Miyakogusa Predicted Gene
- Lj4g3v0409480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0409480.1 tr|G7JU04|G7JU04_MEDTR Glutamyl-tRNA reductase
OS=Medicago truncatula GN=MTR_4g092820 PE=3 SV=1,75.43,0,Glutamyl
tRNA-reductase catalytic, N-terminal domain,Tetrapyrrole biosynthesis,
glutamyl-tRNA reduct,CUFF.47062.1
(535 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g30350.1 742 0.0
Glyma08g06900.1 739 0.0
Glyma04g09520.1 652 0.0
Glyma06g09630.1 648 0.0
Glyma14g36420.1 641 0.0
Glyma02g38280.1 639 0.0
>Glyma07g30350.1
Length = 533
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/511 (72%), Positives = 417/511 (81%), Gaps = 9/511 (1%)
Query: 27 PPNQIRILSKPSSSTLRLSLNPRCSNLA--QNPVPKNAVVXXXXXXXXXXXXAADRYTKE 84
PP+Q+ P + R S+N C + N +P+N V +ADRYTKE
Sbjct: 30 PPSQLFF---PRA---RFSVNATCPFFSDNNNSLPQNVVASKPSPLELLKASSADRYTKE 83
Query: 85 KSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCNRIEIYVVA 144
KS II IGLN+HTAPVE+REKLAI E W Q I++LC LNHIEEAAVLSTCNR+EIYVVA
Sbjct: 84 KSCIICIGLNIHTAPVEMREKLAIPESHWAQAIKDLCALNHIEEAAVLSTCNRMEIYVVA 143
Query: 145 LSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLVLGEGQILA 204
LSQ+RGV+EVT WMSK+SG+ IPEL EHQ+LLYN D TQHLFEVAAGLDSLVLGEGQILA
Sbjct: 144 LSQHRGVKEVTDWMSKVSGISIPELCEHQVLLYNADVTQHLFEVAAGLDSLVLGEGQILA 203
Query: 205 XXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXELAQMKLSE 264
GF + +SG+FKQAIS GKRVR+ETNI ELA MKL +
Sbjct: 204 QVKQVVKAGQGVPGFDKKISGLFKQAISVGKRVRTETNISSGSVSVSSAAVELALMKLPD 263
Query: 265 SSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDADIVFRPLS 324
SSFAD+ VLV+G+GKMG+LVIK+LAAKGC++MV+VNRTEEKVNAIR+E+KD +IVFRP S
Sbjct: 264 SSFADSGVLVVGAGKMGKLVIKHLAAKGCRRMVVVNRTEEKVNAIRKELKDVEIVFRPFS 323
Query: 325 EMLDCAAEADVIFTSTASESPLFSKENVERLPLVSQGARRRLFIDISMPRNVEPGVSDLE 384
+ML CAAEADVIFTSTASESPLFSK+NV+ LPLV+ G RRRLF+DIS+PRNVEPGVSDLE
Sbjct: 324 DMLACAAEADVIFTSTASESPLFSKQNVQMLPLVNHG-RRRLFVDISIPRNVEPGVSDLE 382
Query: 385 TALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPTIKKFRAYAE 444
TALVYNVDDL+EVVAANKEDRLQKA EARGII EELNKFEAWKDSLETVPTIKKFRAY E
Sbjct: 383 TALVYNVDDLKEVVAANKEDRLQKAEEARGIILEELNKFEAWKDSLETVPTIKKFRAYVE 442
Query: 445 RISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGNDNRCLSEVLE 504
RI +SE+EKCLSKMG D+SK+QKDAIY+L MGIVNKLLHGPMQHLRCDG ++ LSEVLE
Sbjct: 443 RIRASEMEKCLSKMGPDVSKQQKDAIYALSMGIVNKLLHGPMQHLRCDGKNDSSLSEVLE 502
