Miyakogusa Predicted Gene

Lj4g3v0536640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0536640.1 Non Chatacterized Hit- tr|D8R372|D8R372_SELML
Putative uncharacterized protein OS=Selaginella moelle,30.9,4e-18,
,CUFF.47576.1
         (235 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g15430.1                                                       299   2e-81
Glyma07g33050.1                                                       298   2e-81

>Glyma02g15430.1 
          Length = 200

 Score =  299 bits (765), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 145/201 (72%), Positives = 168/201 (83%), Gaps = 2/201 (0%)

Query: 36  MNSALLHPCSTPLFLEA-KDLYRNNRKLASTICCSSSRNDPYIPKLEPFSRSKSERAAKD 94
           M + LL PCS PL L+   +   +  + AST+ C SS+N PYIPKLEPFSR+K ERA KD
Sbjct: 1   MKATLLRPCSGPLILDTHSNRTSSTMRHASTVVCCSSKNQPYIPKLEPFSRTKFERAVKD 60

Query: 95  PPLIEKSEKELLDYCSAVEGEESYSCWQAYFELKDLEKESPKSDIERLILETGGVKSLVG 154
           PPLIEKSEKE+LDYCS +EG++SYSCWQAYFELKDLEKESP++DIERLILETGGVKSL+G
Sbjct: 61  PPLIEKSEKEILDYCSTLEGDQSYSCWQAYFELKDLEKESPRADIERLILETGGVKSLIG 120

Query: 155 VLHGIALMHKLKKEGLNFAKEVKSEEEHIHNCPIPDGLPKSADEMMEEEQGRMPDSPYTR 214
            LHGI++MHK+KK  +N +K+VKSEE     CPIPDGLPKSADE+ EEEQ RMPDSPYT+
Sbjct: 121 CLHGISIMHKVKKGDMNLSKDVKSEEGE-RMCPIPDGLPKSADELREEEQARMPDSPYTK 179

Query: 215 LLRTMGRFPAWYSQAPDHETD 235
           LLRTMGR PAWYS APDHETD
Sbjct: 180 LLRTMGRHPAWYSPAPDHETD 200


>Glyma07g33050.1 
          Length = 200

 Score =  298 bits (764), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 147/201 (73%), Positives = 168/201 (83%), Gaps = 2/201 (0%)

Query: 36  MNSALLHPCST-PLFLEAKDLYRNNRKLASTICCSSSRNDPYIPKLEPFSRSKSERAAKD 94
           M + LL PCS+ PL L+      +  + AST+ C SSRN PYIPKLEPFSR+K ERA KD
Sbjct: 1   MKATLLCPCSSAPLILDTHSNRTSATRHASTVVCCSSRNQPYIPKLEPFSRTKFERAVKD 60

Query: 95  PPLIEKSEKELLDYCSAVEGEESYSCWQAYFELKDLEKESPKSDIERLILETGGVKSLVG 154
           PPLIEKSE+E+LDYCS +EG++SYSCWQAYFELKDLEKESPK+DIERLILETGGVKSL+G
Sbjct: 61  PPLIEKSEREILDYCSTLEGDQSYSCWQAYFELKDLEKESPKADIERLILETGGVKSLIG 120

Query: 155 VLHGIALMHKLKKEGLNFAKEVKSEEEHIHNCPIPDGLPKSADEMMEEEQGRMPDSPYTR 214
            LHGI++MHKLKK  +N +K+VKSEE     CPIPDGLPKSADE+ EEEQ RMPDSPYT+
Sbjct: 121 CLHGISIMHKLKKGDMNLSKDVKSEEGE-RLCPIPDGLPKSADELREEEQARMPDSPYTK 179

Query: 215 LLRTMGRFPAWYSQAPDHETD 235
           LLRTMGR PAWYS APDHETD
Sbjct: 180 LLRTMGRHPAWYSPAPDHETD 200