Miyakogusa Predicted Gene

Lj4g3v0409480.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0409480.1 tr|G7JU04|G7JU04_MEDTR Glutamyl-tRNA reductase
OS=Medicago truncatula GN=MTR_4g092820 PE=3 SV=1,75.43,0,Glutamyl
tRNA-reductase catalytic, N-terminal domain,Tetrapyrrole biosynthesis,
glutamyl-tRNA reduct,CUFF.47062.1
         (535 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g30350.1                                                       742   0.0  
Glyma08g06900.1                                                       739   0.0  
Glyma04g09520.1                                                       652   0.0  
Glyma06g09630.1                                                       648   0.0  
Glyma14g36420.1                                                       641   0.0  
Glyma02g38280.1                                                       639   0.0  

>Glyma07g30350.1 
          Length = 533

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/511 (72%), Positives = 417/511 (81%), Gaps = 9/511 (1%)

Query: 27  PPNQIRILSKPSSSTLRLSLNPRCSNLA--QNPVPKNAVVXXXXXXXXXXXXAADRYTKE 84
           PP+Q+     P +   R S+N  C   +   N +P+N V             +ADRYTKE
Sbjct: 30  PPSQLFF---PRA---RFSVNATCPFFSDNNNSLPQNVVASKPSPLELLKASSADRYTKE 83

Query: 85  KSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCNRIEIYVVA 144
           KS II IGLN+HTAPVE+REKLAI E  W Q I++LC LNHIEEAAVLSTCNR+EIYVVA
Sbjct: 84  KSCIICIGLNIHTAPVEMREKLAIPESHWAQAIKDLCALNHIEEAAVLSTCNRMEIYVVA 143

Query: 145 LSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLVLGEGQILA 204
           LSQ+RGV+EVT WMSK+SG+ IPEL EHQ+LLYN D TQHLFEVAAGLDSLVLGEGQILA
Sbjct: 144 LSQHRGVKEVTDWMSKVSGISIPELCEHQVLLYNADVTQHLFEVAAGLDSLVLGEGQILA 203

Query: 205 XXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXELAQMKLSE 264
                        GF + +SG+FKQAIS GKRVR+ETNI            ELA MKL +
Sbjct: 204 QVKQVVKAGQGVPGFDKKISGLFKQAISVGKRVRTETNISSGSVSVSSAAVELALMKLPD 263

Query: 265 SSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDADIVFRPLS 324
           SSFAD+ VLV+G+GKMG+LVIK+LAAKGC++MV+VNRTEEKVNAIR+E+KD +IVFRP S
Sbjct: 264 SSFADSGVLVVGAGKMGKLVIKHLAAKGCRRMVVVNRTEEKVNAIRKELKDVEIVFRPFS 323

Query: 325 EMLDCAAEADVIFTSTASESPLFSKENVERLPLVSQGARRRLFIDISMPRNVEPGVSDLE 384
           +ML CAAEADVIFTSTASESPLFSK+NV+ LPLV+ G RRRLF+DIS+PRNVEPGVSDLE
Sbjct: 324 DMLACAAEADVIFTSTASESPLFSKQNVQMLPLVNHG-RRRLFVDISIPRNVEPGVSDLE 382

Query: 385 TALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPTIKKFRAYAE 444
           TALVYNVDDL+EVVAANKEDRLQKA EARGII EELNKFEAWKDSLETVPTIKKFRAY E
Sbjct: 383 TALVYNVDDLKEVVAANKEDRLQKAEEARGIILEELNKFEAWKDSLETVPTIKKFRAYVE 442

Query: 445 RISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGNDNRCLSEVLE 504
           RI +SE+EKCLSKMG D+SK+QKDAIY+L MGIVNKLLHGPMQHLRCDG ++  LSEVLE
Sbjct: 443 RIRASEMEKCLSKMGPDVSKQQKDAIYALSMGIVNKLLHGPMQHLRCDGKNDSSLSEVLE 502

Query: 505 NMRALNRMYDLETETSLIEEKIKAKMERVQK 535
           NMRALNRMYDLETE SLIEEKI+ KMERVQK
Sbjct: 503 NMRALNRMYDLETEISLIEEKIRVKMERVQK 533


>Glyma08g06900.1 
          Length = 535

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/514 (71%), Positives = 418/514 (81%), Gaps = 12/514 (2%)

Query: 27  PPNQIRILSKPSSSTLRLSLNPRCSNLAQN-----PVPKNAVVXXXXXXXXXXXXAADRY 81
           PP+Q   LS P +   R S+N  C   + N      +P++ V             AADRY
Sbjct: 29  PPSQ---LSFPRA---RFSVNATCPFFSDNNGNKISLPQDVVASKPSPLELLKTSAADRY 82

