Miyakogusa Predicted Gene

Lj4g3v0496490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0496490.1 Non Chatacterized Hit- tr|H3GLP9|H3GLP9_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,30.11,4e-18,CHAPERONE ATP11,ATP11; ATP11,ATP11,CUFF.47489.1
         (249 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g12960.1                                                       428   e-120
Glyma06g44620.1                                                       340   9e-94
Glyma04g34240.1                                                       212   3e-55

>Glyma12g12960.1 
          Length = 251

 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/251 (81%), Positives = 221/251 (88%), Gaps = 2/251 (0%)

Query: 1   MQRVSSISRFLRSIASETKTQVLF-NEP-CRRAFSVVSIGAASQKSHQPEIPCDFQKWGS 58
           MQRVS  S   R+I S+ +  V F N+P   R+FS V + AA++K HQPEIP DFQKWGS
Sbjct: 1   MQRVSPTSTIWRTIVSKARKNVFFINDPFAARSFSAVPVVAAAKKLHQPEIPSDFQKWGS 60

Query: 59  LGFCRTSRFATGFSPLQRKPLDSIVDVERLKVRDPEDIASAWDDYHIGRGHIGATMKAKL 118
           +GFCRTS+FA+GF+PLQ KPLDSIVDV RLK R PEDIAS WDDYHIGRGHIGATMKAKL
Sbjct: 61  VGFCRTSKFASGFNPLQPKPLDSIVDVHRLKDRYPEDIASVWDDYHIGRGHIGATMKAKL 120

Query: 119 YHLLEHRASECRYFVIPLWRGSGYTSMFVQAQAPHMIFTGLEDYKARGTQASPYFTVTFY 178
           YHLLEHRASECRYFVIPLWRGSGYT+MFVQ Q PHMIFTGLEDYKARGTQA+PYFT+TFY
Sbjct: 121 YHLLEHRASECRYFVIPLWRGSGYTTMFVQVQTPHMIFTGLEDYKARGTQAAPYFTLTFY 180

Query: 179 TEFAESKDLVLIRGDVVFTSKLTDSEAKWLLETAQSFYLNDVRYKLVERFNRQTREFEFK 238
           TEFAESKDLVLIRGDVVFTSKLTD EAKWLLETAQSFYLND RYKLVERFNRQT +FEFK
Sbjct: 181 TEFAESKDLVLIRGDVVFTSKLTDPEAKWLLETAQSFYLNDARYKLVERFNRQTHDFEFK 240

Query: 239 DVLQALDMPIL 249
           DVLQ LDMPIL
Sbjct: 241 DVLQVLDMPIL 251


>Glyma06g44620.1 
          Length = 271

 Score =  340 bits (872), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 170/242 (70%), Positives = 185/242 (76%), Gaps = 35/242 (14%)

Query: 41  SQKSHQPEIPCDFQKWGSLGFCRTSRFATGFSPLQRKPLD------SIVDVERLKVR--- 91
           ++K HQPEIP  FQKWGS+GF RTS+FA+GF+PLQRKPLD      +  D+ R + R   
Sbjct: 32  TRKLHQPEIPSSFQKWGSVGFFRTSKFASGFNPLQRKPLDLGRIWSTAEDLGRNRARVLS 91

Query: 92  ------------------------DPEDIASAWDDYHIGRGHIGATMKAKLYHLLEHRAS 127
                                     E  A  W  YHIGRGHIGATMKAKLYHLLEHRAS
Sbjct: 92  LYRQILRGLNSPELRLGFAARLAKKAEARAMFW--YHIGRGHIGATMKAKLYHLLEHRAS 149

Query: 128 ECRYFVIPLWRGSGYTSMFVQAQAPHMIFTGLEDYKARGTQASPYFTVTFYTEFAESKDL 187
           ECRYFVIPLWRGSGYT+MF+Q Q  HM+FTGLEDYKARGTQA+PYFTV+FYTEFAESKDL
Sbjct: 150 ECRYFVIPLWRGSGYTTMFIQVQTQHMVFTGLEDYKARGTQAAPYFTVSFYTEFAESKDL 209

Query: 188 VLIRGDVVFTSKLTDSEAKWLLETAQSFYLNDVRYKLVERFNRQTREFEFKDVLQALDMP 247
           VLIRGDVVFTSKLTDSEAKWLLE AQSFYLND RYKLVERFNRQT +FEFKDVLQ LDMP
Sbjct: 210 VLIRGDVVFTSKLTDSEAKWLLEAAQSFYLNDARYKLVERFNRQTHDFEFKDVLQVLDMP 269

Query: 248 IL 249
           IL
Sbjct: 270 IL 271


>Glyma04g34240.1 
          Length = 171

 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/164 (67%), Positives = 122/164 (74%), Gaps = 17/164 (10%)

Query: 103 YHIGRGHIGATMKAKLYHLL------------EHRASECRYFVI-----PLWRGSGYTSM 145
           Y IGRGHIGATMKAKLY+LL            E    +C + +I     P  R +   + 
Sbjct: 8   YDIGRGHIGATMKAKLYYLLFYPIFLSFLYGGEVDTRQCLFKLIHVLPEPGERDAVLVTY 67

Query: 146 FVQAQAPHMIFTGLEDYKARGTQASPYFTVTFYTEFAESKDLVLIRGDVVFTSKLTDSEA 205
             + Q PHM+ TGLEDYKARGTQA+PYF V+FYTEFAESKDLVLIRGDVVFTSKLTDSEA
Sbjct: 68  IKRFQTPHMVSTGLEDYKARGTQAAPYFIVSFYTEFAESKDLVLIRGDVVFTSKLTDSEA 127

Query: 206 KWLLETAQSFYLNDVRYKLVERFNRQTREFEFKDVLQALDMPIL 249
           KWLLE AQSFYLND RYKLVERF RQT +FEFKDVLQ LDMPIL
Sbjct: 128 KWLLEAAQSFYLNDARYKLVERFKRQTHDFEFKDVLQVLDMPIL 171