Miyakogusa Predicted Gene

Lj4g3v0451300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0451300.1 tr|A9TCJ5|A9TCJ5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_90989
,55,0.000000000000003,seg,NULL; no description,NULL; P-loop containing
nucleoside triphosphate hydrolases,NULL; MSS1/TRME-,CUFF.47271.1
         (167 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g31670.1                                                       165   2e-41
Glyma13g24780.1                                                       165   2e-41
Glyma06g08580.1                                                       104   5e-23
Glyma04g08470.1                                                       100   6e-22
Glyma15g30620.1                                                        99   3e-21
Glyma03g07760.1                                                        92   3e-19
Glyma09g15760.1                                                        74   1e-13
Glyma11g30700.1                                                        60   1e-09
Glyma13g12120.1                                                        49   3e-06

>Glyma07g31670.1 
          Length = 301

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 85/94 (90%)

Query: 73  LFIPPGIEPDEVTDSMILPASNIVVGPYAGDSRIKDVEFVKSSPRARDCPKDDRPEFAVL 132
           LFIPPGIEPDEV DS +LP SNI VGPYAGDS IKDV+FVKSS RARDCPKD+RPEFAVL
Sbjct: 68  LFIPPGIEPDEVNDSTVLPGSNIAVGPYAGDSHIKDVQFVKSSARARDCPKDNRPEFAVL 127

Query: 133 GRSNVGKSSLINSLVRKKELALTSKRPGNVETLN 166
           GRSNVGKSSLINSLVRKKE+ALTSK+PG  + +N
Sbjct: 128 GRSNVGKSSLINSLVRKKEIALTSKKPGKTQLIN 161


>Glyma13g24780.1 
          Length = 253

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/94 (84%), Positives = 85/94 (90%)

Query: 73  LFIPPGIEPDEVTDSMILPASNIVVGPYAGDSRIKDVEFVKSSPRARDCPKDDRPEFAVL 132
           LFIPPGIEPDEV DS +LP SNI VGPYAGDSRIKDV+FVKSS RARDCPKDD PEFAVL
Sbjct: 20  LFIPPGIEPDEVDDSTVLPGSNIAVGPYAGDSRIKDVQFVKSSARARDCPKDDLPEFAVL 79

Query: 133 GRSNVGKSSLINSLVRKKELALTSKRPGNVETLN 166
           GRSNVGKSSLINSLVRKKE+ALTSK+PG  + +N
Sbjct: 80  GRSNVGKSSLINSLVRKKEIALTSKKPGKTQLIN 113


>Glyma06g08580.1 
          Length = 293

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 68/94 (72%), Gaps = 1/94 (1%)

Query: 73  LFIPPGIEPDEVTDSMILPASNIVVGPYAGDSRIKDVEFVKSSPRARDCPKDDRPEFAVL 132
           LF+PP      +  S +L  SNI++  YA D+++   EFVKSS +  DCP D  PEFA++
Sbjct: 58  LFVPPETTV-SLESSRVLNGSNILLSNYANDAQVLQAEFVKSSVKTEDCPSDGIPEFALV 116

Query: 133 GRSNVGKSSLINSLVRKKELALTSKRPGNVETLN 166
           GRSNVGKSSL+NSLVR+K+LALTSK+PG  + +N
Sbjct: 117 GRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCIN 150


>Glyma04g08470.1 
          Length = 293

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 1/94 (1%)

Query: 73  LFIPPGIEPDEVTDSMILPASNIVVGPYAGDSRIKDVEFVKSSPRARDCPKDDRPEFAVL 132
           LF+PP      +  S +L  SNI++  YA D+ +   EFVKSS +  DCP D   EFA++
Sbjct: 58  LFVPPETTVS-LESSRVLNGSNILLSNYANDALVLQAEFVKSSVKTEDCPSDGLAEFALV 116

Query: 133 GRSNVGKSSLINSLVRKKELALTSKRPGNVETLN 166
           GRSNVGKSSL+NSLVR+K+LALTSK+PG  + +N
Sbjct: 117 GRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCIN 150


>Glyma15g30620.1 
          Length = 106

 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/61 (77%), Positives = 50/61 (81%)

Query: 73  LFIPPGIEPDEVTDSMILPASNIVVGPYAGDSRIKDVEFVKSSPRARDCPKDDRPEFAVL 132
           LFIPP IEPDEV DS I P SNIVV PYA +SRIKDV+FVKSS R RDCPKDD P+F VL
Sbjct: 33  LFIPPSIEPDEVDDSTIFPGSNIVVRPYADNSRIKDVQFVKSSARTRDCPKDDLPKFVVL 92

Query: 133 G 133
           G
Sbjct: 93  G 93


>Glyma03g07760.1 
          Length = 138

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/78 (60%), Positives = 52/78 (66%), Gaps = 5/78 (6%)

Query: 73  LFIPPGIEPDEVTDSMILPASNIVVGPYAGDSRIKDVEFVKSSPRARDCPKDDRPEFAVL 132
           L IP GIEPDE  DS  LP SNI VGPY GDSRIKDV+FVKSS RARDCPK     F   
Sbjct: 1   LLIPLGIEPDEFDDSTALPGSNITVGPYVGDSRIKDVQFVKSSTRARDCPKHWEEAFDFK 60

Query: 133 GRSNVGKSSLINSLVRKK 150
           GR +      ++S V+KK
Sbjct: 61  GRFD-----FVDSCVKKK 73


>Glyma09g15760.1 
          Length = 204

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 33/42 (78%), Positives = 38/42 (90%)

Query: 73  LFIPPGIEPDEVTDSMILPASNIVVGPYAGDSRIKDVEFVKS 114
           L IPPGIEPD+V DS +LP+SNIVVGPY GDS+IKDV+FVKS
Sbjct: 20  LLIPPGIEPDKVDDSTVLPSSNIVVGPYVGDSQIKDVQFVKS 61


>Glyma11g30700.1 
          Length = 66

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/49 (61%), Positives = 37/49 (75%)

Query: 111 FVKSSPRARDCPKDDRPEFAVLGRSNVGKSSLINSLVRKKELALTSKRP 159
           FVK+  +  D P D  PEFA++GRSNV KSSL+NSLVR K+L LT K+P
Sbjct: 17  FVKNIVKTEDYPSDGLPEFALVGRSNVRKSSLLNSLVRWKKLTLTLKKP 65


>Glyma13g12120.1 
          Length = 1073

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 24/35 (68%)

Query: 73  LFIPPGIEPDEVTDSMILPASNIVVGPYAGDSRIK 107
           L IPPGIE DEV DS I+P SNI VG YA    +K
Sbjct: 159 LLIPPGIELDEVGDSTIIPGSNIAVGSYASKGHVK 193