Query: 82  TKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCNRIEIY 141
           TKEKSSII IGLN+HTAPVE+REKL+I E  W QVI++LC LNHIEEAAVLSTCNR+EIY
Sbjct: 83  TKEKSSIICIGLNIHTAPVEMREKLSIPESHWAQVIKDLCALNHIEEAAVLSTCNRMEIY 142

Query: 142 VVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLVLGEGQ 201
           VVALSQ+RGV+EVT WMSK+SG+ IPEL+EHQ+LLYN  A QHLFEVA+GLDSLVLGEGQ
Sbjct: 143 VVALSQHRGVKEVTDWMSKVSGISIPELREHQVLLYNAYAAQHLFEVASGLDSLVLGEGQ 202

Query: 202 ILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXELAQMK 261
           ILA             GF + +SG+FKQAIS GKRVR+ETNI            ELA MK
Sbjct: 203 ILAQVKQVVKAGQGVPGFDKKISGLFKQAISVGKRVRTETNISSGSVSVSSAAVELALMK 262

Query: 262 LSESSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDADIVFR 321
           L +SSFAD+ VLV+G+GKMG+LVIK+LAAKGC+KMV+VNRTEEKVNAIR+E+KD +I+FR
Sbjct: 263 LPDSSFADSGVLVVGAGKMGKLVIKHLAAKGCRKMVVVNRTEEKVNAIRKELKDVEILFR 322

Query: 322 PLSEMLDCAAEADVIFTSTASESPLFSKENVERLPLVSQGARRRLFIDISMPRNVEPGVS 381
           P+S+ML CAAEADVIFTST SES LFSKENV+ LPLVS G RRRLF+DIS+PRNVEP VS
Sbjct: 323 PISDMLACAAEADVIFTSTTSESSLFSKENVQMLPLVSHG-RRRLFVDISIPRNVEPSVS 381

Query: 382 DLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPTIKKFRA 441
           DLETALVYNVDDL+EVVAANKEDRLQKA EARGII EELNKFEAWKDSLETVPTIKKFRA
Sbjct: 382 DLETALVYNVDDLKEVVAANKEDRLQKAEEARGIILEELNKFEAWKDSLETVPTIKKFRA 441

Query: 442 YAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGNDNRCLSE 501
           Y ERI +SE+EKCLSKMG D+SK+ KDAIY+L MGIVNKLLHGPMQHLRCDG ++  LSE
Sbjct: 442 YVERIRASEMEKCLSKMGPDVSKQHKDAIYALSMGIVNKLLHGPMQHLRCDGKNDSSLSE 501

Query: 502 VLENMRALNRMYDLETETSLIEEKIKAKMERVQK 535
           VLENMRALNRMYDLETETSLIEEKI+ KMERVQK
Sbjct: 502 VLENMRALNRMYDLETETSLIEEKIRVKMERVQK 535


>Glyma04g09520.1 
          Length = 539

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/460 (68%), Positives = 377/460 (81%), Gaps = 1/460 (0%)

Query: 77  AADRYTKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCN 136
           AADRYTKE+SSIIAIGL+VHTAPVE+REKLAI E +WP+ I ELC LNHIEEAAVLSTCN
Sbjct: 80  AADRYTKERSSIIAIGLSVHTAPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCN 139

Query: 137 RIEIYVVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLV 196
           R+EIYV+ALSQ+RGV+EV +WMSK S VP+ EL +H+ LLYN DATQHLFEV+AGLDSLV
Sbjct: 140 RMEIYVLALSQHRGVKEVMEWMSKTSSVPVSELSQHRFLLYNNDATQHLFEVSAGLDSLV 199

Query: 197 LGEGQILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXE 256
           LGEGQIL+            +GFG+ +SG+FK AI+ GKRVR+ETNI            E
Sbjct: 200 LGEGQILSQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIASGAVSVSSAAVE 259

Query: 257 LAQMKLSESSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDA 316
           LA MKL E+S  +AR+LVIG+GKMG+LVIK+L AKGCKKMV+VNRTEE+V AIR E+KD 
Sbjct: 260 LAYMKLPEASHDNARMLVIGAGKMGKLVIKHLVAKGCKKMVVVNRTEERVAAIREELKDI 319

Query: 317 DIVFRPLSEMLDCAAEADVIFTSTASESPLFSKENVERLPLVSQG-ARRRLFIDISMPRN 375
           +I+++PLSEML CA EAD++FTSTASE+PLF KE+V+ LP  SQ    RR FIDIS+PRN
Sbjct: 320 EIIYKPLSEMLTCAGEADLVFTSTASENPLFLKEHVKDLPPASQEVGGRRFFIDISVPRN 379

Query: 376 VEPGVSDLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPT 435
           V   VSDLE+  VYNVDDL+EVVAANKEDRL+KAMEA+ II EE  +FEAW+DSLETVPT
Sbjct: 380 VGSCVSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIAEESKQFEAWRDSLETVPT 439

