Miyakogusa Predicted Gene

Lj4g3v0450050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0450050.1 Non Chatacterized Hit- tr|I3S1K1|I3S1K1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.34,0,N-terminal domain of the delta subunit of the F1F0-ATP
synthase,F1F0 ATP synthase OSCP/delta subunit,CUFF.47323.1
         (241 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g42940.1                                                       341   4e-94
Glyma08g16470.1                                                       333   1e-91
Glyma15g42940.2                                                       228   4e-60
Glyma17g13930.1                                                        57   2e-08
Glyma05g03340.1                                                        55   6e-08

>Glyma15g42940.1 
          Length = 245

 Score =  341 bits (875), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 174/245 (71%), Positives = 201/245 (82%), Gaps = 7/245 (2%)

Query: 3   ALCNRVRSGIALSNKLGFLTSHRSS---TLVAP---LASRNYSTHVPGQKDTKIKVPLAM 56
           ALCNRVRSGI+L  K  FLTS RS+   +LVAP   LASRNY+ +VPGQK+TK+KVPLA+
Sbjct: 2   ALCNRVRSGISLFTKSTFLTSQRSTLQRSLVAPFISLASRNYA-NVPGQKETKVKVPLAL 60

Query: 57  FGGSGNYASALYIXXXXXXXXXXXDSELHQFVEAVKNSSLVSQFVKDISVAKDVRVKAIE 116
           FGGSGNYASALYI           ++EL QFVEAVKNS + SQF++D+SVAKDVRVK I+
Sbjct: 61  FGGSGNYASALYIASVKANAVEKVETELLQFVEAVKNSPIFSQFIRDLSVAKDVRVKVIQ 120

Query: 117 EISREAKFAEVTKNFLVVVAENGRLKNIDTIAKRFGELAMAYKGEVKATVTTVFXXXXXX 176
           +I  EAKF++VTKNFLV+VAENGRLKNIDTIAKRF +L+MAYKGEV+ATVTTV       
Sbjct: 121 DICGEAKFSDVTKNFLVIVAENGRLKNIDTIAKRFAQLSMAYKGEVQATVTTVVPLPPEE 180

Query: 177 XXXXXXTVQEIIGSGAKVSLEQKIDPSILGGLVLEFSQKVFDMSIRTRAQQMERILREPI 236
                 T+QEIIGSGAKV LEQKIDPSILGGLVLEFSQKVFDMSI+TRAQQMERILREP+
Sbjct: 181 EKALKETLQEIIGSGAKVHLEQKIDPSILGGLVLEFSQKVFDMSIKTRAQQMERILREPV 240

Query: 237 NISNI 241
           +I+NI
Sbjct: 241 SIANI 245


>Glyma08g16470.1 
          Length = 245

 Score =  333 bits (853), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 172/245 (70%), Positives = 197/245 (80%), Gaps = 7/245 (2%)

Query: 3   ALCNRVRSGIALSNKLGFLTSHRSST---LVAP---LASRNYSTHVPGQKDTKIKVPLAM 56
           AL NRVRSGI+L  K  FLTS RS+    LVAP    ASRNY+ +VPGQK+ K+KVPLA+
Sbjct: 2   ALSNRVRSGISLFTKSTFLTSERSTLQRFLVAPSISFASRNYA-NVPGQKENKVKVPLAL 60

Query: 57  FGGSGNYASALYIXXXXXXXXXXXDSELHQFVEAVKNSSLVSQFVKDISVAKDVRVKAIE 116
           FGGSGNYASALYI           +SEL QFVEAVKNS + SQF++D+SVAKDVRVK I+
Sbjct: 61  FGGSGNYASALYIASVKANAVAKVESELLQFVEAVKNSPIFSQFIRDLSVAKDVRVKVIQ 120

Query: 117 EISREAKFAEVTKNFLVVVAENGRLKNIDTIAKRFGELAMAYKGEVKATVTTVFXXXXXX 176
           +I  EAKF++VTKNFLV+VAENGRLKNIDTIAKRF +L+MAYKGEV+ATVTTV       
Sbjct: 121 DICGEAKFSDVTKNFLVIVAENGRLKNIDTIAKRFAQLSMAYKGEVQATVTTVVPLPPEE 180