Query: 505 NMRALNRMYDLETETSLIEEKIKAKMERVQK 535
NMRALNRMYDLETE SLIEEKI+ KMERVQK
Sbjct: 503 NMRALNRMYDLETEISLIEEKIRVKMERVQK 533
>Glyma08g06900.1
Length = 535
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/514 (71%), Positives = 418/514 (81%), Gaps = 12/514 (2%)
Query: 27 PPNQIRILSKPSSSTLRLSLNPRCSNLAQN-----PVPKNAVVXXXXXXXXXXXXAADRY 81
PP+Q LS P + R S+N C + N +P++ V AADRY
Sbjct: 29 PPSQ---LSFPRA---RFSVNATCPFFSDNNGNKISLPQDVVASKPSPLELLKTSAADRY 82
Query: 82 TKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCNRIEIY 141
TKEKSSII IGLN+HTAPVE+REKL+I E W QVI++LC LNHIEEAAVLSTCNR+EIY
Sbjct: 83 TKEKSSIICIGLNIHTAPVEMREKLSIPESHWAQVIKDLCALNHIEEAAVLSTCNRMEIY 142
Query: 142 VVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLVLGEGQ 201
VVALSQ+RGV+EVT WMSK+SG+ IPEL+EHQ+LLYN A QHLFEVA+GLDSLVLGEGQ
Sbjct: 143 VVALSQHRGVKEVTDWMSKVSGISIPELREHQVLLYNAYAAQHLFEVASGLDSLVLGEGQ 202
Query: 202 ILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXELAQMK 261
ILA GF + +SG+FKQAIS GKRVR+ETNI ELA MK
Sbjct: 203 ILAQVKQVVKAGQGVPGFDKKISGLFKQAISVGKRVRTETNISSGSVSVSSAAVELALMK 262
Query: 262 LSESSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDADIVFR 321
L +SSFAD+ VLV+G+GKMG+LVIK+LAAKGC+KMV+VNRTEEKVNAIR+E+KD +I+FR
Sbjct: 263 LPDSSFADSGVLVVGAGKMGKLVIKHLAAKGCRKMVVVNRTEEKVNAIRKELKDVEILFR 322
Query: 322 PLSEMLDCAAEADVIFTSTASESPLFSKENVERLPLVSQGARRRLFIDISMPRNVEPGVS 381
P+S+ML CAAEADVIFTST SES LFSKENV+ LPLVS G RRRLF+DIS+PRNVEP VS
Sbjct: 323 PISDMLACAAEADVIFTSTTSESSLFSKENVQMLPLVSHG-RRRLFVDISIPRNVEPSVS 381
Query: 382 DLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPTIKKFRA 441
DLETALVYNVDDL+EVVAANKEDRLQKA EARGII EELNKFEAWKDSLETVPTIKKFRA
Sbjct: 382 DLETALVYNVDDLKEVVAANKEDRLQKAEEARGIILEELNKFEAWKDSLETVPTIKKFRA 441
Query: 442 YAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGNDNRCLSE 501
Y ERI +SE+EKCLSKMG D+SK+ KDAIY+L MGIVNKLLHGPMQHLRCDG ++ LSE
Sbjct: 442 YVERIRASEMEKCLSKMGPDVSKQHKDAIYALSMGIVNKLLHGPMQHLRCDGKNDSSLSE 501
Query: 502 VLENMRALNRMYDLETETSLIEEKIKAKMERVQK 535
VLENMRALNRMYDLETETSLIEEKI+ KMERVQK
Sbjct: 502 VLENMRALNRMYDLETETSLIEEKIRVKMERVQK 535
>Glyma04g09520.1
Length = 539
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/460 (68%), Positives = 377/460 (81%), Gaps = 1/460 (0%)
Query: 77 AADRYTKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCN 136
AADRYTKE+SSIIAIGL+VHTAPVE+REKLAI E +WP+ I ELC LNHIEEAAVLSTCN
