Miyakogusa Predicted Gene

Lj4g3v0510070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0510070.1 Non Chatacterized Hit- tr|Q5GAR1|Q5GAR1_MAIZE
Putative uncharacterized protein OS=Zea mays GN=B9008
,50.62,0.0000000001,seg,NULL; coiled-coil,NULL,CUFF.47529.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g15700.1                                                       176   8e-45
Glyma07g32740.1                                                       174   4e-44

>Glyma02g15700.1 
          Length = 198

 Score =  176 bits (447), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 86/106 (81%), Positives = 88/106 (83%)

Query: 1   MGKNQAYKAMQRARLGGASAGPDEVEDGMVDGSFHSPEWHAARLASLKTSHTVTWXXXXX 60
           MGKNQAYKAMQRARLGGASAGPDEVEDGMVDGSFHSPEWHAARLASL TSHT+TW     
Sbjct: 1   MGKNQAYKAMQRARLGGASAGPDEVEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYKM 60

Query: 61  XXXXXXXXXXXLEADADRMMREYRAQLDAERSRKLSQGRNHSGSKS 106
                      LEADADRMMREYRAQLDAER+RKLSQGRNHS SKS
Sbjct: 61  KQKEEELRKGELEADADRMMREYRAQLDAERARKLSQGRNHSNSKS 106


>Glyma07g32740.1 
          Length = 197

 Score =  174 bits (440), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 86/106 (81%), Positives = 88/106 (83%)

Query: 1   MGKNQAYKAMQRARLGGASAGPDEVEDGMVDGSFHSPEWHAARLASLKTSHTVTWXXXXX 60
           MGKNQAYKAMQRARLGGASAGPDEVEDGMVDGSFHSPEWHAARLASL TSHT+TW     
Sbjct: 1   MGKNQAYKAMQRARLGGASAGPDEVEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYKK 60

Query: 61  XXXXXXXXXXXLEADADRMMREYRAQLDAERSRKLSQGRNHSGSKS 106
                      LEADADRMMREYRAQLDAER+RKLSQGRNHS SKS
Sbjct: 61  KQKEEELRKGELEADADRMMREYRAQLDAERARKLSQGRNHSSSKS 106