Miyakogusa Predicted Gene

Lj4g3v0446740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0446740.1 tr|G7JRS3|G7JRS3_MEDTR Vacuolar protein
sorting-associated protein-like protein OS=Medicago
truncatu,91.18,0,VACUOLAR PROTEIN SORTING 28, ISOFORM 2
(VPS28),Vacuolar protein sorting-associated, VPS28;
Endosomal,CUFF.47179.1
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g06280.1                                                       320   5e-88
Glyma07g31030.1                                                       316   6e-87

>Glyma08g06280.1 
          Length = 212

 Score =  320 bits (820), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 152/173 (87%), Positives = 158/173 (91%)

Query: 3   TTMEVKLWNDKREREMYDNFAELYAIIKATERLEKAYVRDIISPQEYELECQKLIAHFKT 62
           TTME+KLWNDKREREMYDNF ELYAIIKATERLEKAYVRDIISPQEYELECQKLIAHFKT
Sbjct: 2   TTMEIKLWNDKREREMYDNFGELYAIIKATERLEKAYVRDIISPQEYELECQKLIAHFKT 61

Query: 63  LSSTLRDTVPSIDRFADTYRMECPAAINRLVVSGVPATVEHRXXXXXXXXXXXXXVAECV 122
           L+STL+DTVPSI+RFADTY+MECPAAINRLVVSGVPATVEHR             VAECV
Sbjct: 62  LASTLKDTVPSIERFADTYKMECPAAINRLVVSGVPATVEHRATAAASASTSAATVAECV 121

Query: 123 QNFITSMDSLKLNMIAVDQVHPLLSDLYASLNKLTILPPDFEGKTKRKEWIAR 175
           QNFITSMDSLKLNM+AVDQVHPLLSDLYASLNKLTILPPDFEGKTK KEWIAR
Sbjct: 122 QNFITSMDSLKLNMVAVDQVHPLLSDLYASLNKLTILPPDFEGKTKMKEWIAR 174


>Glyma07g31030.1 
          Length = 212

 Score =  316 bits (810), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 153/173 (88%), Positives = 158/173 (91%)

Query: 3   TTMEVKLWNDKREREMYDNFAELYAIIKATERLEKAYVRDIISPQEYELECQKLIAHFKT 62
           TTMEVKLWNDKREREMYDNF ELYAIIKATERLEKAYVRDIISPQEYELECQKLIAHFKT
Sbjct: 2   TTMEVKLWNDKREREMYDNFGELYAIIKATERLEKAYVRDIISPQEYELECQKLIAHFKT 61

Query: 63  LSSTLRDTVPSIDRFADTYRMECPAAINRLVVSGVPATVEHRXXXXXXXXXXXXXVAECV 122
           L+STL+DTVPSI+RFADTY+MECPAAINRLVVSGVPATVEHR             VAECV
Sbjct: 62  LASTLKDTVPSIERFADTYKMECPAAINRLVVSGVPATVEHRATVAASASTSAAIVAECV 121

Query: 123 QNFITSMDSLKLNMIAVDQVHPLLSDLYASLNKLTILPPDFEGKTKRKEWIAR 175
           QNFITSMDSLKLNM+AVDQVHPLLSDLYASLNKLTILPPDFEGKTK KEWIAR
Sbjct: 122 QNFITSMDSLKLNMVAVDQVHPLLSDLYASLNKLTILPPDFEGKTKMKEWIAR 174