Sbjct: 80 AADRYTKERSSIIAIGLSVHTAPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCN 139
Query: 137 RIEIYVVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLV 196
R+EIYV+ALSQ+RGV+EV +WMSK S VP+ EL +H+ LLYN DATQHLFEV+AGLDSLV
Sbjct: 140 RMEIYVLALSQHRGVKEVMEWMSKTSSVPVSELSQHRFLLYNNDATQHLFEVSAGLDSLV 199
Query: 197 LGEGQILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXE 256
LGEGQIL+ +GFG+ +SG+FK AI+ GKRVR+ETNI E
Sbjct: 200 LGEGQILSQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIASGAVSVSSAAVE 259
Query: 257 LAQMKLSESSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDA 316
LA MKL E+S +AR+LVIG+GKMG+LVIK+L AKGCKKMV+VNRTEE+V AIR E+KD
Sbjct: 260 LAYMKLPEASHDNARMLVIGAGKMGKLVIKHLVAKGCKKMVVVNRTEERVAAIREELKDI 319
Query: 317 DIVFRPLSEMLDCAAEADVIFTSTASESPLFSKENVERLPLVSQG-ARRRLFIDISMPRN 375
+I+++PLSEML CA EAD++FTSTASE+PLF KE+V+ LP SQ RR FIDIS+PRN
Sbjct: 320 EIIYKPLSEMLTCAGEADLVFTSTASENPLFLKEHVKDLPPASQEVGGRRFFIDISVPRN 379
Query: 376 VEPGVSDLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPT 435
V VSDLE+ VYNVDDL+EVVAANKEDRL+KAMEA+ II EE +FEAW+DSLETVPT
Sbjct: 380 VGSCVSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIAEESKQFEAWRDSLETVPT 439
Query: 436 IKKFRAYAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGND 495
IKK RAYAERI +E+EKCL KMG+DI K+ + A+ L GIVNKLLHGPMQHLRCDGND
Sbjct: 440 IKKLRAYAERIRLAELEKCLGKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGND 499
Query: 496 NRCLSEVLENMRALNRMYDLETETSLIEEKIKAKMERVQK 535
+R LSE LENM ALNRM++LETE S++EEKI+AK+E+ QK
Sbjct: 500 SRTLSETLENMNALNRMFNLETEISVLEEKIRAKVEQNQK 539
>Glyma06g09630.1
Length = 536
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/491 (65%), Positives = 381/491 (77%), Gaps = 9/491 (1%)
Query: 49 RCSNLAQNP---VPKNAVVXXXXXXXXXXXXAADRYTKEKSSIIAIGLNVHTAPVELREK 105
RC LA + P NA AADRYTKE+SSII IGL+VHTAPVE+REK
Sbjct: 51 RCDALASDASSVAPNNATALEQLKIS-----AADRYTKERSSIIVIGLSVHTAPVEMREK 105
Query: 106 LAIAEEKWPQVIEELCGLNHIEEAAVLSTCNRIEIYVVALSQNRGVREVTQWMSKMSGVP 165
LAI E +WP+ I ELC LNHIEEAA+LSTCNR+EIYVVALSQ+RGV+EV +WMSK S +
Sbjct: 106 LAIPEAEWPRAIAELCSLNHIEEAAILSTCNRMEIYVVALSQHRGVKEVMEWMSKTSSIH 165
Query: 166 IPELQEHQMLLYNKDATQHLFEVAAGLDSLVLGEGQILAXXXXXXXXXXXXSGFGQMMSG 225
+ EL +H+ LLYN DATQHLFEV+AGLDSLVLGEGQILA SGFG+ +SG
Sbjct: 166 VSELSQHRFLLYNNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVSGFGRNISG 225