Query: 436 IKKFRAYAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGND 495
           IKK RAYAERI  +E+EKCL KMG+DI K+ + A+  L  GIVNKLLHGPMQHLRCDGND
Sbjct: 440 IKKLRAYAERIRLAELEKCLGKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGND 499

Query: 496 NRCLSEVLENMRALNRMYDLETETSLIEEKIKAKMERVQK 535
           +R LSE LENM ALNRM++LETE S++EEKI+AK+E+ QK
Sbjct: 500 SRTLSETLENMNALNRMFNLETEISVLEEKIRAKVEQNQK 539


>Glyma06g09630.1 
          Length = 536

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/491 (65%), Positives = 381/491 (77%), Gaps = 9/491 (1%)

Query: 49  RCSNLAQNP---VPKNAVVXXXXXXXXXXXXAADRYTKEKSSIIAIGLNVHTAPVELREK 105
           RC  LA +     P NA              AADRYTKE+SSII IGL+VHTAPVE+REK
Sbjct: 51  RCDALASDASSVAPNNATALEQLKIS-----AADRYTKERSSIIVIGLSVHTAPVEMREK 105

Query: 106 LAIAEEKWPQVIEELCGLNHIEEAAVLSTCNRIEIYVVALSQNRGVREVTQWMSKMSGVP 165
           LAI E +WP+ I ELC LNHIEEAA+LSTCNR+EIYVVALSQ+RGV+EV +WMSK S + 
Sbjct: 106 LAIPEAEWPRAIAELCSLNHIEEAAILSTCNRMEIYVVALSQHRGVKEVMEWMSKTSSIH 165

Query: 166 IPELQEHQMLLYNKDATQHLFEVAAGLDSLVLGEGQILAXXXXXXXXXXXXSGFGQMMSG 225
           + EL +H+ LLYN DATQHLFEV+AGLDSLVLGEGQILA            SGFG+ +SG
Sbjct: 166 VSELSQHRFLLYNNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVSGFGRNISG 225

Query: 226 MFKQAISAGKRVRSETNIXXXXXXXXXXXXELAQMKLSESSFADARVLVIGSGKMGRLVI 285
           +FK AI+ GKRVR+ETNI            ELA MKL E+S  +AR+LV+G+GKMG+LVI
Sbjct: 226 LFKHAITVGKRVRTETNIASGAVSVSSAAVELAYMKLLEASHDNARMLVVGAGKMGKLVI 285

Query: 286 KNLAAKGCKKMVIVNRTEEKVNAIRREMKDADIVFRPLSEMLDCAAEADVIFTSTASESP 345
           K+L AK CKKMV+VNRTEE+V AIR E+KD +I+++PLSEML CA EADV+FTSTASESP
Sbjct: 286 KHLVAKSCKKMVVVNRTEERVAAIREELKDIEIIYKPLSEMLTCAGEADVVFTSTASESP 345

Query: 346 LFSKENVERLPLVSQG-ARRRLFIDISMPRNVEPGVSDLETALVYNVDDLREVVAANKED 404
           LF K +V+ LP  +Q    RR FIDIS+PRNV   VSDLE+  VYNVDDL+EVVAANKED
Sbjct: 346 LFLKHHVKDLPPANQDVGGRRFFIDISVPRNVGSCVSDLESVRVYNVDDLKEVVAANKED 405

Query: 405 RLQKAMEARGIIQEELNKFEAWKDSLETVPTIKKFRAYAERISSSEVEKCLSKMGNDISK 464
           RL+KAMEA+ II EE  +FEAW+DSLETVPTIKK RAYAERI  +E+EKCL KMG+DI K
Sbjct: 406 RLRKAMEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLGKMGDDIPK 465

Query: 465 EQKDAIYSLGMGIVNKLLHGPMQHLRCDGNDNRCLSEVLENMRALNRMYDLETETSLIEE 524
           + + A+  L  GIVNKLLHGPMQHLRCDGND+R LSE LENM ALNRM++LETE S++EE
Sbjct: 466 KTRRAVDDLSRGIVNKLLHGPMQHLRCDGNDSRTLSETLENMHALNRMFNLETEISVLEE 525

Query: 525 KIKAKMERVQK 535
           KI+AK+E+ QK
Sbjct: 526 KIRAKVEQNQK 536


>Glyma14g36420.1 
          Length = 538

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/457 (66%), Positives = 376/457 (82%), Gaps = 1/457 (0%)

Query: 77  AADRYTKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCN 136
           AADRYTKE+SSI+ IGL+VH+ PVE+REKLAI E +WP+ I ELC LNHIEEAAVLSTCN
Sbjct: 80  AADRYTKERSSIMVIGLSVHSTPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCN 139

