Miyakogusa Predicted Gene

Lj4g3v0340710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0340710.1 Non Chatacterized Hit- tr|J3LSA8|J3LSA8_ORYBR
Uncharacterized protein (Fragment) OS=Oryza
brachyanth,50.75,0.000000000008,seg,NULL; Hyccin,Hyccin,CUFF.46958.1
         (410 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07860.2                                                       360   1e-99
Glyma08g07860.1                                                       360   1e-99
Glyma05g24630.1                                                       353   1e-97
Glyma02g44120.1                                                       170   3e-42
Glyma03g22630.1                                                        87   4e-17
Glyma18g42370.1                                                        55   1e-07

>Glyma08g07860.2 
          Length = 384

 Score =  360 bits (925), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 214/416 (51%), Positives = 235/416 (56%), Gaps = 38/416 (9%)

Query: 1   MEFHRXXXXXXXXXXXXXXAAGTPNPQKTDDPMHSWWESVSKARSRIHSLATILPNXXXX 60
           MEFHR                  PN   + DPMHSWWESVSKARSRIH+LA ILP+    
Sbjct: 1   MEFHRSDSSSSPSSSTPTPNNADPNKTSSSDPMHSWWESVSKARSRIHALAAILPSSSSD 60

Query: 61  XXXXXXXXERPXXXXXXXXXXXXXXXXXXXXXXXDPLCHWLYDTFLSSDPXXXXXXXXXX 120
                   +RP                       DPLCHWLYDTFLSSDP          
Sbjct: 61  SLSSLADSDRPALSLLSSPAAYAAVSSSLSGSHSDPLCHWLYDTFLSSDPHLRLVVLSFV 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXSGFEAVLLALYAAETKSRNGKPLIATVPDLSLPS 180
                                     +GFEAVLLALYAAETKSRNGKPL+ T+PDLS PS
Sbjct: 121 PLLSGLYLSRIHSPEPPSL-------AGFEAVLLALYAAETKSRNGKPLVVTIPDLSHPS 173

Query: 181 IYHSPLRKPQNSNANAPS--SVAVISPPLEPLLAVKSTKRASIVGAALQSYFSQISHMPS 238
           IYH+PLRKPQ+      S  SV +ISPPLEP L VKSTKRASIVG AL S+FSQISHMP+
Sbjct: 174 IYHAPLRKPQSQTLTLASTPSVGLISPPLEPQLGVKSTKRASIVGVALHSFFSQISHMPA 233

Query: 239 WSKLEFCRFLAGWAGQ-DCPCRRDLDRVPXXXXXXXXXXXXXXXXXXXXCDREIEIESVG 297
           WSKLEFC+F A WAG   CPCR +LDR                         + +IE   
Sbjct: 234 WSKLEFCQFAAAWAGSAHCPCRNELDR-------------------------DGKIEDFA 268

Query: 298 EMMGKVQIHDSDGL--AKGDRIPLPWEILQPALRILGHCLFAPLNPQEVKDAASFAVRCL 355
             +  V+I D D L   KG+RIPLPWEILQP+LRILGHCL  PLN Q+VKDAASFAVRCL
Sbjct: 269 TAIENVRIRDGDYLEEGKGERIPLPWEILQPSLRILGHCLLGPLNSQDVKDAASFAVRCL 328

Query: 356 YARASHDLVPQAILATRSLIQLXXXXXXXXXXXXXXXXXXXX-XXXKKPEILLVSK 410
           YARASHDLVPQAILATRSLIQL                        KKPEILLVSK
Sbjct: 329 YARASHDLVPQAILATRSLIQLDVRTREAARANAATNSNANTPTKAKKPEILLVSK 384


>Glyma08g07860.1 
          Length = 384

 Score =  360 bits (925), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 214/416 (51%), Positives = 235/416 (56%), Gaps = 38/416 (9%)

Query: 1   MEFHRXXXXXXXXXXXXXXAAGTPNPQKTDDPMHSWWESVSKARSRIHSLATILPNXXXX 60
           MEFHR                  PN   + DPMHSWWESVSKARSRIH+LA ILP+    
Sbjct: 1   MEFHRSDSSSSPSSSTPTPNNADPNKTSSSDPMHSWWESVSKARSRIHALAAILPSSSSD 60

