Miyakogusa Predicted Gene

Lj4g3v0336810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0336810.1 Non Chatacterized Hit- tr|A5B610|A5B610_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,69.81,0.000000000007,Mito_carr,Mitochondrial substrate/solute
carrier; no description,Mitochondrial carrier domain;
SUBFA,CUFF.46911.1
         (380 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g24920.1                                                       603   e-172
Glyma08g08020.1                                                       585   e-167
Glyma05g24920.2                                                       490   e-138
Glyma07g31910.2                                                        55   2e-07
Glyma07g31910.1                                                        55   2e-07
Glyma13g43570.1                                                        51   2e-06
Glyma08g00960.1                                                        49   8e-06

>Glyma05g24920.1 
          Length = 380

 Score =  603 bits (1555), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 290/380 (76%), Positives = 322/380 (84%)

Query: 1   MDDLSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSV 60
           M++LS+ Q   VHGIAGAGSVALAT FTYPLDT+KVL QVGSS GKEL+   VL R+LSV
Sbjct: 1   MNELSQKQTLVVHGIAGAGSVALATAFTYPLDTMKVLIQVGSSTGKELDHTHVLTRLLSV 60

Query: 61  SGNAGLFSGYGWLAFGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIE 120
           SGNAGLF+G+GWL  GR FGLGARFGVYEIL+AF KDGRE+NY++ SEALLAG+ AGAIE
Sbjct: 61  SGNAGLFNGFGWLLVGRIFGLGARFGVYEILSAFYKDGRENNYLFASEALLAGVVAGAIE 120

Query: 121 TFISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVARLLNGCHPEKRSLNQYVDLIS 180
             ISSPFELIKLRMQVSSASY+PSSNFALE+G R PL+ARLL+GC+P++R+L+QY+ LIS
Sbjct: 121 AVISSPFELIKLRMQVSSASYVPSSNFALEKGARTPLIARLLHGCYPDRRALDQYIGLIS 180

Query: 181 TLKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVRDSV 240
           TLK KN NL  ALLEYPWTMTGSG PPSV NVRRPSDIISLEGWSTLWRG RSG+VRDSV
Sbjct: 181 TLKAKNTNLTSALLEYPWTMTGSGSPPSVSNVRRPSDIISLEGWSTLWRGLRSGIVRDSV 240

Query: 241 FGGIFFSSWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPXXXXXXXXXXXXXXXXXXHGF 300
           FGG+FFS+WQ LHQAMLDWKA GMNPPPRLNEEVGPLSP                  H F
Sbjct: 241 FGGVFFSTWQFLHQAMLDWKAAGMNPPPRLNEEVGPLSPLTVSLTAGFSASVAAAASHSF 300

Query: 301 DTARTRTQCTVLPKYVSMERKFLKWKRLGNKFERITGIHPSDRNVLFRGVGLRMARSGLA 360
           DT R+R+QCTVLPKY+SMERK LKWKR GNKFERITGIHPSDR VLFRG+G RMARSGLA
Sbjct: 301 DTTRSRSQCTVLPKYISMERKILKWKRPGNKFERITGIHPSDRGVLFRGIGWRMARSGLA 360

Query: 361 SFMVVGSYFFVVDHLASSLT 380
           SF++VGSY FV D LASSLT
Sbjct: 361 SFIIVGSYLFVADQLASSLT 380


>Glyma08g08020.1 
          Length = 380

 Score =  585 bits (1508), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 280/380 (73%), Positives = 314/380 (82%)

Query: 1   MDDLSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSV 60
           M +LS+ Q   VHGIAGAGSVALAT FTYPLD+IKVL QVGSS GKEL+ A+ L R+LSV
Sbjct: 1   MKELSQTQSVVVHGIAGAGSVALATAFTYPLDSIKVLIQVGSSTGKELDPAQALTRLLSV 60

Query: 61  SGNAGLFSGYGWLAFGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIE 120
           SGNAGLF+G+GWL  GR FGLGARFGVYEIL AF KDGRE+NY++ SEALLAG+ AGA+E
Sbjct: 61  SGNAGLFNGFGWLLAGRIFGLGARFGVYEILTAFYKDGRENNYLFASEALLAGVVAGAVE 120

