Miyakogusa Predicted Gene

Lj4g3v0462580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0462580.1 Non Chatacterized Hit- tr|I1IGN1|I1IGN1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,51.49,2e-19,seg,NULL,CUFF.47297.1
         (117 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g31820.1                                                        94   3e-20
Glyma13g24650.1                                                        91   3e-19
Glyma13g24650.2                                                        60   6e-10

>Glyma07g31820.1 
          Length = 107

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/97 (50%), Positives = 54/97 (55%)

Query: 9   SESNTGDVSSAQAVLLGALAPGVNGPTWIXXXXXXXXXXXXXXXXXXXXXXXXDSWLVLH 68
           +ES  GDVSSA AVLLGALAPGVNGPTWI                        DSWL+ H
Sbjct: 6   TESEAGDVSSATAVLLGALAPGVNGPTWITLKSTFLMLGLCLTVMLALAFSSSDSWLIFH 65

Query: 69  VGXXXXXXXXXXXXXSWFLAETGLVSIEHQMCEMGLQ 105
           V              SWFLA+TGLVS+EHQM EMGL+
Sbjct: 66  VAFLVLICLTLFLLLSWFLAQTGLVSVEHQMREMGLE 102


>Glyma13g24650.1 
          Length = 107

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 52/95 (54%)

Query: 11  SNTGDVSSAQAVLLGALAPGVNGPTWIXXXXXXXXXXXXXXXXXXXXXXXXDSWLVLHVG 70
           S+ GDVSSA AVLLGALAPGVNGPTWI                        DSWL+ HV 
Sbjct: 8   SDAGDVSSATAVLLGALAPGVNGPTWITLKSTFLLLGLCLAVMLALAFSSSDSWLIFHVA 67

Query: 71  XXXXXXXXXXXXXSWFLAETGLVSIEHQMCEMGLQ 105
                        SWFL +TGLVS+EHQM EMGL+
Sbjct: 68  FLVLICLILFLLLSWFLTQTGLVSVEHQMREMGLE 102


>Glyma13g24650.2 
          Length = 89

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 35/77 (45%)

Query: 11 SNTGDVSSAQAVLLGALAPGVNGPTWIXXXXXXXXXXXXXXXXXXXXXXXXDSWLVLHVG 70
          S+ GDVSSA AVLLGALAPGVNGPTWI                        DSWL+ HV 
Sbjct: 8  SDAGDVSSATAVLLGALAPGVNGPTWITLKSTFLLLGLCLAVMLALAFSSSDSWLIFHVA 67

Query: 71 XXXXXXXXXXXXXSWFL 87
                       SW+ 
Sbjct: 68 FLVLICLILFLLLSWYF 84