPMLESTADSHVHAGSQLGLIPIDRACSLKEHHTYDHDLPCDEE 170
LALQDGCQKK LER+APMLESTADSHV AGSQ L +D CSL+E H L CDEE
Sbjct: 110 LALQDGCQKKINLERVAPMLESTADSHVLAGSQFKLTSVDGGCSLRE-----HGLLCDEE 164
Query: 171 IHAKGSLPFTNKSPRSSAKKQCLFPSFHAESSCSSAEVTDQNFKDEVASSSTMPMAKRLK 230
IHA+GS FT E +CSS EVTDQNFKDE A SS MP+ KRLK
Sbjct: 165 IHARGSSIFT------------------LEMACSSTEVTDQNFKDEDARSSCMPLVKRLK 206
Query: 231 TAAADGSSRDQVVPFEKFHTSDV---SNATSEKKEHELQSELRASIHIPKSDLRYFLKGR 287
TA AD SS DQVVPF K HT DV SNA+SE K HEL SE S H P SDL YFL+GR
Sbjct: 207 TATADSSSTDQVVPFGKVHTPDVSTSSNASSENKGHELLSEPPVSYHFPTSDLPYFLRGR 266
>Glyma14g09120.1
Length = 208
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 39/199 (19%)
Query: 56 WTDQQHSLYLSSLEASFVNELHRSINLRGWSFQNNTDGAYKHRTLQKSVNMPKQSLALQD 115
WTD++HS+Y+ S+EASFVN+L+ S ++ T G +K L+
Sbjct: 33 WTDEKHSMYIKSIEASFVNQLYDSKQMKTSYDSATTSGQFK---------------VLRG 77
Query: 116 GCQKKTKLERIAP----------MLESTADSHVHAGSQLGLIPIDRACSLKEHHTYDHDL 165
GC +K ER+ P ++E+ H S+ I A SL+E T ++
Sbjct: 78 GCWQKINFERVNPQMSRINQCHDLMENPWIQHYRFSSKQRSIV---APSLQESVTTTSNV 134
Query: 166 PCDEEIHAKGSLPFTNKSPRSSAKKQCLFPSFHAESSCSSAEVTDQNFKDE---VASSST 222
++ + +P + + C H + CS E++DQNF DE +
Sbjct: 135 V---DLGQRKGVPSGSGHLHLCESRIC-----HKDMLCSDTEMSDQNFVDEEVKGKKQNK 186
Query: 223 MPMAKRLKTAAADGSSRDQ 241
KR ++ +D S DQ
Sbjct: 187 KSKVKRQRSLISDAQSNDQ 205
>Glyma17g36060.1
Length = 231
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 39/205 (19%)
Query: 56 WTDQQHSLYLSSLEASFVNELHRSINLRGWSFQNNTDGAYKHRTLQKSVNMPKQSLALQD 115
WTD++HS+Y+ S+EASFVN+L+ S ++ T G +K L+
Sbjct: 38 WTDEKHSMYIKSIEASFVNQLYDSKQMKTSYDPATTSGQFK---------------VLRG 82
Query: 116 GCQKKTKLERIAP----------MLESTADSHVHAGSQLGLIPIDRACSLKEHHTYDHDL 165
GC +K ER+ P + E+ H + S+ I + SL+E T +
Sbjct: 83 GCWQKINFERVNPQTSRINQCHDLTENPWIQHYRSSSKQRSIAVS---SLQESVTTTSKV 139
Query: 166 PCDEEIHAKGSLPFTNKSPRSSAKKQCLFPSFHAESSCSSAEVTDQNFKDE---VASSST 222
++ + +P + + C H + S E++DQNF DE +
Sbjct: 140 V---DLGQRKGVPSGSGHLHLCESRVC-----HKDMLYSDTEMSDQNFVDEEVKGKKQNK 191
Query: 223 MPMAKRLKTAAADGSSRDQVVPFEK 247
KR ++ +D DQ+VP K
Sbjct: 192 KSKVKRQRSLISDAQDNDQMVPNRK 216