Miyakogusa Predicted Gene

Lj4g3v0388280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0388280.1 Non Chatacterized Hit- tr|I1JDV6|I1JDV6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.66,0,seg,NULL;
Med25_VWA,Mediator complex, subunit Med25, von Willebrand factor type
A; OS09G0306700 PROT,NODE_35263_length_2214_cov_94.314812.path2.1
         (685 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g10880.1                                                      1069   0.0  
Glyma02g10900.2                                                       398   e-110
Glyma02g10900.1                                                       398   e-110
Glyma02g10900.3                                                       397   e-110
Glyma01g21710.1                                                       112   1e-24
Glyma01g21840.1                                                        95   3e-19
Glyma01g21680.2                                                        60   7e-09

>Glyma02g10880.1 
          Length = 877

 Score = 1069 bits (2765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/682 (78%), Positives = 572/682 (83%), Gaps = 3/682 (0%)

Query: 3   AEKQLIVAVECTAAMGPYWSTILTDYLEKIIRSFAGNESTGQKPSASNVEFALVTYNTHG 62
           AEKQLIVAVE TAAMGPYW+TIL DYL+K+IR F GN+STGQK SASNVEFALVTYNTHG
Sbjct: 2   AEKQLIVAVESTAAMGPYWNTILMDYLDKMIRCFGGNDSTGQKFSASNVEFALVTYNTHG 61

Query: 63  CYSGFLVQRTGWTREPDVFFSWLSGVPFSGGGFNDGAIAEGLSEALMMFPNSQSGSPNQQ 122
           CYS  LVQR+GWTR+PDVFFSWLS +PF+GGGFND AIAEGLSEALMM  NSQSG+PNQQ
Sbjct: 62  CYSSCLVQRSGWTRDPDVFFSWLSSIPFNGGGFNDAAIAEGLSEALMMLWNSQSGAPNQQ 121

Query: 123 NVDIHKHCILVAASNPYPLQTPVYVPRPQSLEKSETIDSDPGNRLYDAEAVAKAFPQFSI 182
           +VD+HKHCILVAASNPYPLQTPVYVPRPQ+LE+SETIDSD G+ LYDAEAVAKAFPQFSI
Sbjct: 122 SVDMHKHCILVAASNPYPLQTPVYVPRPQNLEQSETIDSDSGSHLYDAEAVAKAFPQFSI 181

Query: 183 SLSVICPKQLPKVKAIYNAGKRTSRAADPPVDVKTTHFLVLISEAFREASSALSRSGITS 242
           SLSVICPKQLPK+K+IYNAGKR +RAADPP++ KT HFL+LISE FREA  ALSRSGITS
Sbjct: 182 SLSVICPKQLPKIKSIYNAGKRNNRAADPPLEAKTPHFLILISEGFREARGALSRSGITS 241

Query: 243 LPSNQSPVKVDAVSVTPVTGAPPTSLPSVNGSIASRQPISAGNVAPATVKVEPVPVTSMV 302
           LPSNQSPVKVDAVSVTPVTGAPPTS+P VNGSI +RQP+ AGNVAPATVKVEPVPVTSMV
Sbjct: 242 LPSNQSPVKVDAVSVTPVTGAPPTSMP-VNGSIPNRQPVPAGNVAPATVKVEPVPVTSMV 300

Query: 303 AGPAFPHNSSVPRAAITGQGIXXXXXXXXXXXXXDIMTNTENGQDTKPMASMLQQPLRPV 362
           +GPAFPHNSSVPRA  T QG+             DI+TN E  QDTKP  SML  PLRPV
Sbjct: 301 SGPAFPHNSSVPRATSTSQGVPSLQTSSPSSVSQDIITNNETAQDTKPTVSML--PLRPV 358

Query: 363 NPAQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMASSVPAA 422
           NP QANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGM SSVPAA
Sbjct: 359 NPVQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSVPAA 418

Query: 423 QNVFXXXXXXXXXXXXXXXLTAPAQVGQXXXXXXXXXXXXXXXXXXXVGISQPLSNLQGA 482
           QNVF               LT PAQVGQ                   +GISQPL NLQG 
Sbjct: 419 QNVFSSGQSGITSMTSSGPLTVPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNLQGV 478

Query: 483 VSMGQQVPGMSQGNISGTXXXXXXXXXXXXXXXXLGQSVVSSGNGTMIPTPGMSQQVQSG 542
           VS+GQQV GMSQGN+SG                 LGQSVVSSG GTMIPTPGMSQ VQS 
Sbjct: 479 VSIGQQVSGMSQGNLSGAQMVQGGVSMNQNVMSGLGQSVVSSGTGTMIPTPGMSQPVQSV 538

