Miyakogusa Predicted Gene
- Lj4g3v0450460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0450460.1 Non Chatacterized Hit- tr|I3S222|I3S222_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,84.71,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF1218,Protein of unknown function DUF1218,CUFF.47219.1
(176 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g31330.2 280 4e-76
Glyma07g31330.1 280 4e-76
Glyma13g25130.1 235 1e-62
Glyma12g35030.1 192 1e-49
Glyma13g35510.1 191 4e-49
Glyma06g38220.1 183 9e-47
Glyma15g40530.1 158 2e-39
Glyma08g31000.1 152 2e-37
Glyma01g20230.1 137 5e-33
Glyma10g41700.1 129 2e-30
Glyma20g25510.1 125 2e-29
Glyma12g15330.1 94 8e-20
Glyma11g09860.1 61 7e-10
Glyma12g02170.1 56 2e-08
>Glyma07g31330.2
Length = 183
Score = 280 bits (717), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/164 (87%), Positives = 156/164 (95%)
Query: 1 MASSLVLAVVFLFDIIAFALAVVAEQRRNTASLLRNAEGREYCQYDSDIATGLGVGSLFI 60
MASSL+LAVVF+ D++AFALAV AEQRRNTASL +++ GR YCQYDSDIATGLGVGSLFI
Sbjct: 1 MASSLLLAVVFVLDLVAFALAVAAEQRRNTASLNKDSAGRNYCQYDSDIATGLGVGSLFI 60
Query: 61 LVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTK 120
LV+ QVIIMVVTRCLCCG+AMRPSGSRSW+ICLFIT+W+TFIIAASCLLAGSVRNAYHTK
Sbjct: 61 LVASQVIIMVVTRCLCCGRAMRPSGSRSWSICLFITSWVTFIIAASCLLAGSVRNAYHTK 120
Query: 121 YRDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKA 164
YRDLMG+ APSCQTLRKGVFGAGAAFIVLTGI SELYYVSFSKA
Sbjct: 121 YRDLMGERAPSCQTLRKGVFGAGAAFIVLTGITSELYYVSFSKA 164
>Glyma07g31330.1
Length = 183
Score = 280 bits (717), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/164 (87%), Positives = 156/164 (95%)
Query: 1 MASSLVLAVVFLFDIIAFALAVVAEQRRNTASLLRNAEGREYCQYDSDIATGLGVGSLFI 60
MASSL+LAVVF+ D++AFALAV AEQRRNTASL +++ GR YCQYDSDIATGLGVGSLFI
Sbjct: 1 MASSLLLAVVFVLDLVAFALAVAAEQRRNTASLNKDSAGRNYCQYDSDIATGLGVGSLFI 60
Query: 61 LVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTK 120
LV+ QVIIMVVTRCLCCG+AMRPSGSRSW+ICLFIT+W+TFIIAASCLLAGSVRNAYHTK
Sbjct: 61 LVASQVIIMVVTRCLCCGRAMRPSGSRSWSICLFITSWVTFIIAASCLLAGSVRNAYHTK 120
Query: 121 YRDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKA 164
YRDLMG+ APSCQTLRKGVFGAGAAFIVLTGI SELYYVSFSKA
Sbjct: 121 YRDLMGERAPSCQTLRKGVFGAGAAFIVLTGITSELYYVSFSKA 164
>Glyma13g25130.1
Length = 145
Score = 235 bits (600), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/132 (84%), Positives = 120/132 (90%)
Query: 33 LLRNAEGREYCQYDSDIATGLGVGSLFILVSCQVIIMVVTRCLCCGKAMRPSGSRSWAIC 92
L +++ GR YCQYDSDIAT LGVGS FILV+ QVIIMVVTRCLCCGKAMRPSGSRSWAIC
