Miyakogusa Predicted Gene

Lj4g3v0445610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0445610.1 tr|E3SER8|E3SER8_ELAGV F-box protein OS=Elaeis
guineensis var. tenera GN=FB1 PE=2 SV=1,43.06,5e-18,FBOX,F-box domain,
cyclin-like,CUFF.47162.1
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g30950.1                                                       210   5e-55
Glyma08g06340.1                                                       178   2e-45
Glyma13g32000.1                                                       156   8e-39
Glyma15g07320.1                                                       139   1e-33
Glyma07g28580.1                                                       131   3e-31
Glyma16g01170.1                                                        91   4e-19
Glyma16g23250.1                                                        67   5e-12
Glyma20g25240.1                                                        65   3e-11
Glyma02g05140.1                                                        54   5e-08

>Glyma07g30950.1 
          Length = 155

 Score =  210 bits (535), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 108/156 (69%), Positives = 122/156 (78%), Gaps = 7/156 (4%)

Query: 1   MALGFEGYSFARTLSMGRKRVVVTNN----VENDSVMTPLKRVCSGRINFNSERSRLEAL 56
           M LGFEGYS+  TL  GRKRVV+ +N    + ++S + PLKR+CSG+  F+SERSRLEAL
Sbjct: 1   MTLGFEGYSYTTTL--GRKRVVLLHNEASSLNSNSAVNPLKRMCSGKFTFDSERSRLEAL 58

Query: 57  PLDVLIRVLCGVDHEDLEQLLHVSKTIREATEIARDFHFEYSTPKKKTFGFRSPFDIEDA 116
           PLDVLIRVLCGVDHEDLEQL+ VSKT+REA EIAR  HFEYSTPKKKTF    PFDIE A
Sbjct: 59  PLDVLIRVLCGVDHEDLEQLVRVSKTVREAAEIARRMHFEYSTPKKKTFALPKPFDIEGA 118

Query: 117 NEFEEIEAPKAPLRKSVKSRLSGKNLGGISVALFGS 152
             FEEI+ P APLRK  KS+L GKNL  ISVALF S
Sbjct: 119 GGFEEIDTPNAPLRKP-KSKLIGKNLASISVALFAS 153


>Glyma08g06340.1 
          Length = 155

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/156 (62%), Positives = 115/156 (73%), Gaps = 7/156 (4%)

Query: 1   MALGFEGYSFARTLSMGRKRVVV----TNNVENDSVMTPLKRVCSGRINFNSERSRLEAL 56
           MALGFEGYS+  TL  GRKRVV+     +++ ++S +  LKR+CS +  F+SERSRLEAL
Sbjct: 1   MALGFEGYSYTTTL--GRKRVVLLHSEASSLNSNSPVNSLKRMCSKKFTFDSERSRLEAL 58

Query: 57  PLDVLIRVLCGVDHEDLEQLLHVSKTIREATEIARDFHFEYSTPKKKTFGFRSPFDIEDA 116
           PLDVLIRVLCGVDHEDL+QL+ VSKT+REA E+AR  HFEYSTPKKK F    PFDIE A
Sbjct: 59  PLDVLIRVLCGVDHEDLKQLVRVSKTVREAAEVARRMHFEYSTPKKKNFAIPKPFDIEGA 118

Query: 117 NEFEEIEAPKAPLRKSVKSRLSGKNLGGISVALFGS 152
             FEEI+       K  KS+L GKNL  ISVALF S
Sbjct: 119 GGFEEIDT-PKAPSKKAKSKLIGKNLASISVALFAS 153


>Glyma13g32000.1 
          Length = 144

 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 86/142 (60%), Positives = 110/142 (77%), Gaps = 6/142 (4%)

Query: 1   MALGFEGYSFARTLSMGRKRVVVTNNVENDSVMTPLKRVCSGRINFNSERSRLEALPLDV 60
           M +GF+G ++  TL++GRKRVVV+++V    V   LKR+   R++ NS+RS L+ALP DV
Sbjct: 1   MTVGFDGLTY--TLTLGRKRVVVSDDV---KVSPRLKRIYRDRVSLNSKRSLLDALPQDV 55

Query: 61  LIRVLCGVDHEDLEQLLHVSKTIREATEIARDFHFEYSTPKKKTFGFRSPFDIEDANEFE 120
           L++VLCGVDHEDL+QL HVSKTIREAT + +  HF+ STPKKKTFGF +PFD+ED N FE
Sbjct: 56  LVQVLCGVDHEDLKQLFHVSKTIREATTVVKKLHFDISTPKKKTFGFLNPFDLEDVNGFE 115

Query: 121 EIEAPKAPLRKSVKSRLSGKNL 142
           EIEAP   LRK+ KSRL+ K L
Sbjct: 116 EIEAPNRVLRKA-KSRLNRKKL 136


>Glyma15g07320.1 
          Length = 132

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 11/136 (8%)

