Miyakogusa Predicted Gene

Lj4g3v0423110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0423110.1 tr|A9T954|A9T954_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_168735,53.21,2e-17,seg,NULL,CUFF.47119.1
         (633 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g06610.1                                                       852   0.0  
Glyma07g30670.1                                                       830   0.0  
Glyma08g06610.2                                                       795   0.0  
Glyma08g06610.3                                                       580   e-165

>Glyma08g06610.1 
          Length = 621

 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/637 (71%), Positives = 500/637 (78%), Gaps = 20/637 (3%)

Query: 1   MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDRSGFDRPSSWGAPMGRPDHWS 60
           MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDR+GFDRPS+WG PMGR DHWS
Sbjct: 1   MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDRAGFDRPSAWGTPMGRSDHWS 60

Query: 61  RPHTSPATRHYDDKTPFLSHTAPIGRNFDEDERKPLDGGSAPRRTVSDESTRA-PPPSRV 119
           RPHTSPATRHYDDKTPFLSHTAPIGRNFDEDERKPLDGGS PRRT+SDES R  PPP   
Sbjct: 61  RPHTSPATRHYDDKTPFLSHTAPIGRNFDEDERKPLDGGSMPRRTISDESIRGGPPPRVE 120

Query: 120 EVKPEYGLGGSSLGRQVAPVSPAAVGTVNSYSARLTEAVHTGMNTHSLGGSKERXXXXXX 179
              PE+GLGGSSLGRQVAPVS   VG  NSYS RLT+AVH GMN  SLGGSKE+      
Sbjct: 121 VRPPEFGLGGSSLGRQVAPVSQTPVGAGNSYSGRLTDAVHVGMNPPSLGGSKEQGTAAGG 180

Query: 180 XXXXXXXYPNVWSMRKEVANAVEAEQSARSGANAVSKLAHASALEKVSSGRWQSKAAHYQ 239
                  YPN WSMRKEVA+AVE EQ A S A A SKLAHASALEKVSSGRWQSKA +YQ
Sbjct: 181 GG-----YPNAWSMRKEVASAVEPEQPAWSSAGAASKLAHASALEKVSSGRWQSKAVNYQ 235

Query: 240 NDAELVRSPEAESRQXXXXXXXXXXXXMDAVGEKEYYDAMLARQAERGLGIDNQMQGGRN 299
            DAE+VRSPE E+R              +AVGEKEYYDAMLAR AERGLGIDN MQGGRN
Sbjct: 236 TDAEVVRSPEVENRPHVNVNGVGAYNRTEAVGEKEYYDAMLARHAERGLGIDNPMQGGRN 295

Query: 300 ELLDYEKSGVSKYPEVRPRSVPYQSDGVQPARNVGKLVGSELKNPVPSEPTEXXXXXXXX 359
           EL +YE+SGVS+Y +VRP S P+ S GVQ ARN GK+VGS+L++P+PSE TE        
Sbjct: 296 ELPNYERSGVSRYSDVRPTSAPHHSGGVQLARNDGKIVGSDLQHPMPSELTERPKLKLLP 355

Query: 360 XXXXXESSEPSVTEYPQGYRLGNDSSHVETAHQAHGHANFVKPVSAGTESGKELGQRPKL 419
                ESSEP+V +Y QG R  NDS HVET +QAHGHANFVKPVSAG ++GK+ GQRPKL
Sbjct: 356 RAKPVESSEPAVMDYAQGNRQVNDSGHVETVYQAHGHANFVKPVSAGNDNGKDAGQRPKL 415

Query: 420 NLKPRSQPLEKLEVNTETGRNALFGGGRPRELVLKERGVDDVAINTYDVVENSNRVEPNI 479
           NLKPRSQP EKL+ N+E  RN LFGG RPRELVLKERG+DDV+IN   VVE+SNRVE NI
Sbjct: 416 NLKPRSQPTEKLDGNSERDRNVLFGGARPRELVLKERGIDDVSIN---VVEHSNRVENNI 472

Query: 480 LKAEKLPDPSIQSRHGEKANDAPLDQRTGRKPERKEQRVDGERGHSQKRNWRGGDNRRNA 539
           L+ +K PD S Q+R+GEK  DA LDQ+TGRKPERKEQR DG+R H+Q+RNWR GD RRN 
Sbjct: 473 LRVQKHPDHSTQTRYGEKTEDAHLDQKTGRKPERKEQRADGDRAHAQRRNWR-GDTRRNG 531