Query: 226 MFKQAISAGKRVRSETNIXXXXXXXXXXXXELAQMKLSESSFADARVLVIGSGKMGRLVI 285
+FK AI+ GKRVR+ETNI ELA MKL E+S +AR+LV+G+GKMG+LVI
Sbjct: 226 LFKHAITVGKRVRTETNIASGAVSVSSAAVELAYMKLLEASHDNARMLVVGAGKMGKLVI 285
Query: 286 KNLAAKGCKKMVIVNRTEEKVNAIRREMKDADIVFRPLSEMLDCAAEADVIFTSTASESP 345
K+L AK CKKMV+VNRTEE+V AIR E+KD +I+++PLSEML CA EADV+FTSTASESP
Sbjct: 286 KHLVAKSCKKMVVVNRTEERVAAIREELKDIEIIYKPLSEMLTCAGEADVVFTSTASESP 345
Query: 346 LFSKENVERLPLVSQG-ARRRLFIDISMPRNVEPGVSDLETALVYNVDDLREVVAANKED 404
LF K +V+ LP +Q RR FIDIS+PRNV VSDLE+ VYNVDDL+EVVAANKED
Sbjct: 346 LFLKHHVKDLPPANQDVGGRRFFIDISVPRNVGSCVSDLESVRVYNVDDLKEVVAANKED 405
Query: 405 RLQKAMEARGIIQEELNKFEAWKDSLETVPTIKKFRAYAERISSSEVEKCLSKMGNDISK 464
RL+KAMEA+ II EE +FEAW+DSLETVPTIKK RAYAERI +E+EKCL KMG+DI K
Sbjct: 406 RLRKAMEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLGKMGDDIPK 465
Query: 465 EQKDAIYSLGMGIVNKLLHGPMQHLRCDGNDNRCLSEVLENMRALNRMYDLETETSLIEE 524
+ + A+ L GIVNKLLHGPMQHLRCDGND+R LSE LENM ALNRM++LETE S++EE
Sbjct: 466 KTRRAVDDLSRGIVNKLLHGPMQHLRCDGNDSRTLSETLENMHALNRMFNLETEISVLEE 525
Query: 525 KIKAKMERVQK 535
KI+AK+E+ QK
Sbjct: 526 KIRAKVEQNQK 536
>Glyma14g36420.1
Length = 538
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/457 (66%), Positives = 376/457 (82%), Gaps = 1/457 (0%)
Query: 77 AADRYTKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCN 136
AADRYTKE+SSI+ IGL+VH+ PVE+REKLAI E +WP+ I ELC LNHIEEAAVLSTCN
Sbjct: 80 AADRYTKERSSIMVIGLSVHSTPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCN 139
Query: 137 RIEIYVVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLV 196
R+EIYVVALS++RGV+EVT+WMSK SG+P+ +L +HQ LLYNKDATQHLFEV+AGLDSLV
Sbjct: 140 RMEIYVVALSKHRGVKEVTEWMSKTSGIPVADLCQHQFLLYNKDATQHLFEVSAGLDSLV 199
Query: 197 LGEGQILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXE 256
LGEGQILA +GFG+ +SG+FK AI+ GKRVR+ETNI E
Sbjct: 200 LGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVE 259
Query: 257 LAQMKLSESSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDA 316
LA MKL E+S A+AR+LVIG+GKMG+LVIK+L AKGC KMV+VNR++E+V AI E+KD
Sbjct: 260 LALMKLPEASHANARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSQERVTAIHEEIKDV 319
Query: 317 DIVFRPLSEMLDCAAEADVIFTSTASESPLFSKENVERL-PLVSQGARRRLFIDISMPRN 375
+I+++PLSEML C EADV+FTSTASE+PLF K++V+ L P ++ RRLF+DIS+PRN
Sbjct: 320 EIIYKPLSEMLTCIGEADVVFTSTASENPLFLKDDVKDLPPATNEVGGRRLFVDISVPRN 379