Query: 18  RKRVVVTNNVENDSVMTPLKRVCSGRINFNSERSRLEALPLDVLIRVLCGVDHEDLEQLL 77
           RKR+VV N+VE   V   +KR+C+GRI+ NSE S LE LP D+L+RV CGVDHEDL+QL 
Sbjct: 1   RKRIVVFNDVE---VSPQVKRMCNGRISLNSESSLLETLPRDILVRVSCGVDHEDLKQLF 57

Query: 78  HVSKTIREATEIARDFHFEYSTPKKKTFGFRSPFDIEDANEFEEIEAPKAPLRK-SVKSR 136
           +VS+TIRE        HF+ STPKKKTF F +PFD ED N F++ EAP  PL K   KSR
Sbjct: 58  NVSRTIREK------LHFDVSTPKKKTFVFLNPFDFEDTNGFKKNEAPNVPLTKEKSKSR 111

Query: 137 LSGKNL-GGISVALFG 151
           L+GK L   IS  LF 
Sbjct: 112 LNGKKLDANISQVLFA 127


>Glyma07g28580.1 
          Length = 123

 Score =  131 bits (330), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/153 (51%), Positives = 88/153 (57%), Gaps = 31/153 (20%)

Query: 1   MALGFEGYSFARTLSMGRKRVVVTNNVENDSVMTPLKRVCSGRINFNSERSRLEALPLDV 60
           MALGFEGYS+  TL  GRKR                +R+ S +  F+S+RSRLEA P+DV
Sbjct: 1   MALGFEGYSYTTTL--GRKR----------------RRMSSEKFTFDSKRSRLEAFPVDV 42

Query: 61  LIRVLCGVDHEDLEQLLHVSKTIREATEIARDFHFEYSTPKKKTFGFRSPFDIEDANEFE 120
           LIRVL GV HEDLEQL            +AR  HFEYSTPK  T      FDIE A   E
Sbjct: 43  LIRVLYGVGHEDLEQL------------VARRMHFEYSTPKNITLAIPKSFDIEGATRLE 90

Query: 121 EIEAPKAPLRKSVKSRLSGKNLGGISVALFGST 153
           EI  PKAP RK  K +  GKNL  I VALF ST
Sbjct: 91  EINTPKAPFRKP-KLKPIGKNLASIPVALFAST 122


>Glyma16g01170.1 
          Length = 88

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 1/81 (1%)

Query: 62  IRVLCGVDHEDLEQLLHVSKTIREATEIARDFHFEYSTPKKKTFGFRSPFDIEDANEFEE 121
           ++VLCGV+HEDL++L HVSKTIREAT + ++ HF+  TPKKK   F + FD+E A  F+E
Sbjct: 1   VQVLCGVNHEDLKELFHVSKTIREATMMTKELHFDIKTPKKKKIAFLNTFDLEGAKGFKE 60

Query: 122 IEAPKAPLRKSVKSRLSGKNL 142
            +A   PL+K+ KSRL  K L
Sbjct: 61  KQALNGPLKKT-KSRLHRKKL 80


>Glyma16g23250.1 
          Length = 284

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 45/62 (72%)

Query: 41  SGRINFNSERSRLEALPLDVLIRVLCGVDHEDLEQLLHVSKTIREATEIARDFHFEYSTP 100
           + R++ +   S+LE+LP+D+L+++LC + H+ L  + HVS+ IR+A  IAR FHF Y+TP
Sbjct: 116 TPRLDDSLSESKLESLPMDLLVKILCHLHHDQLRAVFHVSQKIRKAVIIARQFHFNYTTP 175

Query: 101 KK 102
            +
Sbjct: 176 DR 177


>Glyma20g25240.1 
          Length = 787

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 73  LEQLLHVSKTIREATEIARDFHFEYSTPKKKTFGFRSPFDIEDANEFEEIEAPKAPLRKS 132
           +  +L +   I E  E+AR   FEY TPKKK +    PFDIE A  FEEI+ PKAPLRK 
Sbjct: 675 INPVLFLVVLIFEQAEVARRMLFEYCTPKKKIYAIPKPFDIEGAGGFEEIDTPKAPLRKP 734

Query: 133 VKSRL 137
            KS+L
Sbjct: 735 -KSKL 738


>Glyma02g05140.1 
          Length = 189

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 18/110 (16%)

Query: 57  PLDVLIRVLCGVDHEDLEQLLHVSKTIREATEIARDFHFEYSTP---KKKTFGFRSPFDI 113
           P+D+L+++LC + H+ L  + HVS+ IR+A  +AR FHF  +TP   +++     +P   
Sbjct: 37  PMDLLVKILCHLHHDQLRAVFHVSQRIRKAVIMARQFHFNNTTPDRSRQEMLSTTTPCPT 96

Query: 114 EDAN----------EFEEIEAPKAP---LRKSVKSRLSGKNLGGISVALF 150
           E                    PKAP   LR S  SRL    +  ++  LF
Sbjct: 97  EHWPFLCKGDGKGIRIPSPHTPKAPRHGLRPS--SRLKISEMQQVTAVLF 144