Miyakogusa Predicted Gene
- Lj4g3v0340710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0340710.1 Non Chatacterized Hit- tr|J3LSA8|J3LSA8_ORYBR
Uncharacterized protein (Fragment) OS=Oryza
brachyanth,50.75,0.000000000008,seg,NULL; Hyccin,Hyccin,CUFF.46958.1
(410 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g07860.2 360 1e-99
Glyma08g07860.1 360 1e-99
Glyma05g24630.1 353 1e-97
Glyma02g44120.1 170 3e-42
Glyma03g22630.1 87 4e-17
Glyma18g42370.1 55 1e-07
>Glyma08g07860.2
Length = 384
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/416 (51%), Positives = 235/416 (56%), Gaps = 38/416 (9%)
Query: 1 MEFHRXXXXXXXXXXXXXXAAGTPNPQKTDDPMHSWWESVSKARSRIHSLATILPNXXXX 60
MEFHR PN + DPMHSWWESVSKARSRIH+LA ILP+
Sbjct: 1 MEFHRSDSSSSPSSSTPTPNNADPNKTSSSDPMHSWWESVSKARSRIHALAAILPSSSSD 60
Query: 61 XXXXXXXXERPXXXXXXXXXXXXXXXXXXXXXXXDPLCHWLYDTFLSSDPXXXXXXXXXX 120
+RP DPLCHWLYDTFLSSDP
Sbjct: 61 SLSSLADSDRPALSLLSSPAAYAAVSSSLSGSHSDPLCHWLYDTFLSSDPHLRLVVLSFV 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXSGFEAVLLALYAAETKSRNGKPLIATVPDLSLPS 180
+GFEAVLLALYAAETKSRNGKPL+ T+PDLS PS
Sbjct: 121 PLLSGLYLSRIHSPEPPSL-------AGFEAVLLALYAAETKSRNGKPLVVTIPDLSHPS 173
Query: 181 IYHSPLRKPQNSNANAPS--SVAVISPPLEPLLAVKSTKRASIVGAALQSYFSQISHMPS 238
IYH+PLRKPQ+ S SV +ISPPLEP L VKSTKRASIVG AL S+FSQISHMP+
Sbjct: 174 IYHAPLRKPQSQTLTLASTPSVGLISPPLEPQLGVKSTKRASIVGVALHSFFSQISHMPA 233
Query: 239 WSKLEFCRFLAGWAGQ-DCPCRRDLDRVPXXXXXXXXXXXXXXXXXXXXCDREIEIESVG 297
WSKLEFC+F A WAG CPCR +LDR + +IE
Sbjct: 234 WSKLEFCQFAAAWAGSAHCPCRNELDR-------------------------DGKIEDFA 268
Query: 298 EMMGKVQIHDSDGL--AKGDRIPLPWEILQPALRILGHCLFAPLNPQEVKDAASFAVRCL 355
+ V+I D D L KG+RIPLPWEILQP+LRILGHCL PLN Q+VKDAASFAVRCL
Sbjct: 269 TAIENVRIRDGDYLEEGKGERIPLPWEILQPSLRILGHCLLGPLNSQDVKDAASFAVRCL 328
Query: 356 YARASHDLVPQAILATRSLIQLXXXXXXXXXXXXXXXXXXXX-XXXKKPEILLVSK 410
YARASHDLVPQAILATRSLIQL KKPEILLVSK
Sbjct: 329 YARASHDLVPQAILATRSLIQLDVRTREAARANAATNSNANTPTKAKKPEILLVSK 384
>Glyma08g07860.1
Length = 384
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/416 (51%), Positives = 235/416 (56%), Gaps = 38/416 (9%)
Query: 1 MEFHRXXXXXXXXXXXXXXAAGTPNPQKTDDPMHSWWESVSKARSRIHSLATILPNXXXX 60
MEFHR PN + DPMHSWWESVSKARSRIH+LA ILP+