Query: 121 TFISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVARLLNGCHPEKRSLNQYVDLIS 180
             ISSPFELIKLRMQV++ASY+PSSNFALE+G R PL+ARLL+G +P+KR+L+ YV LIS
Sbjct: 121 AVISSPFELIKLRMQVTAASYVPSSNFALEKGARSPLIARLLHGRYPDKRALDLYVGLIS 180

Query: 181 TLKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVRDSV 240
            LK KN N+  ALLEYPWTMTGSG+PPSV NVRRPSDIISLEGW T WRG R G+VRDSV
Sbjct: 181 ILKTKNTNVTSALLEYPWTMTGSGRPPSVSNVRRPSDIISLEGWRTFWRGLRPGIVRDSV 240

Query: 241 FGGIFFSSWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPXXXXXXXXXXXXXXXXXXHGF 300
           F GIFFS+WQ LHQAMLDWKAVGM+PPPRLNEEVGPLSP                  H F
Sbjct: 241 FSGIFFSTWQFLHQAMLDWKAVGMDPPPRLNEEVGPLSPLIVSLTAGFSASVAATASHSF 300

Query: 301 DTARTRTQCTVLPKYVSMERKFLKWKRLGNKFERITGIHPSDRNVLFRGVGLRMARSGLA 360
           DT R+R+QCTVLPKY+SMERK LKWKR G KFERITGIHPSDR VLFRG+G RMARSGLA
Sbjct: 301 DTTRSRSQCTVLPKYISMERKILKWKRPGTKFERITGIHPSDRGVLFRGIGWRMARSGLA 360

Query: 361 SFMVVGSYFFVVDHLASSLT 380
           SF++VGSY FV D L SSLT
Sbjct: 361 SFIIVGSYLFVADQLGSSLT 380


>Glyma05g24920.2 
          Length = 315

 Score =  490 bits (1261), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 235/314 (74%), Positives = 263/314 (83%)

Query: 1   MDDLSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSV 60
           M++LS+ Q   VHGIAGAGSVALAT FTYPLDT+KVL QVGSS GKEL+   VL R+LSV
Sbjct: 1   MNELSQKQTLVVHGIAGAGSVALATAFTYPLDTMKVLIQVGSSTGKELDHTHVLTRLLSV 60

Query: 61  SGNAGLFSGYGWLAFGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIE 120
           SGNAGLF+G+GWL  GR FGLGARFGVYEIL+AF KDGRE+NY++ SEALLAG+ AGAIE
Sbjct: 61  SGNAGLFNGFGWLLVGRIFGLGARFGVYEILSAFYKDGRENNYLFASEALLAGVVAGAIE 120

Query: 121 TFISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVARLLNGCHPEKRSLNQYVDLIS 180
             ISSPFELIKLRMQVSSASY+PSSNFALE+G R PL+ARLL+GC+P++R+L+QY+ LIS
Sbjct: 121 AVISSPFELIKLRMQVSSASYVPSSNFALEKGARTPLIARLLHGCYPDRRALDQYIGLIS 180

Query: 181 TLKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVRDSV 240
           TLK KN NL  ALLEYPWTMTGSG PPSV NVRRPSDIISLEGWSTLWRG RSG+VRDSV
Sbjct: 181 TLKAKNTNLTSALLEYPWTMTGSGSPPSVSNVRRPSDIISLEGWSTLWRGLRSGIVRDSV 240

Query: 241 FGGIFFSSWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPXXXXXXXXXXXXXXXXXXHGF 300
           FGG+FFS+WQ LHQAMLDWKA GMNPPPRLNEEVGPLSP                  H F
Sbjct: 241 FGGVFFSTWQFLHQAMLDWKAAGMNPPPRLNEEVGPLSPLTVSLTAGFSASVAAAASHSF 300

Query: 301 DTARTRTQCTVLPK 314
           DT R+R+QCTVLPK
Sbjct: 301 DTTRSRSQCTVLPK 314


>Glyma07g31910.2 
          Length = 305

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 18  AGSVALATGFTYPLDTIKVLTQVGSSAGKEL---NAAEVLMRVLSVSGNAGLFSGYGWLA 74
           AG  A+ATG  +P DT+KV+ Q  ++   ++   N      R+L   G  GL+ G     
Sbjct: 18  AGVAAVATG--HPFDTVKVMLQKHNAEAHKIQYKNGWHCTARILKTEGIKGLYRGATSSF 75