Query: 177 XXXXXXTVQEIIGSGAKVSLEQKIDPSILGGLVLEFSQKVFDMSIRTRAQQMERILREPI 236
                 T+QEIIGSGAKV LEQKIDPSILGGLVLEFSQKVFDMSI+TRAQQMERILREP+
Sbjct: 181 EKALKETLQEIIGSGAKVHLEQKIDPSILGGLVLEFSQKVFDMSIKTRAQQMERILREPV 240

Query: 237 NISNI 241
           +I+NI
Sbjct: 241 SIANI 245


>Glyma15g42940.2 
          Length = 183

 Score =  228 bits (582), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 116/168 (69%), Positives = 138/168 (82%), Gaps = 7/168 (4%)

Query: 3   ALCNRVRSGIALSNKLGFLTSHRSS---TLVAP---LASRNYSTHVPGQKDTKIKVPLAM 56
           ALCNRVRSGI+L  K  FLTS RS+   +LVAP   LASRNY+ +VPGQK+TK+KVPLA+
Sbjct: 2   ALCNRVRSGISLFTKSTFLTSQRSTLQRSLVAPFISLASRNYA-NVPGQKETKVKVPLAL 60

Query: 57  FGGSGNYASALYIXXXXXXXXXXXDSELHQFVEAVKNSSLVSQFVKDISVAKDVRVKAIE 116
           FGGSGNYASALYI           ++EL QFVEAVKNS + SQF++D+SVAKDVRVK I+
Sbjct: 61  FGGSGNYASALYIASVKANAVEKVETELLQFVEAVKNSPIFSQFIRDLSVAKDVRVKVIQ 120

Query: 117 EISREAKFAEVTKNFLVVVAENGRLKNIDTIAKRFGELAMAYKGEVKA 164
           +I  EAKF++VTKNFLV+VAENGRLKNIDTIAKRF +L+MAYKGEV+A
Sbjct: 121 DICGEAKFSDVTKNFLVIVAENGRLKNIDTIAKRFAQLSMAYKGEVQA 168


>Glyma17g13930.1 
          Length = 253

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 7/137 (5%)

Query: 97  VSQFVKDISVAKDVRVKAIEEISREAKFAEVTKNFLVVVAENGRLKNIDTIAKRFGELAM 156
           VS +  D ++A + + + I+EI+  ++F   T+NFL ++ +  R+  I+ IAK F EL  
Sbjct: 109 VSDYFADPTLAVEKKRQLIDEIAESSEFQPHTRNFLYILVDAQRIDLINEIAKEF-ELVY 167

Query: 157 AYKGEVK-ATVTTVFXXXXXXXXXXXXTVQEIIGSGAKVSLEQKIDPSILGGLVLEFS-Q 214
               E + A VT+V              VQ++ G+   V ++  +DPS++ G  + +S  
Sbjct: 168 NSLTETELAVVTSVVKLESQHLAQIAKQVQKLTGT-KNVRIKTLLDPSLVAGFTVRYSGS 226

Query: 215 KVFDMSIRTRAQQMERI 231
           K+ DMS+R   +Q+E I
Sbjct: 227 KLIDMSVR---KQLEDI 240


>Glyma05g03340.1 
          Length = 248

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 5/145 (3%)

Query: 88  VEAVKNSSLVSQFVKDISVAKDVRVKAIEEISREAKFAEVTKNFLVVVAENGRLKNIDTI 147
           ++ + + + VS +  + ++A + + K I+EI+  + F   T+NFL ++ +  R+  I+ I
Sbjct: 95  IDEIFSEAQVSDYFANPTLAVEKKRKLIDEIAESSGFQPHTRNFLYILVDAQRIDLINEI 154

Query: 148 AKRFGELAMAYKGEVKATVTTVFXXXXXXXXXXXXTVQEIIGSGAKVSLEQKIDPSILGG 207
           AK F  +  +      A VT+V              VQ++ G+   V ++  +DPS++ G
Sbjct: 155 AKEFELVYNSLTDTELAVVTSVVKLESQHLAQIAKQVQKLTGT-KNVRIKTLLDPSLVAG 213

Query: 208 LVLEFS-QKVFDMSIRTRAQQMERI 231
             + +S  K+ DMS+R   +Q+E I
Sbjct: 214 FTVRYSGSKLIDMSVR---KQLEDI 235