Query: 543 VQPLVNNAAANMTLPQQTSGGMQATQSKYLKVWEGSLSGQRQGQPVFITKLEGYRSASAP 602
           +QPLVNNAAANM L QQTSGGMQ+ QSKY+KVWEGSLSGQRQGQPVFITKLEGYR++SA 
Sbjct: 539 MQPLVNNAAANMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSAS 598

Query: 603 ETIAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAVIQLP 662
           ET+AANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAVIQLP
Sbjct: 599 ETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAVIQLP 658

Query: 663 SQTLLLSVSDKACRLIGMLFPG 684
           SQTLLLSVSDKA RLIGMLFPG
Sbjct: 659 SQTLLLSVSDKAFRLIGMLFPG 680


>Glyma02g10900.2 
          Length = 266

 Score =  398 bits (1023), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/233 (79%), Positives = 204/233 (87%), Gaps = 1/233 (0%)

Query: 3   AEKQLIVAVECTAAMGPYWSTILTDYLEKIIRSFAGNESTGQKPSASNVEFALVTYNTHG 62
           A K+LIV VE TAAMGPYW TIL DYL+KIIR F  N+ST Q  S SNVEFALV+YNTHG
Sbjct: 2   AAKRLIVVVESTAAMGPYWETILRDYLDKIIRCFGENDSTVQN-SCSNVEFALVSYNTHG 60

Query: 63  CYSGFLVQRTGWTREPDVFFSWLSGVPFSGGGFNDGAIAEGLSEALMMFPNSQSGSPNQQ 122
           CYSG LVQRTGWTR+PDVFF WLS +PFSGGGFND  IAEGL+EAL+MFPNSQSG PNQQ
Sbjct: 61  CYSGCLVQRTGWTRDPDVFFMWLSSIPFSGGGFNDAVIAEGLAEALVMFPNSQSGDPNQQ 120

Query: 123 NVDIHKHCILVAASNPYPLQTPVYVPRPQSLEKSETIDSDPGNRLYDAEAVAKAFPQFSI 182
           NVD+H+HCILVAASNPYPLQTP+YVP+ Q+LE+SETIDS PGNRLYDAEAVAKAFPQFSI
Sbjct: 121 NVDMHQHCILVAASNPYPLQTPIYVPQLQNLEQSETIDSFPGNRLYDAEAVAKAFPQFSI 180

Query: 183 SLSVICPKQLPKVKAIYNAGKRTSRAADPPVDVKTTHFLVLISEAFREASSAL 235
           SLSVICPK+LPK+K IYNAG R S+AADPPV  KT HFL+LISE FREA  AL
Sbjct: 181 SLSVICPKELPKIKGIYNAGNRNSKAADPPVLAKTPHFLILISEGFREAQGAL 233


>Glyma02g10900.1 
          Length = 266

 Score =  398 bits (1023), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/233 (79%), Positives = 204/233 (87%), Gaps = 1/233 (0%)

Query: 3   AEKQLIVAVECTAAMGPYWSTILTDYLEKIIRSFAGNESTGQKPSASNVEFALVTYNTHG 62
           A K+LIV VE TAAMGPYW TIL DYL+KIIR F  N+ST Q  S SNVEFALV+YNTHG
Sbjct: 2   AAKRLIVVVESTAAMGPYWETILRDYLDKIIRCFGENDSTVQN-SCSNVEFALVSYNTHG 60

Query: 63  CYSGFLVQRTGWTREPDVFFSWLSGVPFSGGGFNDGAIAEGLSEALMMFPNSQSGSPNQQ 122
           CYSG LVQRTGWTR+PDVFF WLS +PFSGGGFND  IAEGL+EAL+MFPNSQSG PNQQ
Sbjct: 61  CYSGCLVQRTGWTRDPDVFFMWLSSIPFSGGGFNDAVIAEGLAEALVMFPNSQSGDPNQQ 120

Query: 123 NVDIHKHCILVAASNPYPLQTPVYVPRPQSLEKSETIDSDPGNRLYDAEAVAKAFPQFSI 182
           NVD+H+HCILVAASNPYPLQTP+YVP+ Q+LE+SETIDS PGNRLYDAEAVAKAFPQFSI
Sbjct: 121 NVDMHQHCILVAASNPYPLQTPIYVPQLQNLEQSETIDSFPGNRLYDAEAVAKAFPQFSI 180

Query: 183 SLSVICPKQLPKVKAIYNAGKRTSRAADPPVDVKTTHFLVLISEAFREASSAL 235
           SLSVICPK+LPK+K IYNAG R S+AADPPV  KT HFL+LISE FREA  AL
Sbjct: 181 SLSVICPKELPKIKGIYNAGNRNSKAADPPVLAKTPHFLILISEGFREAQGAL 233