Query: 540 RETERQQPAPERPASPETWRKPVEQP-KPSQGVGGPRNGRAASAVELAQAFSRSVSDPKV 598
           +ET+RQ        SPETWRKPVEQ  K + G    R  RAASAVELAQAFSRSVSDPKV
Sbjct: 532 KETDRQ-------PSPETWRKPVEQQLKSAPGAASTRYSRAASAVELAQAFSRSVSDPKV 584

Query: 599 NDRFSGQNGLNTGRTQ--QMPFSRLVGPTPRPQINGY 633
           NDRFSGQ GLNTG +   Q+PFSRLVGPT RPQINGY
Sbjct: 585 NDRFSGQRGLNTGNSSRTQVPFSRLVGPTSRPQINGY 621


>Glyma07g30670.1 
          Length = 605

 Score =  830 bits (2145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/636 (72%), Positives = 501/636 (78%), Gaps = 34/636 (5%)

Query: 1   MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDRSGFDRPSSWGAPMGRPDHWS 60
           MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDRSGFDRPS+WG PMGR DHWS
Sbjct: 1   MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDRSGFDRPSAWGMPMGRSDHWS 60

Query: 61  RPHTSPATRHYDDKTPFLSHTAPIGRNFDEDERKPLDGGSAPRRTVSDESTRA-PPPSRV 119
           RPHTSPATRHYDDKTPFLS+TAPIGRNFDEDERKPLDGGS PRRT+SDES R  PPP   
Sbjct: 61  RPHTSPATRHYDDKTPFLSNTAPIGRNFDEDERKPLDGGSVPRRTISDESIRGGPPPRVE 120

Query: 120 EVKPEYGLGGSSLGRQVAPVSPAAVGTVNSYSARLTEAVHTGMNTHSLGGSKERXXXXXX 179
              PEYGLGGSSLGRQVAPVS   VG  NSYSARLTEA      T   GG          
Sbjct: 121 VRPPEYGLGGSSLGRQVAPVSQTPVGAGNSYSARLTEA-----GTAGDGGG--------- 166

Query: 180 XXXXXXXYPNVWSMRKEVANAVEAEQSARSGANAVSKLAHASALEKVSSGRWQSKAAHYQ 239
                  YPNVWSMRKEVA+AVE EQ A S A+A SKLAHASALEKVSSGRWQSKA HYQ
Sbjct: 167 -------YPNVWSMRKEVASAVEPEQPAWSSASAASKLAHASALEKVSSGRWQSKAVHYQ 219

Query: 240 NDAELVRSPEAESRQXXXXXXXXXXXXMDAVGEKEYYDAMLARQAERGLGIDNQMQGGRN 299
            DAE+VRSPE E+R             MDAVGEKEYYDAMLAR  ERGLGIDNQMQGGRN
Sbjct: 220 TDAEVVRSPELENR--PRVNGVGAYSRMDAVGEKEYYDAMLARHTERGLGIDNQMQGGRN 277

Query: 300 ELLDYEKSGVSKYPEVRPRSVPYQSDGVQPARNVGKLVGSELKNPVPSEPTEXXXXXXXX 359
           ELL+YE+S VS+Y +VRP S P+ S GVQ ARN GK+VGS+L++ +PSEPTE        
Sbjct: 278 ELLNYERSRVSRYSDVRPTSAPHHSGGVQLARNDGKIVGSDLQHRMPSEPTERHKLKLLP 337

Query: 360 XXXXXESSEPSVTEYPQGYRLGNDSSHVETAHQAHGHANFVKPVSAGTESGKELGQRPKL 419
                ESSEP+V +Y QG R  NDS HVET +QAHGHANFVKPVSAGT+SGK+ GQRPKL
Sbjct: 338 RAKPVESSEPAVMDYAQGNRHVNDSGHVETVYQAHGHANFVKPVSAGTDSGKDSGQRPKL 397

Query: 420 NLKPRSQPLEKLEVNTETGRNALFGGGRPRELVLKERGVDDVAINTYDVVENSNRVEPNI 479
           NLKPRSQP+E+L+ N+E  RN LFGG RPRELVLKERG+DDVAIN YDVVE+SNRV    
Sbjct: 398 NLKPRSQPIEQLDGNSERDRNVLFGGARPRELVLKERGIDDVAINNYDVVEHSNRV---- 453

Query: 480 LKAEKLPDPSIQSRHGEKANDAPLDQRTGRKPERKEQRVDGERGHSQKRNWRGGDNRRNA 539
              EKLPD S Q+R+GEK  DA LDQ+TGRKPERKEQRVDGER H+Q+RNWR GD RRN 
Sbjct: 454 ---EKLPDHSTQTRYGEKTEDAHLDQKTGRKPERKEQRVDGERAHAQRRNWR-GDTRRNG 509

