Miyakogusa Predicted Gene
- Lj4g3v0473620.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0473620.1 Non Chatacterized Hit- tr|I1MEM6|I1MEM6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,39.35,3e-18,seg,NULL,CUFF.47431.1
(297 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g32150.1 73 3e-13
Glyma13g24380.1 69 5e-12
Glyma13g30950.2 57 3e-08
Glyma13g30950.1 57 3e-08
Glyma15g08410.1 55 1e-07
Glyma15g18740.1 53 4e-07
>Glyma07g32150.1
Length = 376
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 1 MAPISKXXXXXXXXXXXXXXQINARDSQFFSKVTHVXXXXXXXXXXXXXXXXXXXXXXXX 60
MAPISK Q+NARDSQFFSKVT +
Sbjct: 1 MAPISKLIPFLFLTTLLVSLQVNARDSQFFSKVTPLNNNIKETEVPKNEGQVNKPE---- 56
Query: 61 QQPVFTPETENSYGLYGHESGLH 83
QQPVFTPETENSYGLYGHE+GLH
Sbjct: 57 QQPVFTPETENSYGLYGHETGLH 79
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 158 GNQNELSNTKFTEGGNKYNPRXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXX 209
G QNELS+TK+TEGG YN
Sbjct: 238 GKQNELSDTKYTEGG--YNSMENQNNNKYYYNNDNTANGKYFYNNNDAANNRYYKTKAVN 295
Query: 210 XXXGAEVQGMSDTRFMEGGKYFYNVNSENEKYN-PTGYGGESSTRGVNSEXXXXXXXXXX 268
E QG+SDTRFMEGGKYFY+VNS EKYN PT YGG STRG+NSE
Sbjct: 296 NNYNDERQGLSDTRFMEGGKYFYDVNS--EKYNHPTQYGG--STRGMNSE---NWSNNRG 348
Query: 269 XXXXXXXXSMEGYKN 283
SMEGY+N
Sbjct: 349 YFGNNNVNSMEGYQN 363
>Glyma13g24380.1
Length = 372
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MAPISKXXXXXXXXXXXXXXQINARDSQFFSKVTHVXXXXXXXXXXXXXXXXXXXXXXXX 60
MAPISK Q+NARDSQFFSKVT +
Sbjct: 1 MAPISKLIPFLFLTTLLVSLQVNARDSQFFSKVTPLNNNIKETETPKNEGQVNKPE---- 56
Query: 61 QQPVFTPETENSYGLYGHESGLH 83
QQP F PETENSYGLYGHE+GLH
Sbjct: 57 QQPTFIPETENSYGLYGHETGLH 79
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 44/70 (62%), Gaps = 8/70 (11%)
Query: 215 EVQGMSDTRFMEGGKYFYNVNSENEKYN-PTGYGGESSTRGVNSEXXXXXXXXXXXXXXX 273
E QG+SDTRF+EGGKYFY+V S EKYN PT YGG STRGVNSE
Sbjct: 297 ERQGLSDTRFIEGGKYFYDVKS--EKYNHPTQYGG--STRGVNSE---NWSSNRGYFGNN 349
Query: 274 XXXSMEGYKN 283
SMEGY+N
Sbjct: 350 NVNSMEGYQN 359
>Glyma13g30950.2
Length = 272
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 1 MAPISKXXXXXXXXXXXXXXQINARDSQFFSKVTHVXXXXXXXXXXXXXXXXXXXXXXXX 60
MAP S QI+ARDSQFFSKVTH
Sbjct: 1 MAPSSNYISFLFLTTLLFALQISARDSQFFSKVTHFDKNSVKETELPNKEAPEVNKPE-- 58
Query: 61 QQPVFTPETENSYGLYGH 78
QQP F PETENSYGLYGH
Sbjct: 59 QQPPFIPETENSYGLYGH 76
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%), Gaps = 4/43 (9%)
Query: 215 EVQGMSDTRFMEGGKYFYNVNSENEKYNPTGYGGESSTRGVNS 257
E QGMSDTRF+EGGKYF++V + EKYNPT YG S+R VN+
Sbjct: 205 ERQGMSDTRFLEGGKYFHDVAA--EKYNPTNYGD--SSREVNT 243
>Glyma13g30950.1
Length = 272
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 1 MAPISKXXXXXXXXXXXXXXQINARDSQFFSKVTHVXXXXXXXXXXXXXXXXXXXXXXXX 60
MAP S QI+ARDSQFFSKVTH
Sbjct: 1 MAPSSNYISFLFLTTLLFALQISARDSQFFSKVTHFDKNSVKETELPNKEAPEVNKPE-- 58
Query: 61 QQPVFTPETENSYGLYGH 78
QQP F PETENSYGLYGH
Sbjct: 59 QQPPFIPETENSYGLYGH 76
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%), Gaps = 4/43 (9%)
Query: 215 EVQGMSDTRFMEGGKYFYNVNSENEKYNPTGYGGESSTRGVNS 257
E QGMSDTRF+EGGKYF++V + EKYNPT YG S+R VN+
Sbjct: 205 ERQGMSDTRFLEGGKYFHDVAA--EKYNPTNYGD--SSREVNT 243
>Glyma15g08410.1
Length = 228
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%), Gaps = 4/43 (9%)
Query: 215 EVQGMSDTRFMEGGKYFYNVNSENEKYNPTGYGGESSTRGVNS 257
E QGMSDTRF+EGGKYFY+V + EKYNPT YG S+R VN+
Sbjct: 161 ERQGMSDTRFLEGGKYFYDVGA--EKYNPTNYG--DSSREVNT 199
>Glyma15g18740.1
Length = 189
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 157 EGNQNELSNTKFTEGG----------NKYNPRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 206
EGNQ ELS+TK+TE G N YN
Sbjct: 80 EGNQYELSDTKYTEEGYNNKYHNSYQNNYNNDAANEKYSYNNNNNKNYNAHNNRYNTYNS 139
Query: 207 XXXXXXGAEVQGMSDTRFMEGGKYFYNVNSENEKYNPTGYGGESSTRGVNS 257
E QG+SDTRF+EGGKYFY+V E YNPT YG S+R VN+
Sbjct: 140 NAVSRYNGERQGISDTRFLEGGKYFYDVGM--EMYNPTNYG--DSSREVNT 186