Query: 61  XXXXXXXXERPXXXXXXXXXXXXXXXXXXXXXXXDPLCHWLYDTFLSSDPXXXXXXXXXX 120
                   +RP                       DPLCHWLYDTFLSSDP          
Sbjct: 61  SLSSLADSDRPALSLLSSPAAYAAVSSSLSGSHSDPLCHWLYDTFLSSDPHLRLVVLSFV 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXSGFEAVLLALYAAETKSRNGKPLIATVPDLSLPS 180
                                     +GFEAVLLALYAAETKSRNGKPL+ T+PDLS PS
Sbjct: 121 PLLSGLYLSRIHSPEPPSL-------AGFEAVLLALYAAETKSRNGKPLVVTIPDLSHPS 173

Query: 181 IYHSPLRKPQNSNANAPS--SVAVISPPLEPLLAVKSTKRASIVGAALQSYFSQISHMPS 238
           IYH+PLRKPQ+      S  SV +ISPPLEP L VKSTKRASIVG AL S+FSQISHMP+
Sbjct: 174 IYHAPLRKPQSQTLTLASTPSVGLISPPLEPQLGVKSTKRASIVGVALHSFFSQISHMPA 233

Query: 239 WSKLEFCRFLAGWAGQ-DCPCRRDLDRVPXXXXXXXXXXXXXXXXXXXXCDREIEIESVG 297
           WSKLEFC+F A WAG   CPCR +LDR                         + +IE   
Sbjct: 234 WSKLEFCQFAAAWAGSAHCPCRNELDR-------------------------DGKIEDFA 268

Query: 298 EMMGKVQIHDSDGL--AKGDRIPLPWEILQPALRILGHCLFAPLNPQEVKDAASFAVRCL 355
             +  V+I D D L   KG+RIPLPWEILQP+LRILGHCL  PLN Q+VKDAASFAVRCL
Sbjct: 269 TAIENVRIRDGDYLEEGKGERIPLPWEILQPSLRILGHCLLGPLNSQDVKDAASFAVRCL 328

Query: 356 YARASHDLVPQAILATRSLIQLXXXXXXXXXXXXXXXXXXXX-XXXKKPEILLVSK 410
           YARASHDLVPQAILATRSLIQL                        KKPEILLVSK
Sbjct: 329 YARASHDLVPQAILATRSLIQLDVRTREAARANAATNSNANTPTKAKKPEILLVSK 384


>Glyma05g24630.1 
          Length = 377

 Score =  353 bits (907), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 206/390 (52%), Positives = 225/390 (57%), Gaps = 35/390 (8%)

Query: 24  PNPQKTDDPMHSWWESVSKARSRIHSLATILPNXXXXXXXXXXXXERPXXXXXXXXXXXX 83
           P      DPMHSWWESVSKARSRIH+LA ILP+            +RP            
Sbjct: 20  PKKNTCSDPMHSWWESVSKARSRIHALAAILPSSSSDSLSSLADSDRPALSLLSSPAAYS 79

Query: 84  XXXXXXXXXXXDPLCHWLYDTFLSSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 143
                      DPLCHWLYDTFLSSDP                                 
Sbjct: 80  AVSSSLSGSHFDPLCHWLYDTFLSSDPHLRLVVLSFVPLLAGLYLSRIHSPEPPSL---- 135

Query: 144 XXXSGFEAVLLALYAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSNANAPSSVAVI 203
              +GFEAVLLALYAAETKSRNGKPL+ T+PDLS PSIYH+PLRKPQ      P SV +I
Sbjct: 136 ---AGFEAVLLALYAAETKSRNGKPLVVTIPDLSHPSIYHAPLRKPQTLTLITPPSVGLI 192

Query: 204 SPPLEPLLAVKSTKRASIVGAALQSYFSQISHMPSWSKLEFCRFLAGWAG--QDCPCRRD 261
           SPPLEP L VKSTKRASIVG AL S+FSQISHMP+WSKL FC+F A WAG    CPCR +
Sbjct: 193 SPPLEPQLGVKSTKRASIVGVALHSFFSQISHMPAWSKLHFCQFAAAWAGGASHCPCRNE 252

