Miyakogusa Predicted Gene

Lj4g3v0388240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0388240.1 Non Chatacterized Hit- tr|G7JV29|G7JV29_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,53.41,8e-17,zf-met,NULL; ZINC_FINGER_C2H2_1,Zinc finger,
C2H2; C2H2 and C2HC zinc fingers,NULL; U1-like zinc fin,CUFF.47042.1
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07120.1                                                       170   7e-43
Glyma17g27180.1                                                        62   3e-10
Glyma17g08060.1                                                        60   1e-09
Glyma02g36630.1                                                        50   1e-06
Glyma02g36630.2                                                        50   1e-06

>Glyma08g07120.1 
          Length = 386

 Score =  170 bits (430), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 89/174 (51%), Positives = 113/174 (64%), Gaps = 6/174 (3%)

Query: 1   MPSLAPTQIASSTIVEMKGIAGKGRAGEEFPWSSTHKEVQKEWTCALCQVTVSREEDLNS 60
           +P+L P+Q AS  +VE K + GK  A  E P SSTHKEVQKEWTCALC VT S E+ L  
Sbjct: 215 VPNLVPSQNASPAMVETKILVGKDTASGELPESSTHKEVQKEWTCALCHVTTSSEKTLID 274

Query: 61  HLQGRKHRAADEAIKAKTQSVPQKLRNFLHKEEWKQKTISNQLSYNAKNGESIVNIDQKG 120
           HL GRKH+A  E++KA+ Q VP K+++   K++ KQK +  Q++   K+GE +      G
Sbjct: 275 HLHGRKHKATCESLKAQNQPVPHKVKSDQSKDDLKQKNVIYQINSKTKSGEKV------G 328

Query: 121 NVVMDHKVRELQKNLYEPVRMNYSKLRCEACNVCCSTEFDLACHLNGRKHLANI 174
              MDHKV++LQK LYEP   + SK  CE CNV C  E  LA H NG+KHLA I
Sbjct: 329 KEAMDHKVQKLQKKLYEPAGTSNSKFLCEVCNVYCPCEIALASHKNGKKHLAKI 382


>Glyma17g27180.1 
          Length = 361

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 6/143 (4%)

Query: 34  STHKEVQKEWTCALCQVTVSREEDLNSHLQGRKHRAADEAIKAKTQSVPQKLRNFLHKEE 93
           S  K+ +KEWTC LCQ++ + E+ LN H+QG+KH+A  E+   +TQ + ++ +  L  ++
Sbjct: 198 SLRKKAKKEWTCELCQISTTSEKGLNDHIQGKKHKANKES--TRTQKIGKRKKTTLSLKK 255

Query: 94  WKQKTISNQLSYNAKNGESIVNI--DQKGNVVMDHKVRELQKNLYEPVRMNYSKLRCEAC 151
                  ++  +         N+  ++KG VV   K + L +      +       CE C
Sbjct: 256 RLDSRPESETLHPCFTPADTCNMESEEKGQVV--PKSKGLAQETSALSKGKKFDFWCELC 313

Query: 152 NVCCSTEFDLACHLNGRKHLANI 174
            V   +E  +  H NG+KHL N+
Sbjct: 314 QVQTQSEIVMQSHQNGKKHLRNM 336


>Glyma17g08060.1 
          Length = 330

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 21/146 (14%)

Query: 34  STHKEVQKEWTCALCQVTVSREEDLNSHLQGRKHRAADEAIKAKTQSVPQKLRNFLHKEE 93
           S  K+ +KEWTC LCQ++ + E+ LN H+QG+KH+A  E+   +TQ + ++         
Sbjct: 192 SLQKKAKKEWTCELCQISTTSEKGLNDHIQGKKHKANKES--TRTQKIGKR--------- 240

Query: 94  WKQKTISNQLSYNAKNGESIVN-----IDQKGNVVMDHKVRELQKNLYEPVRMNYSKLRC 148
            K+ T+S +   +++     ++      D +       + +E       P +    +  C
Sbjct: 241 -KKTTLSLKKRLDSRPERETLHPCLTPADDQNETTTIKQAQETSA----PSKGKKFEFWC 295

Query: 149 EACNVCCSTEFDLACHLNGRKHLANI 174
           E C V   +E  +  H NG+KHL N+
Sbjct: 296 ELCQVQTHSEIVMQSHKNGKKHLRNM 321


>Glyma02g36630.1 
          Length = 332

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 29/36 (80%)

Query: 34  STHKEVQKEWTCALCQVTVSREEDLNSHLQGRKHRA 69
           S  K+ ++EW+C LCQ+T + E+ LN+HL+G+KH+A
Sbjct: 195 SVEKKPKREWSCGLCQITTTNEKGLNNHLEGKKHKA 230


>Glyma02g36630.2 
          Length = 326

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 29/36 (80%)

Query: 34  STHKEVQKEWTCALCQVTVSREEDLNSHLQGRKHRA 69
           S  K+ ++EW+C LCQ+T + E+ LN+HL+G+KH+A
Sbjct: 189 SVEKKPKREWSCGLCQITTTNEKGLNNHLEGKKHKA 224