Query: 137 RIEIYVVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLV 196
           R+EIYVVALS++RGV+EVT+WMSK SG+P+ +L +HQ LLYNKDATQHLFEV+AGLDSLV
Sbjct: 140 RMEIYVVALSKHRGVKEVTEWMSKTSGIPVADLCQHQFLLYNKDATQHLFEVSAGLDSLV 199

Query: 197 LGEGQILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXE 256
           LGEGQILA            +GFG+ +SG+FK AI+ GKRVR+ETNI            E
Sbjct: 200 LGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVE 259

Query: 257 LAQMKLSESSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDA 316
           LA MKL E+S A+AR+LVIG+GKMG+LVIK+L AKGC KMV+VNR++E+V AI  E+KD 
Sbjct: 260 LALMKLPEASHANARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSQERVTAIHEEIKDV 319

Query: 317 DIVFRPLSEMLDCAAEADVIFTSTASESPLFSKENVERL-PLVSQGARRRLFIDISMPRN 375
           +I+++PLSEML C  EADV+FTSTASE+PLF K++V+ L P  ++   RRLF+DIS+PRN
Sbjct: 320 EIIYKPLSEMLTCIGEADVVFTSTASENPLFLKDDVKDLPPATNEVGGRRLFVDISVPRN 379

Query: 376 VEPGVSDLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPT 435
           V   +SDLE+  VYNVDDL+EVVAANKEDRL+KAMEA+ II EE  +FEAW+DSLETVPT
Sbjct: 380 VGSCLSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEESKQFEAWRDSLETVPT 439

Query: 436 IKKFRAYAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGND 495
           IKK RAYAERI  +E+EKCL KMG+DI+K+ + A+  L  GIVNKLLHGPMQHLRCDG+D
Sbjct: 440 IKKLRAYAERIRLAELEKCLGKMGDDINKKTQRAVDDLSRGIVNKLLHGPMQHLRCDGSD 499

Query: 496 NRCLSEVLENMRALNRMYDLETETSLIEEKIKAKMER 532
           +R LSE LENM ALNRM++LETE S++E+KI+AK+E+
Sbjct: 500 SRTLSETLENMHALNRMFNLETEISVLEQKIRAKVEQ 536


>Glyma02g38280.1 
          Length = 542

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/457 (66%), Positives = 375/457 (82%), Gaps = 1/457 (0%)

Query: 77  AADRYTKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCN 136
           AADRYTKE+SS++ IGL+VH+ PVE+REKLAI E +WP+ I ELC LNHIEEAAVLSTCN
Sbjct: 84  AADRYTKERSSVMVIGLSVHSTPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCN 143

Query: 137 RIEIYVVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLV 196
           R+EIYVVALS++RGV+EVT+WMSK SG+P+ +L +HQ LLYNKDATQHLFEV+AGLDSLV
Sbjct: 144 RMEIYVVALSKHRGVKEVTEWMSKTSGIPVADLCQHQFLLYNKDATQHLFEVSAGLDSLV 203

Query: 197 LGEGQILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXE 256
           LGEGQILA            +GFG+ +SG+FK AI+ GKRVR+ETNI            E
Sbjct: 204 LGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVE 263

Query: 257 LAQMKLSESSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDA 316
           LA MKL E+S A+AR+LVIG+GKMG+LVIK+L AKGC KMV+VNR+EE+V AI  E+KD 
Sbjct: 264 LALMKLPEASHANARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIHEEIKDV 323

Query: 317 DIVFRPLSEMLDCAAEADVIFTSTASESPLFSKENVERL-PLVSQGARRRLFIDISMPRN 375
           +I+++PLSEML C  EADV+FTSTASE+PLF K++V+ L P   +   RRLF+DIS+PRN
Sbjct: 324 EIIYKPLSEMLTCIGEADVVFTSTASENPLFLKDDVKELPPATDEVGGRRLFVDISVPRN 383

Query: 376 VEPGVSDLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPT 435
           V   +SDLE+  VYNVDDL+EVVAANKEDRL+KAMEA+ II EE  +FEAW+DSLETVPT
Sbjct: 384 VGSCLSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEESKQFEAWRDSLETVPT 443

Query: 436 IKKFRAYAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGND 495
           IKK RAYAERI  +E+EKCL KMG+DI+K+ + A+  L  GIVNKLLHGPMQHLRCDG+D
Sbjct: 444 IKKLRAYAERIRLAELEKCLGKMGDDINKKTQRAVDDLSRGIVNKLLHGPMQHLRCDGSD 503

Query: 496 NRCLSEVLENMRALNRMYDLETETSLIEEKIKAKMER 532
           +R LSE LENM ALNRM++LETE S++E+KI+AK+E+
Sbjct: 504 SRTLSETLENMHALNRMFNLETEISVLEQKIRAKVEQ 540