Query: 262 LDRVPXXXXXXXXXXXXXXXXXXXXCDREIEIESVGEMMGKVQIHDSDGLAKGDRIPLPW 321
           LDR                       D EI +  + +     +I D D   KG+RIPLPW
Sbjct: 253 LDR-----------------------DGEI-VGEINDFANTFEIRD-DTEGKGERIPLPW 287

Query: 322 EILQPALRILGHCLFAPLNPQEVKDAASFAVRCLYARASHDLVPQAILATRSLIQLXXXX 381
           EILQP+LRILGHCL  PLN Q+VKDAASFAVRCLYARASHDLVPQAILATRSLIQL    
Sbjct: 288 EILQPSLRILGHCLLGPLNSQDVKDAASFAVRCLYARASHDLVPQAILATRSLIQLDVRT 347

Query: 382 XXXXXXXXXXXXXXXX-XXXKKPEILLVSK 410
                               KKPEILLVSK
Sbjct: 348 REAAKTNAATNSNANTPTKAKKPEILLVSK 377


>Glyma02g44120.1 
          Length = 343

 Score =  170 bits (430), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/289 (38%), Positives = 152/289 (52%), Gaps = 39/289 (13%)

Query: 95  DPLCHWLYDTFLSSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFEAVLL 154
           + LC WLYDTF S                                       +GFEAVLL
Sbjct: 64  NNLCRWLYDTFQSG---------VTELQLLVLRFLPVIAGVYLSRVADRKPQAGFEAVLL 114

Query: 155 ALYAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSNANAPSS----VAVISPPLEPL 210
           ALYA ET SR G+ +  T+PDL+ PS+YH P     N+N N  SS    VAV+SP LEP 
Sbjct: 115 ALYAHETTSRAGQAVSVTIPDLAQPSLYHDPKALTPNNNKNINSSTELNVAVVSPSLEPH 174

Query: 211 LAVKSTKRASIVGAALQSYFSQISHMPSWSKLEFCRFLAGWAGQDCPCRRDLDRVPXXXX 270
             V+ST+RA IVG AL+ ++++I HMP  SK++FC F   WAGQD    ++L+       
Sbjct: 175 GTVRSTRRARIVGVALELFYAKIPHMPVSSKIDFCEFCKLWAGQDGDMYKNLEEE----- 229

Query: 271 XXXXXXXXXXXXXXXXCDREIEIESVGEMMGKVQIHDSDGLAKGDRIPLPWEILQPALRI 330
                              +   ESV  +  + ++ + +      R+PLPWE+L+P LRI
Sbjct: 230 ------------------EDNGEESVVFVDAEAELEEKEKGKVESRVPLPWELLEPVLRI 271

Query: 331 LGHCLFAPLNPQEVK--DAASFAVRCLYARASHDLVPQAILATRSLIQL 377
           LGHCL    N ++V+  +AAS A RCL+AR+ HD+  +AIL  RSL++L
Sbjct: 272 LGHCLLGQ-NKRDVELFEAASEACRCLFARSMHDVNAKAILPIRSLLRL 319


>Glyma03g22630.1 
          Length = 111

 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/89 (57%), Positives = 59/89 (66%), Gaps = 7/89 (7%)

Query: 148 GFEAVLLALYAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSNANAPSSVAVISPPL 207
           GF+ VL A YA ETKSR+GK L+ T+ D     IYH+P  KP       P SV +ISPPL
Sbjct: 25  GFKVVLSAFYATETKSRSGKLLVVTISD-----IYHTP--KPLALTLTPPPSVGLISPPL 77

Query: 208 EPLLAVKSTKRASIVGAALQSYFSQISHM 236
           E  L VKSTK ASIVG AL S+FSQ SH+
Sbjct: 78  EHQLNVKSTKPASIVGIALHSFFSQSSHV 106


>Glyma18g42370.1 
          Length = 101

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 5/47 (10%)

Query: 147 SGFEAVLLALYAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSN 193
           +GFE VLLALYAAETKS NGK L+ T+PD     IY  P  KPQ++ 
Sbjct: 31  AGFEIVLLALYAAETKSHNGKLLVVTIPD-----IYQDPSIKPQHTT 72