Miyakogusa Predicted Gene
- Lj4g3v0450850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0450850.1 Non Chatacterized Hit- tr|J3M2Q0|J3M2Q0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G3,67.86,6e-19,seg,NULL; Clathrin_lg_ch,Clathrin light chain;
coiled-coil,NULL; PROTEIN BINDING / PROTEIN TRANSPORT,CUFF.47233.1
(177 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g24990.1 178 2e-45
Glyma07g31450.1 173 7e-44
Glyma15g07810.1 161 4e-40
Glyma13g31500.1 160 5e-40
Glyma01g28550.1 133 1e-31
Glyma12g33060.1 130 1e-30
Glyma13g37410.1 127 8e-30
>Glyma13g24990.1
Length = 303
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 126/180 (70%), Gaps = 6/180 (3%)
Query: 2 SFAVDDLNFDA--ADDTXXXXXXXXXXPGDDAPVEHSTTAAPESPDIFGFSDPNPNYSQS 59
+F VDD +F A A DT P DD PV+++ TAA SP+IFGFSDP P YSQS
Sbjct: 7 AFTVDDDHFAAPAAADTFSGYPDFSSFPSDDVPVDYADTAA--SPEIFGFSDPGPVYSQS 64
Query: 60 PFEPEHVVENGDENG--YDDGVFVSDGPVLPPPGDMEPEEGYALREWRRQNAIQXXXXXX 117
PFE H NG+ Y DGVFVS+GPVLPPPG+MEPEEGY LREWRRQN IQ
Sbjct: 65 PFEQVHENGNGNGTENGYGDGVFVSNGPVLPPPGEMEPEEGYVLREWRRQNVIQLEEKEK 124
Query: 118 XXXXXXXXXXXXAEDYKVAFYEKRKLNVESNKVQNREREKLYLANQEKFHKEADKNYWKA 177
AE+YKVAFYEKRKLNVE+NKVQN+EREKLYLANQEKFHKEADKNYWKA
Sbjct: 125 REKEMRLKIIEEAEEYKVAFYEKRKLNVETNKVQNKEREKLYLANQEKFHKEADKNYWKA 184
>Glyma07g31450.1
Length = 310
Score = 173 bits (439), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 127/180 (70%), Gaps = 6/180 (3%)
Query: 2 SFAVDDLNFDA--ADDTXXXXXXXXXXPGDDAPVEHSTTAAPESPDIFGFSDPNPNYSQS 59
+F VDD +F A A DT P DD PV+H+ TAA SP+IFGFSDP+P YS S
Sbjct: 7 AFTVDDDHFAAPSAADTFSGYGDFSTFPSDDVPVDHAATAA--SPEIFGFSDPDPGYSPS 64
Query: 60 PFEPEH--VVENGDENGYDDGVFVSDGPVLPPPGDMEPEEGYALREWRRQNAIQXXXXXX 117
PFE H NG NGY DGVFVSDGPVLPPP ++EPEEG+ALREWRRQNAIQ
Sbjct: 65 PFEQVHENGNGNGTVNGYGDGVFVSDGPVLPPPEEVEPEEGHALREWRRQNAIQLEEKEK 124
Query: 118 XXXXXXXXXXXXAEDYKVAFYEKRKLNVESNKVQNREREKLYLANQEKFHKEADKNYWKA 177
AE+YKVAFYEKRKLNVE+NKVQNREREKLYLANQEKFHK ADKNYWKA
Sbjct: 125 REKEMRLKIIEEAEEYKVAFYEKRKLNVETNKVQNREREKLYLANQEKFHKVADKNYWKA 184
>Glyma15g07810.1
Length = 322
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 105/154 (68%), Gaps = 10/154 (6%)
Query: 30 DAPVEHSTTAAPESPDIFGFSDPNPNYSQSPFEPEHVVENGDENGYDDG-------VFVS 82
D V+HS A+PE I+GF+DPNP YSQSPFE V + VF+S
Sbjct: 46 DVAVDHSAAASPE---IYGFTDPNPAYSQSPFESATVENGNENGNGYGQGDGDGDGVFIS 102
Query: 83 DGPVLPPPGDMEPEEGYALREWRRQNAIQXXXXXXXXXXXXXXXXXXAEDYKVAFYEKRK 142
DGPVLPPP +MEPEEGYALREWRRQNAIQ AE+YKVAFYEKRK
Sbjct: 103 DGPVLPPPTEMEPEEGYALREWRRQNAIQLEEKEKREKEMRLKIIEEAEEYKVAFYEKRK 162