>Glyma02g10900.3 
          Length = 247

 Score =  397 bits (1020), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/233 (79%), Positives = 204/233 (87%), Gaps = 1/233 (0%)

Query: 3   AEKQLIVAVECTAAMGPYWSTILTDYLEKIIRSFAGNESTGQKPSASNVEFALVTYNTHG 62
           A K+LIV VE TAAMGPYW TIL DYL+KIIR F  N+ST Q  S SNVEFALV+YNTHG
Sbjct: 2   AAKRLIVVVESTAAMGPYWETILRDYLDKIIRCFGENDSTVQN-SCSNVEFALVSYNTHG 60

Query: 63  CYSGFLVQRTGWTREPDVFFSWLSGVPFSGGGFNDGAIAEGLSEALMMFPNSQSGSPNQQ 122
           CYSG LVQRTGWTR+PDVFF WLS +PFSGGGFND  IAEGL+EAL+MFPNSQSG PNQQ
Sbjct: 61  CYSGCLVQRTGWTRDPDVFFMWLSSIPFSGGGFNDAVIAEGLAEALVMFPNSQSGDPNQQ 120

Query: 123 NVDIHKHCILVAASNPYPLQTPVYVPRPQSLEKSETIDSDPGNRLYDAEAVAKAFPQFSI 182
           NVD+H+HCILVAASNPYPLQTP+YVP+ Q+LE+SETIDS PGNRLYDAEAVAKAFPQFSI
Sbjct: 121 NVDMHQHCILVAASNPYPLQTPIYVPQLQNLEQSETIDSFPGNRLYDAEAVAKAFPQFSI 180

Query: 183 SLSVICPKQLPKVKAIYNAGKRTSRAADPPVDVKTTHFLVLISEAFREASSAL 235
           SLSVICPK+LPK+K IYNAG R S+AADPPV  KT HFL+LISE FREA  AL
Sbjct: 181 SLSVICPKELPKIKGIYNAGNRNSKAADPPVLAKTPHFLILISEGFREAQGAL 233


>Glyma01g21710.1 
          Length = 2070

 Score =  112 bits (281), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/66 (78%), Positives = 57/66 (86%), Gaps = 3/66 (4%)

Query: 45   KPSASNVEFALVTYNTHGCYSGFLVQRTGWTREPDVFFSWLSGVPFSGGGFNDGAIAEGL 104
            K SAS VEFALVTYNTHGC    LVQR+GWTR+PDVFF WLS +PF+GGGFND AIAEGL
Sbjct: 1990 KSSASIVEFALVTYNTHGC---CLVQRSGWTRDPDVFFLWLSSIPFNGGGFNDAAIAEGL 2046

Query: 105  SEALMM 110
            SEALM+
Sbjct: 2047 SEALMV 2052



 Score = 60.8 bits (146), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/32 (84%), Positives = 29/32 (90%)

Query: 3  AEKQLIVAVECTAAMGPYWSTILTDYLEKIIR 34
          AEKQLIVAVE TAAMGPYW TIL DYL+K+IR
Sbjct: 2  AEKQLIVAVESTAAMGPYWDTILMDYLDKMIR 33


>Glyma01g21840.1 
          Length = 158

 Score = 94.7 bits (234), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/63 (73%), Positives = 51/63 (80%), Gaps = 1/63 (1%)

Query: 3  AEKQLIVAVECTAAMGPYWSTILTDYLEKIIRSFAGNESTGQKPSASNVEFALVTYNTHG 62
          A K+LIV VE TAAMGPYW TIL DYL+KIIR F  N ST Q  S+S+VEFALV+YNTHG
Sbjct: 2  AAKRLIVVVESTAAMGPYWETILRDYLDKIIRCFGENVSTVQN-SSSSVEFALVSYNTHG 60

Query: 63 CYS 65
          CYS
Sbjct: 61 CYS 63



 Score = 52.8 bits (125), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/24 (83%), Positives = 22/24 (91%)

Query: 68  LVQRTGWTREPDVFFSWLSGVPFS 91
           LVQRTGWTR+PDVFF WLS +PFS
Sbjct: 134 LVQRTGWTRDPDVFFLWLSSIPFS 157


>Glyma01g21680.2 
          Length = 229

 Score = 60.1 bits (144), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/29 (96%), Positives = 28/29 (96%)

Query: 656 CAVIQLPSQTLLLSVSDKACRLIGMLFPG 684
           CAVIQLPSQTLLLSVSDKA RLIGMLFPG
Sbjct: 49  CAVIQLPSQTLLLSVSDKAFRLIGMLFPG 77