Query: 540 RETERQQPAPERPASPETWRKPVE-QPKPSQGVGGPRNGRAASAVELAQAFSRSVSDPKV 598
           +E+ RQ PA ER  SPETWRKP E QPK + G  G R GRAASAVELAQAFS+SVSDPKV
Sbjct: 510 KESNRQPPALERQPSPETWRKPAEQQPKSAPGAAGTRYGRAASAVELAQAFSKSVSDPKV 569

Query: 599 NDRFSGQNGLNTGRTQ-QMPFSRLVGPTPRPQINGY 633
           ND+FSGQ GLNTG ++ Q+PFSRLVGPT RPQINGY
Sbjct: 570 NDKFSGQRGLNTGNSRTQVPFSRLVGPTSRPQINGY 605


>Glyma08g06610.2 
          Length = 590

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/637 (68%), Positives = 477/637 (74%), Gaps = 51/637 (8%)

Query: 1   MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDRSGFDRPSSWGAPMGRPDHWS 60
           MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDR+GFDRPS+WG PMGR DHWS
Sbjct: 1   MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDRAGFDRPSAWGTPMGRSDHWS 60

Query: 61  RPHTSPATRHYDDKTPFLSHTAPIGRNFDEDERKPLDGGSAPRRTVSDESTRA-PPPSRV 119
           RPHTSPATRHYDDKTPFLSHTAPIGRNFDEDERKPLDGGS PRRT+SDES R  PPP   
Sbjct: 61  RPHTSPATRHYDDKTPFLSHTAPIGRNFDEDERKPLDGGSMPRRTISDESIRGGPPPRVE 120

Query: 120 EVKPEYGLGGSSLGRQVAPVSPAAVGTVNSYSARLTEAVHTGMNTHSLGGSKERXXXXXX 179
              PE+GLGGSSLGRQVAPVS   VG  NSYS RLT+A                      
Sbjct: 121 VRPPEFGLGGSSLGRQVAPVSQTPVGAGNSYSGRLTDAGTAAGGG--------------- 165

Query: 180 XXXXXXXYPNVWSMRKEVANAVEAEQSARSGANAVSKLAHASALEKVSSGRWQSKAAHYQ 239
                  YPN WSMRKEVA+AVE EQ A S A A SKLAHASALEKVSSGRWQSKA +YQ
Sbjct: 166 ------GYPNAWSMRKEVASAVEPEQPAWSSAGAASKLAHASALEKVSSGRWQSKAVNYQ 219

Query: 240 NDAELVRSPEAESRQXXXXXXXXXXXXMDAVGEKEYYDAMLARQAERGLGIDNQMQGGRN 299
            DAE+VRSPE E+R                            R AERGLGIDN MQGGRN
Sbjct: 220 TDAEVVRSPEVENRPHDGG----------------------TRHAERGLGIDNPMQGGRN 257

Query: 300 ELLDYEKSGVSKYPEVRPRSVPYQSDGVQPARNVGKLVGSELKNPVPSEPTEXXXXXXXX 359
           EL +YE+SGVS+Y +VRP S P+ S GVQ ARN GK+VGS+L++P+PSE TE        
Sbjct: 258 ELPNYERSGVSRYSDVRPTSAPHHSGGVQLARNDGKIVGSDLQHPMPSELTERPKLKLLP 317

Query: 360 XXXXXESSEPSVTEYPQGYRLGNDSSHVETAHQAHGHANFVKPVSAGTESGKELGQRPKL 419
                ESSEP+V +Y QG R  NDS HVET +QAHGHANFVKPVSAG ++GK+ GQRPKL
Sbjct: 318 RAKPVESSEPAVMDYAQGNRQVNDSGHVETVYQAHGHANFVKPVSAGNDNGKDAGQRPKL 377

Query: 420 NLKPRSQPLEKLEVNTETGRNALFGGGRPRELVLKERGVDDVAINTYDVVENSNRVEPNI 479
           NLKPRSQP EKL+ N+E  RN LFGG RPRELVLKERG+DDV+IN   VVE+SNRVE NI
Sbjct: 378 NLKPRSQPTEKLDGNSERDRNVLFGGARPRELVLKERGIDDVSIN---VVEHSNRVENNI 434