Sbjct: 1 LNKDSAGRNYCQYDSDIATNLGVGSFFILVASQVIIMVVTRCLCCGKAMRPSGSRSWAIC 60
Query: 93 LFITTWLTFIIAASCLLAGSVRNAYHTKYRDLMGDNAPSCQTLRKGVFGAGAAFIVLTGI 152
LFIT+W+TF IAASCLLAGSVRNAYHT YRDLMG+ APSCQTLRKGVFGAGAAFI+ GI
Sbjct: 61 LFITSWVTFFIAASCLLAGSVRNAYHTNYRDLMGERAPSCQTLRKGVFGAGAAFIIFKGI 120
Query: 153 ASELYYVSFSKA 164
S+LYYVSFSKA
Sbjct: 121 TSDLYYVSFSKA 132
>Glyma12g35030.1
Length = 185
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 128/174 (73%), Gaps = 1/174 (0%)
Query: 1 MASSLVLAVVFLFDIIAFALAVVAEQRRNTASLL-RNAEGREYCQYDSDIATGLGVGSLF 59
MAS L+L VF+FD+IAF LAV AEQRR+TAS++ N + YC Y+SDIATG GVG+
Sbjct: 1 MASKLLLITVFVFDLIAFGLAVAAEQRRSTASIVPDNEKNYNYCVYNSDIATGYGVGAFL 60
Query: 60 ILVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHT 119
L+ QV+IMV +RC CCGK + P GSR+ A+ LFI W+ FII+ CLLAGSV NAYHT
Sbjct: 61 FLLVSQVLIMVASRCFCCGKPLNPGGSRACAVVLFIICWVFFIISEVCLLAGSVENAYHT 120
Query: 120 KYRDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKAIMAPLPMLG 173
KYR + G+N PSC+T+RKGVF AGAAFI T I SE YY+++S+A + P G
Sbjct: 121 KYRTIFGENPPSCETVRKGVFAAGAAFIFFTAIVSEFYYINYSRARESFQPYAG 174
>Glyma13g35510.1
Length = 185
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 128/174 (73%), Gaps = 1/174 (0%)
Query: 1 MASSLVLAVVFLFDIIAFALAVVAEQRRNTASLL-RNAEGREYCQYDSDIATGLGVGSLF 59
MAS L+L VF+FD+IAF LAV AEQRR+TAS++ N + YC Y+SDIATG GVG+
Sbjct: 1 MASKLLLITVFVFDLIAFGLAVAAEQRRSTASVVTDNEKNYNYCVYNSDIATGYGVGAFL 60
Query: 60 ILVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHT 119
L+ QV+IMV +RC CCGK + P GSR+ A+ LFI W+ FIIA CLLAGSV NAYHT
Sbjct: 61 FLLVSQVLIMVASRCFCCGKPLNPGGSRACAVVLFIICWVFFIIAEVCLLAGSVENAYHT 120
Query: 120 KYRDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKAIMAPLPMLG 173
KYR + G+N PSC+T+RKGVF AGAAF+ T I SE YY+++S+A + P G
Sbjct: 121 KYRTIFGENPPSCETVRKGVFAAGAAFVFFTAIISEFYYINYSRARESFQPYAG 174
>Glyma06g38220.1
Length = 175
Score = 183 bits (464), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 112/164 (68%), Gaps = 5/164 (3%)
Query: 1 MASSLVLAVVFLFDIIAFALAVVAEQRRNTASLLRNAEGREYCQYDSDIATGLGVGSLFI 60
MAS +L VF+ D+IAFA AV AEQRR+T + YDSDI+TGLGVG+
Sbjct: 1 MASMFLLITVFVLDLIAFAFAVAAEQRRSTTRI-----STTIIVYDSDISTGLGVGAFLF 55
Query: 61 LVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTK 120
L++ Q +IMV +RC CCGK + P GSR+ + LFI W+ F IA CLLAGSVRNAYHTK
Sbjct: 56 LLASQDLIMVASRCFCCGKPLNPGGSRTLELVLFIICWVFFFIAEVCLLAGSVRNAYHTK 115
Query: 121 YRDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKA 164
YR + + SCQT+RKG+F AGA F++ GI SE YY+ FSKA
