Miyakogusa Predicted Gene

Lj4g3v0484690.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0484690.3 Non Chatacterized Hit- tr|B4FIA3|B4FIA3_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,58.89,4e-17,DUF2930,Protein of unknown function
DUF2930,CUFF.47407.3
         (225 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g32270.3                                                       345   2e-95
Glyma16g32270.1                                                       345   2e-95
Glyma16g32270.2                                                       289   2e-78
Glyma09g27010.1                                                       201   4e-52
Glyma09g26980.1                                                       201   7e-52

>Glyma16g32270.3 
          Length = 287

 Score =  345 bits (886), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 180/222 (81%), Positives = 195/222 (87%), Gaps = 2/222 (0%)

Query: 4   LSSICFKPCVPSKVLYPRTSSTKF-TTMVRASLQDPQPPNTSQQQQ-LNLSVLRFTLGIP 61
           ++ +CFKPC+PS +L PRTS  KF  T+ R SLQD Q     QQQQ LNLSVLRFTLGIP
Sbjct: 1   MNIVCFKPCIPSSLLCPRTSFRKFPLTIPRFSLQDSQQQQQQQQQQQLNLSVLRFTLGIP 60

Query: 62  GFDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGMSLASFSIVLPYLGKFL 121
           G DESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLG+SLASFSIVLPYLGKFL
Sbjct: 61  GLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGLSLASFSIVLPYLGKFL 120

Query: 122 KGAQPVDRTTLPDGTQQIFVMSTDIVDGLKEDLAWASYILLRNSNAIAALIFIQGDICAR 181
           KGAQPVD  T+PDGT+QIFVMSTD VDGLKEDLAWASY+LL N+NAIA LIFIQG+ICAR
Sbjct: 121 KGAQPVDEKTIPDGTEQIFVMSTDRVDGLKEDLAWASYVLLCNTNAIAMLIFIQGEICAR 180

Query: 182 GYWNITDDSSTEILLGFFKKKVENARLYDLKDTLYFPQDAGS 223
           GYWNI DD+S EIL G+FKKK+ENA LYDLKDTLYFPQDA S
Sbjct: 181 GYWNIPDDTSKEILPGWFKKKIENAGLYDLKDTLYFPQDADS 222


>Glyma16g32270.1 
          Length = 289

 Score =  345 bits (885), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 180/222 (81%), Positives = 195/222 (87%), Gaps = 2/222 (0%)

Query: 4   LSSICFKPCVPSKVLYPRTSSTKF-TTMVRASLQDPQPPNTSQQQQ-LNLSVLRFTLGIP 61
           ++ +CFKPC+PS +L PRTS  KF  T+ R SLQD Q     QQQQ LNLSVLRFTLGIP
Sbjct: 1   MNIVCFKPCIPSSLLCPRTSFRKFPLTIPRFSLQDSQQQQQQQQQQQLNLSVLRFTLGIP 60

Query: 62  GFDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGMSLASFSIVLPYLGKFL 121
           G DESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLG+SLASFSIVLPYLGKFL
Sbjct: 61  GLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGLSLASFSIVLPYLGKFL 120

Query: 122 KGAQPVDRTTLPDGTQQIFVMSTDIVDGLKEDLAWASYILLRNSNAIAALIFIQGDICAR 181
           KGAQPVD  T+PDGT+QIFVMSTD VDGLKEDLAWASY+LL N+NAIA LIFIQG+ICAR
Sbjct: 121 KGAQPVDEKTIPDGTEQIFVMSTDRVDGLKEDLAWASYVLLCNTNAIAMLIFIQGEICAR 180

Query: 182 GYWNITDDSSTEILLGFFKKKVENARLYDLKDTLYFPQDAGS 223
           GYWNI DD+S EIL G+FKKK+ENA LYDLKDTLYFPQDA S
Sbjct: 181 GYWNIPDDTSKEILPGWFKKKIENAGLYDLKDTLYFPQDADS 222


>Glyma16g32270.2 
          Length = 263

 Score =  289 bits (739), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/222 (70%), Positives = 171/222 (77%), Gaps = 26/222 (11%)

Query: 4   LSSICFKPCVPSKVLYPRTSSTKFT-TMVRASLQDPQPPNTSQQQQ-LNLSVLRFTLGIP 61
           ++ +CFKPC+PS +L PRTS  KF  T+ R SLQD Q     QQQQ LNLSVLRFTLGIP
Sbjct: 1   MNIVCFKPCIPSSLLCPRTSFRKFPLTIPRFSLQDSQQQQQQQQQQQLNLSVLRFTLGIP 60

Query: 62  GFDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGMSLASFSIVLPYLGKFL 121
           G DESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQL                       
Sbjct: 61  GLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQL----------------------- 97

Query: 122 KGAQPVDRTTLPDGTQQIFVMSTDIVDGLKEDLAWASYILLRNSNAIAALIFIQGDICAR 181
            GAQPVD  T+PDGT+QIFVMSTD VDGLKEDLAWASY+LL N+NAIA LIFIQG+ICAR
Sbjct: 98  -GAQPVDEKTIPDGTEQIFVMSTDRVDGLKEDLAWASYVLLCNTNAIAMLIFIQGEICAR 156

Query: 182 GYWNITDDSSTEILLGFFKKKVENARLYDLKDTLYFPQDAGS 223
           GYWNI DD+S EIL G+FKKK+ENA LYDLKDTLYFPQDA S
Sbjct: 157 GYWNIPDDTSKEILPGWFKKKIENAGLYDLKDTLYFPQDADS 198


>Glyma09g27010.1 
          Length = 115

 Score =  201 bits (512), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 98/114 (85%), Positives = 104/114 (91%)

Query: 56  FTLGIPGFDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGMSLASFSIVLP 115
           F  GI G DESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLG+SLASFSIVLP
Sbjct: 1   FATGILGLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGLSLASFSIVLP 60

Query: 116 YLGKFLKGAQPVDRTTLPDGTQQIFVMSTDIVDGLKEDLAWASYILLRNSNAIA 169
           YLGKFLKGAQP+D  T+PD T+QIF MSTDIVD LKEDLAWASY+LLRN+N IA
Sbjct: 61  YLGKFLKGAQPMDEKTIPDDTEQIFFMSTDIVDCLKEDLAWASYVLLRNTNVIA 114


>Glyma09g26980.1 
          Length = 115

 Score =  201 bits (510), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 97/114 (85%), Positives = 104/114 (91%)

Query: 56  FTLGIPGFDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGMSLASFSIVLP 115
           F  GI G DESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLST+VLG+SL SFSIVLP
Sbjct: 1   FATGILGLDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTKVLGLSLVSFSIVLP 60

Query: 116 YLGKFLKGAQPVDRTTLPDGTQQIFVMSTDIVDGLKEDLAWASYILLRNSNAIA 169
           YLGKFLKGAQP+D  T+PD T+QIFVMSTDIVD LKEDLAWASY+LLRN+N IA
Sbjct: 61  YLGKFLKGAQPMDEKTIPDDTEQIFVMSTDIVDCLKEDLAWASYVLLRNTNVIA 114