Miyakogusa Predicted Gene

Lj4g3v0473370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0473370.1 Non Chatacterized Hit- tr|K4ATG2|K4ATG2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,53.49,3e-19,
,CUFF.47360.1
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g01200.1                                                       123   4e-29
Glyma05g38470.1                                                       121   2e-28
Glyma04g37700.1                                                       113   5e-26

>Glyma08g01200.1 
          Length = 469

 Score =  123 bits (309), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/85 (62%), Positives = 67/85 (78%)

Query: 1   MTTRHVVSQVMADYPQAPDSDMVFIPLGMYLKAVSIFDCLRARAGRKFFSKQGRKTDFES 60
           MT RH+VS  MADYPQAP S++V IPL M+LKA++ FDC+    G+ + SKQGR+ D+ES
Sbjct: 381 MTDRHLVSGAMADYPQAPHSNLVLIPLSMFLKALNFFDCVNVSTGKNYLSKQGRQIDYES 440

Query: 61  LAHGDLQEVRHMLAMVVFDTLYPLH 85
           LA GDL EVRH+ A +VFDT+YPLH
Sbjct: 441 LARGDLLEVRHVFARIVFDTVYPLH 465


>Glyma05g38470.1 
          Length = 458

 Score =  121 bits (303), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 66/85 (77%)

Query: 1   MTTRHVVSQVMADYPQAPDSDMVFIPLGMYLKAVSIFDCLRARAGRKFFSKQGRKTDFES 60
           M  RH VS  MADYPQAP SD+V IP+ MYL+A++ FDC+R  A + F SKQGR+ D+ES
Sbjct: 359 MKDRHFVSGAMADYPQAPHSDLVLIPIPMYLRALNFFDCVRVSASKNFLSKQGRQIDYES 418

Query: 61  LAHGDLQEVRHMLAMVVFDTLYPLH 85
           LA GDL EVRH+ A +VFDT+YPLH
Sbjct: 419 LARGDLLEVRHVFARIVFDTVYPLH 443


>Glyma04g37700.1 
          Length = 458

 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 66/84 (78%)

Query: 1   MTTRHVVSQVMADYPQAPDSDMVFIPLGMYLKAVSIFDCLRARAGRKFFSKQGRKTDFES 60
           MT  + VSQ MADYPQAP S++VFIP+ +Y+K  ++FDC+R    +KF SKQ RK D++S
Sbjct: 358 MTNEYFVSQAMADYPQAPRSNLVFIPITLYVKVYNMFDCVRRSTVKKFLSKQHRKIDYQS 417

Query: 61  LAHGDLQEVRHMLAMVVFDTLYPL 84
           LA G+LQEVRH+ A +VFDT+YPL
Sbjct: 418 LALGNLQEVRHVFARIVFDTVYPL 441