Query: 376 VEPGVSDLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPT 435
V +SDLE+ VYNVDDL+EVVAANKEDRL+KAMEA+ II EE +FEAW+DSLETVPT
Sbjct: 380 VGSCLSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEESKQFEAWRDSLETVPT 439
Query: 436 IKKFRAYAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGND 495
IKK RAYAERI +E+EKCL KMG+DI+K+ + A+ L GIVNKLLHGPMQHLRCDG+D
Sbjct: 440 IKKLRAYAERIRLAELEKCLGKMGDDINKKTQRAVDDLSRGIVNKLLHGPMQHLRCDGSD 499
Query: 496 NRCLSEVLENMRALNRMYDLETETSLIEEKIKAKMER 532
+R LSE LENM ALNRM++LETE S++E+KI+AK+E+
Sbjct: 500 SRTLSETLENMHALNRMFNLETEISVLEQKIRAKVEQ 536
>Glyma02g38280.1
Length = 542
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/457 (66%), Positives = 375/457 (82%), Gaps = 1/457 (0%)
Query: 77 AADRYTKEKSSIIAIGLNVHTAPVELREKLAIAEEKWPQVIEELCGLNHIEEAAVLSTCN 136
AADRYTKE+SS++ IGL+VH+ PVE+REKLAI E +WP+ I ELC LNHIEEAAVLSTCN
Sbjct: 84 AADRYTKERSSVMVIGLSVHSTPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCN 143
Query: 137 RIEIYVVALSQNRGVREVTQWMSKMSGVPIPELQEHQMLLYNKDATQHLFEVAAGLDSLV 196
R+EIYVVALS++RGV+EVT+WMSK SG+P+ +L +HQ LLYNKDATQHLFEV+AGLDSLV
Sbjct: 144 RMEIYVVALSKHRGVKEVTEWMSKTSGIPVADLCQHQFLLYNKDATQHLFEVSAGLDSLV 203
Query: 197 LGEGQILAXXXXXXXXXXXXSGFGQMMSGMFKQAISAGKRVRSETNIXXXXXXXXXXXXE 256
LGEGQILA +GFG+ +SG+FK AI+ GKRVR+ETNI E
Sbjct: 204 LGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVE 263
Query: 257 LAQMKLSESSFADARVLVIGSGKMGRLVIKNLAAKGCKKMVIVNRTEEKVNAIRREMKDA 316
LA MKL E+S A+AR+LVIG+GKMG+LVIK+L AKGC KMV+VNR+EE+V AI E+KD
Sbjct: 264 LALMKLPEASHANARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIHEEIKDV 323
Query: 317 DIVFRPLSEMLDCAAEADVIFTSTASESPLFSKENVERL-PLVSQGARRRLFIDISMPRN 375
+I+++PLSEML C EADV+FTSTASE+PLF K++V+ L P + RRLF+DIS+PRN
Sbjct: 324 EIIYKPLSEMLTCIGEADVVFTSTASENPLFLKDDVKELPPATDEVGGRRLFVDISVPRN 383
Query: 376 VEPGVSDLETALVYNVDDLREVVAANKEDRLQKAMEARGIIQEELNKFEAWKDSLETVPT 435
V +SDLE+ VYNVDDL+EVVAANKEDRL+KAMEA+ II EE +FEAW+DSLETVPT
Sbjct: 384 VGSCLSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEESKQFEAWRDSLETVPT 443
Query: 436 IKKFRAYAERISSSEVEKCLSKMGNDISKEQKDAIYSLGMGIVNKLLHGPMQHLRCDGND 495
IKK RAYAERI +E+EKCL KMG+DI+K+ + A+ L GIVNKLLHGPMQHLRCDG+D
Sbjct: 444 IKKLRAYAERIRLAELEKCLGKMGDDINKKTQRAVDDLSRGIVNKLLHGPMQHLRCDGSD 503
Query: 496 NRCLSEVLENMRALNRMYDLETETSLIEEKIKAKMER 532
+R LSE LENM ALNRM++LETE S++E+KI+AK+E+
Sbjct: 504 SRTLSETLENMHALNRMFNLETEISVLEQKIRAKVEQ 540