Sbjct: 116 YRTMFTEIPLSCQTVRKGIFAAGATFVLFNGIVSEFYYIRFSKA 159
>Glyma15g40530.1
Length = 143
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 91/124 (73%), Gaps = 26/124 (20%)
Query: 67 IIMVVTRCLCCGKAMRPSGSRSWAICLFI-------------------------TTWLTF 101
++MVVTRC+CCG+AMRPSGSRSW+ICLFI T +TF
Sbjct: 1 LVMVVTRCMCCGRAMRPSGSRSWSICLFISLAGVGVENVFDTATLQTRDMFVFDTLMVTF 60
Query: 102 IIAASCLLAGSVRNAYHTKYRD-LMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVS 160
IIAASCLLAGSVRN YHT+YRD +MG+ APSCQTLRKGVFGAGAAFIV TGI SEL YVS
Sbjct: 61 IIAASCLLAGSVRNMYHTEYRDPIMGERAPSCQTLRKGVFGAGAAFIVFTGITSELNYVS 120
Query: 161 FSKA 164
FSKA
Sbjct: 121 FSKA 124
>Glyma08g31000.1
Length = 191
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Query: 17 AFALAVVAEQRRNTASLLR-NAEGREYCQYDSDIATGLGVGSLFILVSCQVIIMVVTRCL 75
AF A+ AE+RR+ ++ + +C Y SD+ATG GVG+ L+S + ++M VT+C+
Sbjct: 21 AFGFAIAAERRRSVGTMHKIEGTNETFCSYSSDVATGYGVGAFLFLLSGESLLMGVTKCM 80
Query: 76 CCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTKYRDLMGDNAPSCQTL 135
C G+ + P +R+W+I F+++W+TF++A +CL+AG+ +NAYHTKYR ++ + SC+ L
Sbjct: 81 CFGRPLTPGVNRAWSIIYFLSSWVTFLVAEACLIAGATKNAYHTKYRGMIYAHNFSCEAL 140
Query: 136 RKGVFGAGAAFIVLTGIASELYYVSFSKAIMAPL 169
RKGVF AGA F+V T I + YY+ F+KA+ P+
Sbjct: 141 RKGVFIAGAVFVVATMILNVYYYMYFTKAMTTPV 174
>Glyma01g20230.1
Length = 191
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Query: 17 AFALAVVAEQRRNTASLLR-NAEGREYCQYDSDIATGLGVGSLFILVSCQVIIMVVTRCL 75
AF AV AE+RR+ ++ + +C Y SD+ATG GVG+ L+S + ++M VT+C+
Sbjct: 21 AFGFAVAAERRRSVGTMQKIEGTNETFCSYSSDVATGYGVGAFLFLLSGESLLMGVTKCM 80
Query: 76 CCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTKYRDLMGDNAPSCQTL 135
C G+ + P G+R+W+I F+++W+TF++A SCL+AG+ +NAYHTKYR ++ SC+ L
Sbjct: 81 CFGRPLTPGGNRAWSIIYFLSSWVTFLVAESCLIAGATKNAYHTKYRGMIYAQNFSCEAL 140
Query: 136 RKGVFGAGAAFIVLTGIASELYYVSFSKAIMAPL 169
RKGVF AGA F+V+T I + YY+ F+KA P+
Sbjct: 141 RKGVFVAGAVFVVVTMILNVYYYMYFTKATTTPV 174
>Glyma10g41700.1
Length = 195
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
Query: 3 SSLVLAVVFLFDIIAFALAVVAEQRRNTASLLRNA-EGREYCQYDSDIATGLGVGSLFIL 61
S +L ++ +IAF AV AE+RR+ A ++ + + + +C Y +D +T G+ ++ +L
Sbjct: 4 SVTILVLIIALHLIAFVFAVGAERRRSEAKVVPDEYDDQTFCHYTTDASTVYGLSAVALL 63
Query: 62 VSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTKY 121
+ ++ VTRCLCCGK + S + A+ FI +W++F+ A +CLLAGS RNAYHTKY
Sbjct: 64 LLSHTVLNGVTRCLCCGKGLVSGCSATSAVISFILSWISFLAAEACLLAGSARNAYHTKY 123
Query: 122 RDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKA 164
R ++ SC TLRKGVF AGAA +L+ + + LYY + SKA
