Miyakogusa Predicted Gene

Lj4g3v0510040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0510040.1 CUFF.47527.1
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g16830.1                                                        84   4e-17
Glyma09g05510.1                                                        84   4e-17

>Glyma15g16830.1 
          Length = 483

 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/126 (43%), Positives = 68/126 (53%), Gaps = 8/126 (6%)

Query: 1   MEIPLELMLTISKKLPWMXXXXXXXXXXXXXXXXNPASPETDXXXXXXXXXXYAFDCQEN 60
           MEIPLELMLTISKKLPWM                N  +PETD          YAFDC+ N
Sbjct: 119 MEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIINSTNPETDWDLRLACLLLYAFDCEGN 178

Query: 61  FWQLYGDFLPSADESTSLFIATEVLLQQSQGCDFSPSLSMNTK--------GWYWLLSLK 112
           FWQLYGDFLPSADE TSL +A+E  L + Q  D + ++    +         W+  + LK
Sbjct: 179 FWQLYGDFLPSADECTSLLLASEEELLELQDPDLASTIRKQQQRSLEFWENNWHSDVPLK 238

Query: 113 VWCVWR 118
           +  + R
Sbjct: 239 IKRLAR 244


>Glyma09g05510.1 
          Length = 482

 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/98 (52%), Positives = 59/98 (60%)

Query: 1   MEIPLELMLTISKKLPWMXXXXXXXXXXXXXXXXNPASPETDXXXXXXXXXXYAFDCQEN 60
           MEIPLELMLTISKKLPWM                N  +PETD          YAFDC+ N
Sbjct: 118 MEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIINSTNPETDWDLRLACLLLYAFDCEGN 177

Query: 61  FWQLYGDFLPSADESTSLFIATEVLLQQSQGCDFSPSL 98
           FWQLYGDFLPSADE TSL +A+E  L + Q  D + ++
Sbjct: 178 FWQLYGDFLPSADECTSLLLASEEELLELQDSDLASTI 215