Miyakogusa Predicted Gene

Lj4g3v0340770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0340770.1 Non Chatacterized Hit- tr|B9SWA2|B9SWA2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,43.65,0.0000000000008,seg,NULL,CUFF.46995.1
         (240 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07830.1                                                       301   5e-82
Glyma08g07830.2                                                       291   3e-79
Glyma05g24600.1                                                       285   2e-77

>Glyma08g07830.1 
          Length = 248

 Score =  301 bits (770), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 162/249 (65%), Positives = 175/249 (70%), Gaps = 10/249 (4%)

Query: 1   MSLSLLQSYSSDEDEHH--QPYISNSDEDHDGD-----GEPSTAAHPSLADRSIFDHXXX 53
           MSLSL+Q YSS E+E    QP   NSD +   D     G  + A HPSL DRSIFDH   
Sbjct: 1   MSLSLIQGYSSAEEEQDEDQPQPHNSDLEDSDDDDAAAGTITAANHPSLGDRSIFDHVPN 60

Query: 54  XXXXXXX-XXFDAFSEVSGPPQFLNNSVEEYNPVXXXXXXXXXXXXXXXXXKVKKDLPSG 112
                     FDAFSE++GPPQFLNNSVEEY P                  K KKDLP+G
Sbjct: 61  PPSASGLPSAFDAFSEIAGPPQFLNNSVEEYKP-SRDADEQQGKHANRRRRKNKKDLPTG 119

Query: 113 AVLEAKPQLVGIHERVRSDINGSQPPXXXXXXXXXXXKRVPSVTNPTPEDAADLLRMCLQ 172
           AV+EAKPQLVGIHERVRSDINGSQPP           KRVP+ TNP  EDAADLLRMCLQ
Sbjct: 120 AVVEAKPQLVGIHERVRSDINGSQPPTSAALGTSEGGKRVPTATNPNAEDAADLLRMCLQ 179

Query: 173 CGIPKTFSNARGMVCPVCGDRPPK-DPSTETKNKGSTIKDKEKSKRMKGQSSHASWKSET 231
           CGIPKT+SNARGMVCPVCGDRPPK D S E+K KGST+KDKEKSKRMKGQSSHA+WKSET
Sbjct: 180 CGIPKTYSNARGMVCPVCGDRPPKDDTSAESKKKGSTVKDKEKSKRMKGQSSHATWKSET 239

Query: 232 EMHLRQQFD 240
           EMHLRQQFD
Sbjct: 240 EMHLRQQFD 248


>Glyma08g07830.2 
          Length = 246

 Score =  291 bits (746), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 160/249 (64%), Positives = 173/249 (69%), Gaps = 12/249 (4%)

Query: 1   MSLSLLQSYSSDEDEHH--QPYISNSDEDHDGD-----GEPSTAAHPSLADRSIFDHXXX 53
           MSLSL+Q YSS E+E    QP   NSD +   D     G  + A HPSL DRSIFDH   
Sbjct: 1   MSLSLIQGYSSAEEEQDEDQPQPHNSDLEDSDDDDAAAGTITAANHPSLGDRSIFDHVPN 60

Query: 54  XXXXXXX-XXFDAFSEVSGPPQFLNNSVEEYNPVXXXXXXXXXXXXXXXXXKVKKDLPSG 112
                     FDAFSE++GPPQFLNNSVEEY P                  K KKDLP+ 
Sbjct: 61  PPSASGLPSAFDAFSEIAGPPQFLNNSVEEYKP-SRDADEQQGKHANRRRRKNKKDLPT- 118

Query: 113 AVLEAKPQLVGIHERVRSDINGSQPPXXXXXXXXXXXKRVPSVTNPTPEDAADLLRMCLQ 172
            V+EAKPQLVGIHERVRSDINGSQPP           KRVP+ TNP  EDAADLLRMCLQ
Sbjct: 119 -VVEAKPQLVGIHERVRSDINGSQPPTSAALGTSEGGKRVPTATNPNAEDAADLLRMCLQ 177

Query: 173 CGIPKTFSNARGMVCPVCGDRPPK-DPSTETKNKGSTIKDKEKSKRMKGQSSHASWKSET 231
           CGIPKT+SNARGMVCPVCGDRPPK D S E+K KGST+KDKEKSKRMKGQSSHA+WKSET
Sbjct: 178 CGIPKTYSNARGMVCPVCGDRPPKDDTSAESKKKGSTVKDKEKSKRMKGQSSHATWKSET 237

Query: 232 EMHLRQQFD 240
           EMHLRQQFD
Sbjct: 238 EMHLRQQFD 246


>Glyma05g24600.1 
          Length = 243

 Score =  285 bits (730), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/244 (64%), Positives = 172/244 (70%), Gaps = 5/244 (2%)

Query: 1   MSLSLLQSYSSDEDEHHQPYISNSDEDHDGDGEPSTAAHPSLADRSIFDHXXXXXXXXXX 60
           MSLSL+Q YSS EDE  QP   +SD +   D   + A HPSL DRSIFDH          
Sbjct: 1   MSLSLIQGYSSAEDED-QPQPHDSDLEDSDDEAAAAANHPSLGDRSIFDHVPNPPSASGL 59

Query: 61  -XXFDAFSEVSGPPQFLNNSVEEYN--PVXXXXXXXXXXXXXXXXXKVKKDLPSGAVLEA 117
              FDAFSE++ PPQFLNNSVEEYN  P                  K KKDLP+GAV+EA
Sbjct: 60  PSAFDAFSEIAEPPQFLNNSVEEYNNNPSSRDADEQQGKHTNRRRRKDKKDLPTGAVVEA 119

Query: 118 KPQLVGIHERVRSDINGSQPPXXXXXXXXXXXKRVPSVTNPTPEDAADLLRMCLQCGIPK 177
           KPQLVGIHERVRSDINGSQ P           K  P+ TNP  EDAA+LLRMCLQCGIPK
Sbjct: 120 KPQLVGIHERVRSDINGSQAPTSAASGTSEGGKWAPTATNPNAEDAAELLRMCLQCGIPK 179

Query: 178 TFSNARGMVCPVCGDRPPK-DPSTETKNKGSTIKDKEKSKRMKGQSSHASWKSETEMHLR 236
           T+S+ARGMVCPVCGDRPPK D STE+K KGST+KDKEKSKRMKGQSSHA+WKSETEMHLR
Sbjct: 180 TYSSARGMVCPVCGDRPPKDDTSTESKKKGSTVKDKEKSKRMKGQSSHATWKSETEMHLR 239

Query: 237 QQFD 240
           QQFD
Sbjct: 240 QQFD 243