Sbjct: 1 MEFHRSDSSSSPSSSTPTPNNADPNKTSSSDPMHSWWESVSKARSRIHALAAILPSSSSD 60
Query: 61 XXXXXXXXERPXXXXXXXXXXXXXXXXXXXXXXXDPLCHWLYDTFLSSDPXXXXXXXXXX 120
+RP DPLCHWLYDTFLSSDP
Sbjct: 61 SLSSLADSDRPALSLLSSPAAYAAVSSSLSGSHSDPLCHWLYDTFLSSDPHLRLVVLSFV 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXSGFEAVLLALYAAETKSRNGKPLIATVPDLSLPS 180
+GFEAVLLALYAAETKSRNGKPL+ T+PDLS PS
Sbjct: 121 PLLSGLYLSRIHSPEPPSL-------AGFEAVLLALYAAETKSRNGKPLVVTIPDLSHPS 173
Query: 181 IYHSPLRKPQNSNANAPS--SVAVISPPLEPLLAVKSTKRASIVGAALQSYFSQISHMPS 238
IYH+PLRKPQ+ S SV +ISPPLEP L VKSTKRASIVG AL S+FSQISHMP+
Sbjct: 174 IYHAPLRKPQSQTLTLASTPSVGLISPPLEPQLGVKSTKRASIVGVALHSFFSQISHMPA 233
Query: 239 WSKLEFCRFLAGWAGQ-DCPCRRDLDRVPXXXXXXXXXXXXXXXXXXXXCDREIEIESVG 297
WSKLEFC+F A WAG CPCR +LDR + +IE
Sbjct: 234 WSKLEFCQFAAAWAGSAHCPCRNELDR-------------------------DGKIEDFA 268
Query: 298 EMMGKVQIHDSDGL--AKGDRIPLPWEILQPALRILGHCLFAPLNPQEVKDAASFAVRCL 355
+ V+I D D L KG+RIPLPWEILQP+LRILGHCL PLN Q+VKDAASFAVRCL
Sbjct: 269 TAIENVRIRDGDYLEEGKGERIPLPWEILQPSLRILGHCLLGPLNSQDVKDAASFAVRCL 328
Query: 356 YARASHDLVPQAILATRSLIQLXXXXXXXXXXXXXXXXXXXX-XXXKKPEILLVSK 410
YARASHDLVPQAILATRSLIQL KKPEILLVSK
Sbjct: 329 YARASHDLVPQAILATRSLIQLDVRTREAARANAATNSNANTPTKAKKPEILLVSK 384
>Glyma05g24630.1
Length = 377
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/390 (52%), Positives = 225/390 (57%), Gaps = 35/390 (8%)
Query: 24 PNPQKTDDPMHSWWESVSKARSRIHSLATILPNXXXXXXXXXXXXERPXXXXXXXXXXXX 83
P DPMHSWWESVSKARSRIH+LA ILP+ +RP
Sbjct: 20 PKKNTCSDPMHSWWESVSKARSRIHALAAILPSSSSDSLSSLADSDRPALSLLSSPAAYS 79
Query: 84 XXXXXXXXXXXDPLCHWLYDTFLSSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 143
DPLCHWLYDTFLSSDP
Sbjct: 80 AVSSSLSGSHFDPLCHWLYDTFLSSDPHLRLVVLSFVPLLAGLYLSRIHSPEPPSL---- 135
Query: 144 XXXSGFEAVLLALYAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSNANAPSSVAVI 203
+GFEAVLLALYAAETKSRNGKPL+ T+PDLS PSIYH+PLRKPQ P SV +I
Sbjct: 136 ---AGFEAVLLALYAAETKSRNGKPLVVTIPDLSHPSIYHAPLRKPQTLTLITPPSVGLI 192
Query: 204 SPPLEPLLAVKSTKRASIVGAALQSYFSQISHMPSWSKLEFCRFLAGWAG--QDCPCRRD 261
SPPLEP L VKSTKRASIVG AL S+FSQISHMP+WSKL FC+F A WAG CPCR +
Sbjct: 193 SPPLEPQLGVKSTKRASIVGVALHSFFSQISHMPAWSKLHFCQFAAAWAGGASHCPCRNE 252
Query: 262 LDRVPXXXXXXXXXXXXXXXXXXXXCDREIEIESVGEMMGKVQIHDSDGLAKGDRIPLPW 321