Query: 75  FGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIETFISSPFELIKLRM 134
            G        FG+Y     + + G +     P   + +   +GAI +F+  P ELIK RM
Sbjct: 76  VGMAVEGSLFFGIYSQTKVYLQGGVQSGEPRPQVIIPSAAYSGAIISFVLGPTELIKCRM 135

Query: 135 QVS-SASYIPSSN 146
           Q+  + S +P S+
Sbjct: 136 QIQGTDSLVPKSS 148


>Glyma07g31910.1 
          Length = 305

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 18  AGSVALATGFTYPLDTIKVLTQVGSSAGKEL---NAAEVLMRVLSVSGNAGLFSGYGWLA 74
           AG  A+ATG  +P DT+KV+ Q  ++   ++   N      R+L   G  GL+ G     
Sbjct: 18  AGVAAVATG--HPFDTVKVMLQKHNAEAHKIQYKNGWHCTARILKTEGIKGLYRGATSSF 75

Query: 75  FGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIETFISSPFELIKLRM 134
            G        FG+Y     + + G +     P   + +   +GAI +F+  P ELIK RM
Sbjct: 76  VGMAVEGSLFFGIYSQTKVYLQGGVQSGEPRPQVIIPSAAYSGAIISFVLGPTELIKCRM 135

Query: 135 QVS-SASYIPSSN 146
           Q+  + S +P S+
Sbjct: 136 QIQGTDSLVPKSS 148


>Glyma13g43570.1 
          Length = 295

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 42/277 (15%)

Query: 19  GSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSVSGNAGLFSGYGWLAFGRT 78
           G+  + +G  YPLDT++V+ Q   S+     A  +L  +++  G   L+ G        T
Sbjct: 23  GTAGIISG--YPLDTLRVMQQ---SSNNGSAAFTILRNLVAKEGPTALYRGMAAPLASVT 77

Query: 79  FGLGARFGVYEILA-AFSKDGREDNYVYPSEALLAGMAAGAIETFISSPFELIKLRMQVS 137
           F     F +Y +L+ AFS     ++        L G  +GA+++ + SP EL+K+R+Q+ 
Sbjct: 78  FQNAMVFQIYAVLSRAFSTSVSVNDPPSYKGVALGGFCSGALQSMLLSPVELVKIRLQLQ 137

Query: 138 SA--SYIP-------SSNFALEEGGR---KPLVARLLNGC-----------------HPE 168
           +   S  P       ++N    EG R   + L   +L                    HP 
Sbjct: 138 NTGQSTEPQKGPIKVANNIWKREGLRGIYRGLGITMLRDAPAHGLYFWTYEYAREKLHPG 197

Query: 169 KRSLNQYVDLISTLKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISL------- 221
            R   Q       +    A +   +  YP  +  +       + R+   I+         
Sbjct: 198 CRRSCQETLNTMLVSGGLAGVVSWVFSYPLDVIKTRLQAQTLSSRKYKGILDCLRKSVEE 257

Query: 222 EGWSTLWRGFRSGLVRDSVFGGIFFSSWQLLHQAMLD 258
           EG+  LWRG  + + R  V  G  FS++++  + + D
Sbjct: 258 EGYVVLWRGLGTAVARAFVVNGAIFSAYEITLRCLFD 294


>Glyma08g00960.1 
          Length = 492

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 23/161 (14%)

Query: 4   LSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSVSGN 63
           + +++ F   GIAGA S       T PLD +KVL QV +     + A   +M++    G 
Sbjct: 208 VHRSRYFIAGGIAGAASRTA----TAPLDRLKVLLQVQTGRASIMPA---VMKIWRQDGL 260

Query: 64  AGLFSGYGWLAFGRTFGLGARFGVYEILAAF---SKDGREDNYVYPSEALLAGMAAGAIE 120
            G F G G            +F  YE+L      ++DG+ D  +  +  L AG  AGA+ 
Sbjct: 261 LGFFRGNGLNVVKVAPESAIKFYAYEMLKNVIGDAQDGKSD--IGTAGRLFAGGMAGAVA 318

Query: 121 TFISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVARL 161
                P +L+K R+Q  ++           +GGR P +  L
Sbjct: 319 QMAIYPMDLVKTRLQTCAS-----------DGGRVPKLGTL 348