Miyakogusa Predicted Gene

Lj4g3v0279760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0279760.1 Non Chatacterized Hit- tr|I1K320|I1K320_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8628
PE=,54.05,0.0000000000003,seg,NULL,CUFF.46758.1
         (80 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g08860.1                                                        70   4e-13
Glyma05g25920.1                                                        68   2e-12
Glyma02g45570.1                                                        60   5e-10
Glyma14g03330.1                                                        59   8e-10

>Glyma08g08860.1 
          Length = 71

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 43/57 (75%), Gaps = 1/57 (1%)

Query: 24 ETLRLKFLLPSLFKWKRLRALQVSFTDNVVFKVLSAFEAIVLVFRACFFYLCCGCNF 80
          E+LR K+L  + FKWKRL +L VSF +NV FK+LS FEAI LV  ACFFYL CGC F
Sbjct: 16 ESLRWKYL-GAAFKWKRLSSLPVSFFNNVAFKILSLFEAIFLVLTACFFYLMCGCRF 71


>Glyma05g25920.1 
          Length = 74

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 41/57 (71%)

Query: 24 ETLRLKFLLPSLFKWKRLRALQVSFTDNVVFKVLSAFEAIVLVFRACFFYLCCGCNF 80
          E+ R K+L  ++FKWK L +  VSF ++V FK+LS FEAI LV  ACFFYL CGC F
Sbjct: 18 ESQRWKYLGAAIFKWKSLSSFPVSFFNHVAFKILSLFEAIFLVLTACFFYLMCGCRF 74


>Glyma02g45570.1 
          Length = 68

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 34/45 (75%), Gaps = 1/45 (2%)

Query: 36 FKWKRLRALQVSFTDNVVFKVLSAFEAIVLVFRACFFYLCCGCNF 80
          F+WKRL  LQ +  D VVFKVL A EA+VLV   CFFYLCCGC+F
Sbjct: 25 FRWKRLD-LQTTIMDTVVFKVLYAAEAVVLVSTLCFFYLCCGCHF 68


>Glyma14g03330.1 
          Length = 61

 Score = 59.3 bits (142), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)

Query: 36 FKWKRLRALQVSFTDNVVFKVLSAFEAIVLVFRACFFYLCCGCNF 80
          F+WKRL  LQ +  D VVFK+L A EA+VLV   CFFYLCCGC+F
Sbjct: 18 FRWKRLD-LQTTIIDTVVFKILYAAEAVVLVSTLCFFYLCCGCHF 61