LDR D EI + + + +I D D KG+RIPLPW
Sbjct: 253 LDR-----------------------DGEI-VGEINDFANTFEIRD-DTEGKGERIPLPW 287
Query: 322 EILQPALRILGHCLFAPLNPQEVKDAASFAVRCLYARASHDLVPQAILATRSLIQLXXXX 381
EILQP+LRILGHCL PLN Q+VKDAASFAVRCLYARASHDLVPQAILATRSLIQL
Sbjct: 288 EILQPSLRILGHCLLGPLNSQDVKDAASFAVRCLYARASHDLVPQAILATRSLIQLDVRT 347
Query: 382 XXXXXXXXXXXXXXXX-XXXKKPEILLVSK 410
KKPEILLVSK
Sbjct: 348 REAAKTNAATNSNANTPTKAKKPEILLVSK 377
>Glyma02g44120.1
Length = 343
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 152/289 (52%), Gaps = 39/289 (13%)
Query: 95 DPLCHWLYDTFLSSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFEAVLL 154
+ LC WLYDTF S +GFEAVLL
Sbjct: 64 NNLCRWLYDTFQSG---------VTELQLLVLRFLPVIAGVYLSRVADRKPQAGFEAVLL 114
Query: 155 ALYAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSNANAPSS----VAVISPPLEPL 210
ALYA ET SR G+ + T+PDL+ PS+YH P N+N N SS VAV+SP LEP
Sbjct: 115 ALYAHETTSRAGQAVSVTIPDLAQPSLYHDPKALTPNNNKNINSSTELNVAVVSPSLEPH 174
Query: 211 LAVKSTKRASIVGAALQSYFSQISHMPSWSKLEFCRFLAGWAGQDCPCRRDLDRVPXXXX 270
V+ST+RA IVG AL+ ++++I HMP SK++FC F WAGQD ++L+
Sbjct: 175 GTVRSTRRARIVGVALELFYAKIPHMPVSSKIDFCEFCKLWAGQDGDMYKNLEEE----- 229
Query: 271 XXXXXXXXXXXXXXXXCDREIEIESVGEMMGKVQIHDSDGLAKGDRIPLPWEILQPALRI 330
+ ESV + + ++ + + R+PLPWE+L+P LRI
Sbjct: 230 ------------------EDNGEESVVFVDAEAELEEKEKGKVESRVPLPWELLEPVLRI 271
Query: 331 LGHCLFAPLNPQEVK--DAASFAVRCLYARASHDLVPQAILATRSLIQL 377
LGHCL N ++V+ +AAS A RCL+AR+ HD+ +AIL RSL++L
Sbjct: 272 LGHCLLGQ-NKRDVELFEAASEACRCLFARSMHDVNAKAILPIRSLLRL 319
>Glyma03g22630.1
Length = 111
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 59/89 (66%), Gaps = 7/89 (7%)
Query: 148 GFEAVLLALYAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSNANAPSSVAVISPPL 207
GF+ VL A YA ETKSR+GK L+ T+ D IYH+P KP P SV +ISPPL
Sbjct: 25 GFKVVLSAFYATETKSRSGKLLVVTISD-----IYHTP--KPLALTLTPPPSVGLISPPL 77
Query: 208 EPLLAVKSTKRASIVGAALQSYFSQISHM 236
E L VKSTK ASIVG AL S+FSQ SH+
Sbjct: 78 EHQLNVKSTKPASIVGIALHSFFSQSSHV 106
>Glyma18g42370.1
Length = 101
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 147 SGFEAVLLALYAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSN 193
+GFE VLLALYAAETKS NGK L+ T+PD IY P KPQ++
Sbjct: 31 AGFEIVLLALYAAETKSHNGKLLVVTIPD-----IYQDPSIKPQHTT 72