Miyakogusa Predicted Gene

Lj4g3v0338340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0338340.1 Non Chatacterized Hit- tr|D7STF3|D7STF3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38,0.018,seg,NULL,NODE_35575_length_622_cov_62.242764.path1.1
         (177 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g05780.1                                                       139   1e-33

>Glyma15g05780.1 
          Length = 805

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/188 (45%), Positives = 107/188 (56%), Gaps = 13/188 (6%)

Query: 1   MADLFSRSYHCLWIPCRNVPSKHSEQXXXXXXXXXXXXXXXXXLTHHTHLXXXXXXXXXX 60
           MA LFSRS+HCLW+PC NVP K SE+                  THHT L          
Sbjct: 1   MALLFSRSFHCLWLPCCNVPPKSSERLRIYAPIPLPKPWVS--FTHHTRLLPNATSSPNS 58

Query: 61  XXXXXXXXXXTECSDGSFVFQFAKASEIRDKLAELEREK-----------LACEVVEGGG 109
                     TE SDGSFVF+FA A+EIR++L EL ++K           LA E V   G
Sbjct: 59  DPEDFDILSSTEHSDGSFVFRFASANEIREQLDELNKKKKSDALNKKKKKLAREGVLEEG 118

Query: 110 KVGIQALLSDSIEILNNEVDDNLQEESKSSSIVVVGVADQNPQIPINEKESVVLDNESER 169
           K G++AL+S+S++ LN EVD  L  E +SSS VVV VADQNPQ+ +NEKE  VLD++S  
Sbjct: 119 KAGVRALVSESVKKLNTEVDRTLGGEIESSSTVVVDVADQNPQLLLNEKEGDVLDSDSGP 178

Query: 170 TVINESQK 177
            V N+ QK
Sbjct: 179 PVTNDLQK 186