Miyakogusa Predicted Gene

Lj4g3v0496570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0496570.1 Non Chatacterized Hit- tr|I1HRP6|I1HRP6_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,44.44,3e-18,seg,NULL,CUFF.47499.1
         (488 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g24030.1                                                       245   9e-65

>Glyma13g24030.1 
          Length = 490

 Score =  245 bits (625), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 172/397 (43%), Positives = 209/397 (52%), Gaps = 74/397 (18%)

Query: 65  MNFDLDGDFGKMSSFKVDMSDLDFTSPPKKSSQPTDXXXXXXXXXXXXQDGXXXXXXXXX 124
           MNF+LDG+F K+SSFK+DMSDLDFT P KK+SQ  D            QDG         
Sbjct: 1   MNFNLDGEFNKISSFKLDMSDLDFTCPAKKNSQSKDKKGEVSGSQEGKQDGFNFSFDFNE 60

Query: 125 XXXXXXXXXXXXXXXXXNTKHNQRKNEFTTEGNDTEGAKKPKINDEKGVHGSNDNIAMKP 184
                            N+  + RK   TTEG+D EG +  K ND++G   SND+  +K 
Sbjct: 61  LGSFNFDSSFMKVVTTSNS--SPRKKGVTTEGSDKEGGEMLKTNDDEGARASNDSTTVKS 118

Query: 185 QASEKVKTLKVETSVGSLGNLVSRQNGSASK-SSSGNLELSTENQTPDISKSISTEEMNH 243
            AS +++T KVET VGS GNLVS+Q+GS SK SSSGNL++  ENQT DI+K  STEE++ 
Sbjct: 119 HASVRLETSKVETVVGSPGNLVSKQDGSVSKISSSGNLDMPMENQTLDINKHKSTEEIDQ 178

Query: 244 EIDLSEKTPPTESKSEKVIHMAPSRSVSQSDSEQDTISEQHKEVISSGTRVINVSGDKQE 303
           E DL EK+  T SKSE+VI+MA S+SV                            GD QE
Sbjct: 179 ERDLPEKSNLTGSKSEQVINMASSQSV----------------------------GDIQE 210

Query: 304 VNDKAKYVDSDGADLQLERSPPPHIPNSDGIVGEATNIGSRIK-GVTNDPQPEKNFTSCG 362
           VNDKA  V SD  DLQLE S P H+  SD  VGEA  +GS  + GVT+DPQPEK      
Sbjct: 211 VNDKATNVKSDSVDLQLEHSSPHHVTKSDSSVGEAITLGSSTQEGVTSDPQPEK------ 264

Query: 363 NIKKTDVLKNNLHDSDIRENNKSSLECHLATSSSKPIDDKIMQMKDKGLPVMQ---LSIP 419
                                            SKP+ +K+M MKDK L  +Q    S P
Sbjct: 265 ---------------------------------SKPVVEKMMLMKDKKLQDLQSNMFSTP 291

Query: 420 EDKMSFMHPSSTVGTQSFSFGCNKNADIHLRSKTQAR 456
           E K S   PSST+GT+  S G  KN DI L S TQAR
Sbjct: 292 EGKRSLKQPSSTIGTKGSSLGNEKNIDILLGSITQAR 328