Query: 143 LNVESNKVQNREREKLYLANQEKFHKEADKNYWK 176
LNVE+NKVQNREREKL+LANQEKFHKEADK YWK
Sbjct: 163 LNVETNKVQNREREKLFLANQEKFHKEADKAYWK 196
>Glyma13g31500.1
Length = 313
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/148 (67%), Positives = 110/148 (74%), Gaps = 4/148 (2%)
Query: 30 DAPVEHSTTAAPESPDIFGFSDPNPNYSQSPFEPEHVV-ENGDENGYDDGVFVSDGPVLP 88
D V+HS A+PE I+GF+D NP YSQSPFE V ENG+ G DGVFVSDGPVLP
Sbjct: 46 DVAVDHSAAASPE---IYGFTDSNPAYSQSPFESATVENENGNGYGDGDGVFVSDGPVLP 102
Query: 89 PPGDMEPEEGYALREWRRQNAIQXXXXXXXXXXXXXXXXXXAEDYKVAFYEKRKLNVESN 148
PP +MEPEEGYALREWRRQNAIQ AE+YKVAFYEKRKLNVE+N
Sbjct: 103 PPTEMEPEEGYALREWRRQNAIQLEEKEKREKEMRLKIIEEAEEYKVAFYEKRKLNVETN 162
Query: 149 KVQNREREKLYLANQEKFHKEADKNYWK 176
KVQNREREKL++ANQEKFHKEADK YWK
Sbjct: 163 KVQNREREKLFVANQEKFHKEADKAYWK 190
>Glyma01g28550.1
Length = 260
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 50 SDPNPNYSQSPFEPEHVVENGDENGYDDGVFVSDGPVLPPPGDMEPEEGYALREWRRQNA 109
S P P YS + F PE +NG G D G SDGP+LPPP +M +EG+ALREWR QNA
Sbjct: 38 SSPPPIYSVAAFSPE---QNG--KGVDGGFGASDGPILPPPTNMVAKEGFALREWRMQNA 92
Query: 110 IQXXXXXXXXXXXXXXXXXXAEDYKVAFYEKRKLNVESNKVQNREREKLYLANQEKFHKE 169
IQ AE+YK+ FY KR++N E NK NREREKL+LA++EKFH E
Sbjct: 93 IQLEEKEKKEKEMRSQIIEEAEEYKIEFYRKREVNAEKNKASNREREKLFLASREKFHAE 152
Query: 170 ADKNYWK 176
ADKNYWK
Sbjct: 153 ADKNYWK 159
>Glyma12g33060.1
Length = 312
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 84/137 (61%), Gaps = 13/137 (9%)
Query: 43 SPDIFGF--SDPNPNYSQSPFEPEHVVENGDENGYDDGVFVSDGPVLPPPGDMEPEEGYA 100
SP ++GF S PNP++ SPFEP DD F SDGP+LP P M+ EEG+A
Sbjct: 62 SPSVYGFGVSTPNPDHV-SPFEPATA---------DDTTFTSDGPMLPDPSQMQ-EEGHA 110
Query: 101 LREWRRQNAIQXXXXXXXXXXXXXXXXXXAEDYKVAFYEKRKLNVESNKVQNREREKLYL 160
REWRR NAI AE+YK AFYEKRK+N E NK NREREK+YL
Sbjct: 111 RREWRRLNAIHLEEKEKREKEMRNQIIKEAEEYKEAFYEKRKVNCEKNKENNREREKIYL 170
Query: 161 ANQEKFHKEADKNYWKA 177
ANQEKFHKEA +YWKA
Sbjct: 171 ANQEKFHKEAHNHYWKA 187
>Glyma13g37410.1
Length = 300
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 83/137 (60%), Gaps = 13/137 (9%)
Query: 43 SPDIFGF--SDPNPNYSQSPFEPEHVVENGDENGYDDGVFVSDGPVLPPPGDMEPEEGYA 100
SP ++GF S PNP++ SPFEP DD F SDGP+LP P M+ EEG A
Sbjct: 36 SPPVYGFGISTPNPDFV-SPFEPA---------AADDTTFSSDGPMLPDPSQMQ-EEGRA 84
Query: 101 LREWRRQNAIQXXXXXXXXXXXXXXXXXXAEDYKVAFYEKRKLNVESNKVQNREREKLYL 160
REWRR NAI AE+YK AFYEKRK+N E NK NREREK++L
Sbjct: 85 RREWRRLNAIHLEEKETREKEMRNQIIKEAEEYKEAFYEKRKVNCEKNKENNREREKIHL 144
Query: 161 ANQEKFHKEADKNYWKA 177
ANQEKFHKEA +YWKA
Sbjct: 145 ANQEKFHKEAHNHYWKA 161