Sbjct: 124 RGYFVNHDLSCATLRKGVFAAGAALTLLSMLTAILYYWAHSKA 166
>Glyma20g25510.1
Length = 196
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Query: 3 SSLVLAVVFLFDIIAFALAVVAEQRRNTASLLRNA-EGREYCQYDSDIATGLGVGSLFIL 61
S +L ++ +IAF A+ AE+RR+ A ++ + + R +C Y +D ++ G+ ++ +L
Sbjct: 4 SVTILVLIIALHLIAFVFAIGAERRRSEAKVVPDEYDDRTFCVYTTDASSVYGLAAVALL 63
Query: 62 VSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTKY 121
+ ++ VTRCLCCGK + S + A+ FI +W++F+ A +CLLAGS RNAYHTKY
Sbjct: 64 LLSHTVLNGVTRCLCCGKGLVSGCSATCAVFSFILSWISFLAAEACLLAGSARNAYHTKY 123
Query: 122 RDLMGDNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSKA 164
R + SC TLRKGVF AGAA +L+ + + LYY + SKA
Sbjct: 124 RGYFVKHDLSCATLRKGVFAAGAALTLLSMLTAILYYWAHSKA 166
>Glyma12g15330.1
Length = 113
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 63/94 (67%), Gaps = 7/94 (7%)
Query: 54 GVGSLFILVSCQVIIMVVTRCLCCGKAMRPSGSRSWAICLFITTWLTFIIAASCLLAGSV 113
GVG +F CQ+I + C R +S + +F T +TFIIAASCLLA SV
Sbjct: 4 GVGYVFY---CQIIYYLNI----CVFIWRWCHLKSVEMFVFHTFMVTFIIAASCLLADSV 56
Query: 114 RNAYHTKYRDLMGDNAPSCQTLRKGVFGAGAAFI 147
RNAYHTKY DLMG+ APSCQTLRKGVFGA AAFI
Sbjct: 57 RNAYHTKYHDLMGERAPSCQTLRKGVFGARAAFI 90
>Glyma11g09860.1
Length = 207
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 8 AVVFLFDIIAFALAVVAEQRRNTASLLRNAEGREYCQYDSDIATGLGVGSLFILVSCQVI 67
+VV +++ A + AE R S + + C Y A LG+ + LV Q+I
Sbjct: 10 SVVAFLGLLSAATSFGAEATRIKVSQVHFVTPNQ-CTYPRSPALPLGLIAAVALVLSQII 68
Query: 68 IMVVTRCLCCGKAMR-PSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTKYRDLMG 126
I V T C+CC K ++ P + A+ F+ +W TF+I LL G+ N + G
Sbjct: 69 INVGTGCVCCRKNLQIPDSNWKVALACFVLSWFTFVIGFLLLLTGAALNDQRGEESVYFG 128
Query: 127 DNAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSK---AIMAPLPMLGTL 175
C ++ GVF GA V + LYY+S ++ I P P G +
Sbjct: 129 YY--YCYVVKPGVFAGGAILSVASAAFGILYYISLTEKNNGIQYPYPNQGVI 178
>Glyma12g02170.1
Length = 207
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 9 VVFLFDIIAFALAVVAEQRRNTASLLRNAEGREYCQYDSDIATGLGVGSLFILVSCQVII 68
VV +++ A + AE R S + + C Y A LG+ + L+ Q+II
Sbjct: 11 VVAFLGLLSAATSFGAEATRIKVSQVHFVAPNQ-CTYPRSPALPLGLTAALALMLSQIII 69
Query: 69 MVVTRCLCCGKAMR-PSGSRSWAICLFITTWLTFIIAASCLLAGSVRNAYHTKYRDLMGD 127
V T C+CC K + P + A+ F+ +WLTF+I LL G+ N + G
Sbjct: 70 NVGTGCVCCRKNSQIPDSNWKVALVCFVLSWLTFVIGFLLLLTGAALNDQRGEESVYFGY 129
Query: 128 NAPSCQTLRKGVFGAGAAFIVLTGIASELYYVSFSK---AIMAPLPMLGTL 175
C ++ GVF GA + + LYY+S ++ P P G +
Sbjct: 130 Y--YCYVVKPGVFTGGAILSLASAAFGILYYISLTERKNGSQYPYPNQGVI 178