Query: 480 LKAEKLPDPSIQSRHGEKANDAPLDQRTGRKPERKEQRVDGERGHSQKRNWRGGDNRRNA 539
           L+ +K PD S Q+R+GEK  DA LDQ+TGRKPERKEQR DG+R H+Q+RNWR GD RRN 
Sbjct: 435 LRVQKHPDHSTQTRYGEKTEDAHLDQKTGRKPERKEQRADGDRAHAQRRNWR-GDTRRNG 493

Query: 540 RETERQQPAPERPASPETWRKPVEQP-KPSQGVGGPRNGRAASAVELAQAFSRSVSDPKV 598
           +ET+RQ  APER  SPETWRKPVEQ  K + G    R  RAASAVELAQAFSRSVSDPKV
Sbjct: 494 KETDRQPHAPERQPSPETWRKPVEQQLKSAPGAASTRYSRAASAVELAQAFSRSVSDPKV 553

Query: 599 NDRFSGQNGLNTGRTQ--QMPFSRLVGPTPRPQINGY 633
           NDRFSGQ GLNTG +   Q+PFSRLVGPT RPQINGY
Sbjct: 554 NDRFSGQRGLNTGNSSRTQVPFSRLVGPTSRPQINGY 590


>Glyma08g06610.3 
          Length = 429

 Score =  580 bits (1495), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 318/475 (66%), Positives = 348/475 (73%), Gaps = 47/475 (9%)

Query: 1   MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDRSGFDRPSSWGAPMGRPDHWS 60
           MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDR+GFDRPS+WG PMGR DHWS
Sbjct: 1   MSKKKVSGNTMTLKDFHGGSIPSDLPLPSAPGVTVRTSDRAGFDRPSAWGTPMGRSDHWS 60

Query: 61  RPHTSPATRHYDDKTPFLSHTAPIGRNFDEDERKPLDGGSAPRRTVSDESTRA-PPPSRV 119
           RPHTSPATRHYDDKTPFLSHTAPIGRNFDEDERKPLDGGS PRRT+SDES R  PPP   
Sbjct: 61  RPHTSPATRHYDDKTPFLSHTAPIGRNFDEDERKPLDGGSMPRRTISDESIRGGPPPRVE 120

Query: 120 EVKPEYGLGGSSLGRQVAPVSPAAVGTVNSYSARLTEAVHTGMNTHSLGGSKERXXXXXX 179
              PE+GLGGSSLGRQVAPVS   VG  NSYS RLT+A                      
Sbjct: 121 VRPPEFGLGGSSLGRQVAPVSQTPVGAGNSYSGRLTDAGTAAGGG--------------- 165

Query: 180 XXXXXXXYPNVWSMRKEVANAVEAEQSARSGANAVSKLAHASALEKVSSGRWQSKAAHYQ 239
                  YPN WSMRKEVA+AVE EQ A S A A SKLAHASALEKVSSGRWQSKA +YQ
Sbjct: 166 ------GYPNAWSMRKEVASAVEPEQPAWSSAGAASKLAHASALEKVSSGRWQSKAVNYQ 219

Query: 240 NDAELVRSPEAESRQXXXXXXXXXXXXMDAVGEKEYYDAMLARQAERGLGIDNQMQGGRN 299
            DAE+VRSPE E+R                            R AERGLGIDN MQGGRN
Sbjct: 220 TDAEVVRSPEVENRPHDGG----------------------TRHAERGLGIDNPMQGGRN 257

Query: 300 ELLDYEKSGVSKYPEVRPRSVPYQSDGVQPARNVGKLVGSELKNPVPSEPTEXXXXXXXX 359
           EL +YE+SGVS+Y +VRP S P+ S GVQ ARN GK+VGS+L++P+PSE TE        
Sbjct: 258 ELPNYERSGVSRYSDVRPTSAPHHSGGVQLARNDGKIVGSDLQHPMPSELTERPKLKLLP 317

Query: 360 XXXXXESSEPSVTEYPQGYRLGNDSSHVETAHQAHGHANFVKPVSAGTESGKELGQRPKL 419
                ESSEP+V +Y QG R  NDS HVET +QAHGHANFVKPVSAG ++GK+ GQRPKL
Sbjct: 318 RAKPVESSEPAVMDYAQGNRQVNDSGHVETVYQAHGHANFVKPVSAGNDNGKDAGQRPKL 377

Query: 420 NLKPRSQPLEKLEVNTETGRNALFGGGRPRELVLKERGVDDVAINTYDVVENSNR 474
           NLKPRSQP EKL+ N+E  RN LFGG RPRELVLKERG+DDV+IN   VVE+SNR
Sbjct: 378 NLKPRSQPTEKLDGNSERDRNVLFGGARPRELVLKERGIDDVSIN---VVEHSNR 429