Miyakogusa Predicted Gene

Lj4g3v0483910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0483910.1 tr|B9P619|B9P619_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_829141 PE=4
SV=1,49.6,4e-16,seg,NULL,NODE_99899_length_735_cov_15.107483.path2.1
         (143 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g32140.1                                                       159   8e-40
Glyma13g24400.1                                                       159   1e-39
Glyma18g38620.1                                                        52   2e-07

>Glyma07g32140.1 
          Length = 143

 Score =  159 bits (403), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 86/133 (64%), Positives = 100/133 (75%), Gaps = 4/133 (3%)

Query: 1   MVSENEEMPSGWPFGLGFLNMRLRIAESLAAAPAEPYSVHIPXXXXXXXXXXXLDTESTA 60
           MVSEN+EMP GWPFGLGFLNMRLR AESL AAP EP+S+H+P           LDTESTA
Sbjct: 1   MVSENDEMPIGWPFGLGFLNMRLRDAESLPAAPVEPHSMHVPSTSFSSFSSSNLDTESTA 60

Query: 61  SFFQDKSVSLGYLIGIRQGERRRLHLGNSLRFEEME-MKTLAKGSCS-EASKLEEMCMCM 118
           SFFQD SVSLG+LIG+R GE+  L+  N+LR EE E  KTLA GSCS +AS+++E  + M
Sbjct: 61  SFFQDNSVSLGHLIGLRPGEKGSLYFPNTLRLEEREKKKTLANGSCSHDASEVKE--VDM 118

Query: 119 SCGICIPKLLNAL 131
           S GICIP LL AL
Sbjct: 119 SRGICIPILLEAL 131


>Glyma13g24400.1 
          Length = 143

 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 87/133 (65%), Positives = 99/133 (74%), Gaps = 4/133 (3%)

Query: 1   MVSENEEMPSGWPFGLGFLNMRLRIAESLAAAPAEPYSVHIPXXXXXXXXXXXLDTESTA 60
           MVSEN+EMP GWPFGLGFLNMR R AESL AAP EP+S+HIP           LDTESTA
Sbjct: 1   MVSENDEMPIGWPFGLGFLNMRFRDAESLPAAPVEPHSMHIPSTSFSSFSSSNLDTESTA 60

Query: 61  SFFQDKSVSLGYLIGIRQGERRRLHLGNSLRFEEME-MKTLAKGSCS-EASKLEEMCMCM 118
           SFFQD SVSLG+LIG+R GE+ RL+  N+LR EE E  KTLA  SCS +ASK++E  + M
Sbjct: 61  SFFQDNSVSLGHLIGLRPGEKGRLYFPNTLRLEETEKKKTLANCSCSDDASKVKE--VDM 118

Query: 119 SCGICIPKLLNAL 131
           S GICIP LL AL
Sbjct: 119 SRGICIPILLEAL 131


>Glyma18g38620.1 
          Length = 186

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 11 GWPFGLGFLNMRLRIAESLAAAPAEPYSVHIPXXXXXXXXXXXLDTESTASFFQDKSVSL 70
          GWP GL FLN R+ +  +  +  A   +V              LDTE+T SFF D S++L
Sbjct: 7  GWPLGLRFLNSRIELMRN-GSGSASFSTVLTASHTPSTDSSSDLDTEATGSFFHDNSITL 65

Query: 71 GYLIGI 76
          G LIGI
Sbjct: 66 GSLIGI 71