Miyakogusa Predicted Gene

Lj4g3v0523550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0523550.1 Non Chatacterized Hit- tr|A5BRP5|A5BRP5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,80.95,0.000000000002,5'-3' exonuclease,5'-3' exonuclease,
N-terminal; Helix-hairpin-helix class 2 (Pol1 family)
mo,Helix-,CUFF.47566.1
         (430 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g33020.1                                                       446   e-125
Glyma02g15470.1                                                       444   e-124
Glyma16g27270.1                                                        81   2e-15

>Glyma07g33020.1 
          Length = 247

 Score =  446 bits (1147), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/253 (86%), Positives = 234/253 (92%), Gaps = 11/253 (4%)

Query: 183 KGQNFRHNLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIE-----VPGVEADDVIG 237
           +GQNFRHNLYP+YKSNRPPTPDTIVQGLQY KASIKAMSIK+IE     VPGVEADDVIG
Sbjct: 1   EGQNFRHNLYPAYKSNRPPTPDTIVQGLQYFKASIKAMSIKIIEANFKGVPGVEADDVIG 60

Query: 238 TLALRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGDQMVSFGVEDFAKRYGGLEPS 297
           TLALRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGDQMVSFGVEDF +RYGGL+PS
Sbjct: 61  TLALRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGDQMVSFGVEDFEERYGGLKPS 120

Query: 298 QFADMIALSGDRSDNIPGVHGIGDVHAVQLISKFGTLERLLESVDQVKEDRIRKALIANA 357
           QFADMIAL+GDRSDNIPGVHGIGDVHAVQLIS+FGTLERLL+SVDQ+KEDRI+KALI NA
Sbjct: 121 QFADMIALTGDRSDNIPGVHGIGDVHAVQLISRFGTLERLLDSVDQIKEDRIKKALIENA 180

Query: 358 EQALLSKELALLRSDLPLYMVPFSVRDLSFKKPEDDGSKFNSLLTAISAYAEGFSADPII 417
           EQA      ALLRSDLPLYMVP ++RDLSF KPED+GSKFNSLLTAISAYAEGFSADPII
Sbjct: 181 EQA------ALLRSDLPLYMVPLAIRDLSFNKPEDNGSKFNSLLTAISAYAEGFSADPII 234

Query: 418 RRAFHLWRKLESR 430
           RR  HLW KL+SR
Sbjct: 235 RRTVHLWGKLDSR 247


>Glyma02g15470.1 
          Length = 354

 Score =  444 bits (1141), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/292 (76%), Positives = 249/292 (85%), Gaps = 13/292 (4%)

Query: 144 LSLIIDVLEFLPSHVVVVFDHDGVPFRHVNNSSKESFTAKGQNFRHNLYPSYKSNRPPTP 203
           L +I+  L     HV++   H  +   +V N +      +GQNFRHNLYP+YKSNRPPTP
Sbjct: 71  LLIIVGSLPVFVDHVLL--QHFVLQLHNVMNINFMCTLFEGQNFRHNLYPAYKSNRPPTP 128

Query: 204 DTIVQGLQYLKASIKAMSIKVIE-----VPGVEADDVIGTLALRSVDAGYKVRVVSPDKD 258
           DTIVQGLQY KASIKAMSIK+IE     VPGVEADDVIGTLALRSVDAGYKVRVVSPDKD
Sbjct: 129 DTIVQGLQYFKASIKAMSIKIIEANFKGVPGVEADDVIGTLALRSVDAGYKVRVVSPDKD 188

Query: 259 FFQILSPSLRLLRIAPRGDQMVSFGVEDFAKRYGGLEPSQFADMIALSGDRSDNIPGVHG 318
           FFQILSPSLRLLRIAPRGD+MVSFGVEDF +RYGGL+PSQFADMIAL+GDRSDNIPGVHG
Sbjct: 189 FFQILSPSLRLLRIAPRGDEMVSFGVEDFEERYGGLKPSQFADMIALTGDRSDNIPGVHG 248

Query: 319 IGDVHAVQLISKFGTLERLLESVDQVKEDRIRKALIANAEQALLSKELALLRSDLPLYMV 378
           IGDVHAVQL+S+FGTLERLL+SVDQ+KED I+KALI NAEQA      ALLRSDLPLYMV
Sbjct: 249 IGDVHAVQLLSRFGTLERLLDSVDQIKEDHIKKALIENAEQA------ALLRSDLPLYMV 302

Query: 379 PFSVRDLSFKKPEDDGSKFNSLLTAISAYAEGFSADPIIRRAFHLWRKLESR 430
           P +++DLSF KPED+GSKFNSLLTAISAYAEGFSADPIIRR  HLW+KL+SR
Sbjct: 303 PLAIKDLSFNKPEDNGSKFNSLLTAISAYAEGFSADPIIRRTVHLWQKLDSR 354


>Glyma16g27270.1 
          Length = 320

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 18/213 (8%)

Query: 183 KGQNFRHNLYPSYKSNRPP-----------TPDTIVQGLQYLKASIKAMSIKVIEVPGVE 231
           +G   R  L PSYK++R             +   + + LQ +   +   ++ VI+V G E
Sbjct: 69  RGSEHRRKLLPSYKAHRRKFTRHISSLQRFSSGHVGRSLQVINDVLGKCNVPVIKVDGHE 128

Query: 232 ADDVIGTLALRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGDQMVSFGVEDFAKRY 291
           ADDV+ TLA + ++ G++V + SPDKDF Q++S  ++++   P   +   + +  +  +Y
Sbjct: 129 ADDVVATLAGQVLNKGFRVVIASPDKDFKQLISDDVQIVMPLPELQRWSFYTLRHYRDQY 188

Query: 292 GGLEPSQFADMIALSGDRSDNIPGVHGI----GDVHAVQLISKFGTLERLLE--SVDQVK 345
              +P     +  + GD  D +PG+  +    G   A++LI K G+LE LL   ++  V 
Sbjct: 189 -NCDPESDLSLRCIVGDEVDGVPGIQHLVPSFGRKTALKLIKKHGSLETLLNAAAIRTVG 247

Query: 346 EDRIRKALIANAEQALLSKELALLRSDLPLYMV 378
               + AL  +A+    + E+  L+ D+ + ++
Sbjct: 248 RPYAQDALKNHADYLRRNYEVLALKRDVNVQLI 280