Miyakogusa Predicted Gene

Lj4g3v0385840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0385840.1 Non Chatacterized Hit- tr|H9VI41|H9VI41_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=C,63.64,4e-17,coiled-coil,NULL; COPI_assoc,Golgi apparatus membrane
protein TVP15; seg,NULL,CUFF.47026.1
         (197 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07230.2                                                       251   4e-67
Glyma08g07230.1                                                       251   4e-67
Glyma07g30080.1                                                       248   3e-66
Glyma13g32980.1                                                       226   1e-59
Glyma07g30080.2                                                       127   6e-30
Glyma0737s00200.1                                                      48   7e-06

>Glyma08g07230.2 
          Length = 195

 Score =  251 bits (641), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 123/148 (83%), Positives = 133/148 (89%)

Query: 30  DPFLVTCKCFSVITSLAAILCIAVNVLSAVRSFKNASDIFDGIFRCYAVVIAAFVVLAET 89
           DPFLV C+CFS +TSLAAILCIAVNVLSAVRSFK+ASDIFDGIFRCYAV+IAAFVVLAET
Sbjct: 28  DPFLVACRCFSFLTSLAAILCIAVNVLSAVRSFKHASDIFDGIFRCYAVLIAAFVVLAET 87

Query: 90  EWSFIIKFSQVLEYWAARGMLQIFVGVMTRAFPDYTRAREWIILLQNIASYLLLACGFVY 149
           EWSFIIKFS+VLEYWAARGMLQIF  VMTRAFP Y   R  + LLQ+IASYLLLACG VY
Sbjct: 88  EWSFIIKFSKVLEYWAARGMLQIFAAVMTRAFPGYIGDRRDLFLLQSIASYLLLACGVVY 147

Query: 150 LISGVLCIGFLKRARQKQAITTEQAAKD 177
           ++SG+LCIGFLKRARQKQ IT EQA KD
Sbjct: 148 VVSGILCIGFLKRARQKQEITREQATKD 175


>Glyma08g07230.1 
          Length = 195

 Score =  251 bits (641), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 123/148 (83%), Positives = 133/148 (89%)

Query: 30  DPFLVTCKCFSVITSLAAILCIAVNVLSAVRSFKNASDIFDGIFRCYAVVIAAFVVLAET 89
           DPFLV C+CFS +TSLAAILCIAVNVLSAVRSFK+ASDIFDGIFRCYAV+IAAFVVLAET
Sbjct: 28  DPFLVACRCFSFLTSLAAILCIAVNVLSAVRSFKHASDIFDGIFRCYAVLIAAFVVLAET 87

Query: 90  EWSFIIKFSQVLEYWAARGMLQIFVGVMTRAFPDYTRAREWIILLQNIASYLLLACGFVY 149
           EWSFIIKFS+VLEYWAARGMLQIF  VMTRAFP Y   R  + LLQ+IASYLLLACG VY
Sbjct: 88  EWSFIIKFSKVLEYWAARGMLQIFAAVMTRAFPGYIGDRRDLFLLQSIASYLLLACGVVY 147

Query: 150 LISGVLCIGFLKRARQKQAITTEQAAKD 177
           ++SG+LCIGFLKRARQKQ IT EQA KD
Sbjct: 148 VVSGILCIGFLKRARQKQEITREQATKD 175


>Glyma07g30080.1 
          Length = 195

 Score =  248 bits (633), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 120/148 (81%), Positives = 131/148 (88%)

Query: 30  DPFLVTCKCFSVITSLAAILCIAVNVLSAVRSFKNASDIFDGIFRCYAVVIAAFVVLAET 89
           DPFLV C+CFS  TSLAAILCIAVN LSAVRSFK+ASDIFDGIFRCYAV++AAFVVLAET
Sbjct: 28  DPFLVACRCFSFFTSLAAILCIAVNFLSAVRSFKHASDIFDGIFRCYAVLVAAFVVLAET 87

Query: 90  EWSFIIKFSQVLEYWAARGMLQIFVGVMTRAFPDYTRAREWIILLQNIASYLLLACGFVY 149
           EWSFI+KFS+VLEYWAARGMLQIF  VMTRAFPDY   R  + LLQ+IASYLLL CG VY
Sbjct: 88  EWSFILKFSKVLEYWAARGMLQIFAAVMTRAFPDYIGDRRDLFLLQSIASYLLLGCGVVY 147

Query: 150 LISGVLCIGFLKRARQKQAITTEQAAKD 177
           ++SG+LCIGFLKRARQKQ IT EQA KD
Sbjct: 148 VVSGILCIGFLKRARQKQEITREQATKD 175


>Glyma13g32980.1 
          Length = 197

 Score =  226 bits (576), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/148 (70%), Positives = 125/148 (84%)

Query: 30  DPFLVTCKCFSVITSLAAILCIAVNVLSAVRSFKNASDIFDGIFRCYAVVIAAFVVLAET 89
           DPFL  CKCFS +  L+AILCIAVNVLSA+RSFK+ SDIFDGIFRCYAV +A FVVLAET
Sbjct: 32  DPFLSLCKCFSFVVVLSAILCIAVNVLSAIRSFKHQSDIFDGIFRCYAVFLACFVVLAET 91

Query: 90  EWSFIIKFSQVLEYWAARGMLQIFVGVMTRAFPDYTRAREWIILLQNIASYLLLACGFVY 149
           EW+FIIKF +VLEYW  RGMLQIFV VMTRAFPDY+  R+ +++ Q IA Y+LLACG +Y
Sbjct: 92  EWNFIIKFWKVLEYWVGRGMLQIFVAVMTRAFPDYSGERKELVIFQGIACYMLLACGSIY 151

Query: 150 LISGVLCIGFLKRARQKQAITTEQAAKD 177
           ++SG+LC+G LKR+RQKQ I+ EQA KD
Sbjct: 152 VVSGILCVGLLKRSRQKQEISREQAEKD 179


>Glyma07g30080.2 
          Length = 157

 Score =  127 bits (320), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 61/74 (82%), Positives = 68/74 (91%)

Query: 30  DPFLVTCKCFSVITSLAAILCIAVNVLSAVRSFKNASDIFDGIFRCYAVVIAAFVVLAET 89
           DPFLV C+CFS  TSLAAILCIAVN LSAVRSFK+ASDIFDGIFRCYAV++AAFVVLAET
Sbjct: 28  DPFLVACRCFSFFTSLAAILCIAVNFLSAVRSFKHASDIFDGIFRCYAVLVAAFVVLAET 87

Query: 90  EWSFIIKFSQVLEY 103
           EWSFI+KFS+V  +
Sbjct: 88  EWSFILKFSKVFRF 101


>Glyma0737s00200.1 
          Length = 56

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/29 (75%), Positives = 25/29 (86%)

Query: 30 DPFLVTCKCFSVITSLAAILCIAVNVLSA 58
          DPFLV C+CFS +TSLAAILCIAVN  S+
Sbjct: 28 DPFLVACRCFSFLTSLAAILCIAVNGASS 56