Miyakogusa Predicted Gene

Lj4g3v0268740.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0268740.1 tr|B9I102|B9I102_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_805855 PE=4
SV=1,36.52,0.000000000000008,seg,NULL,CUFF.46790.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g25960.1                                                       184   3e-47
Glyma08g08900.1                                                       182   9e-47

>Glyma05g25960.1 
          Length = 237

 Score =  184 bits (466), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 100/124 (80%)

Query: 1   MPTREYFLPEKAVLPLAGVAIDTCIHAPLASAFDAVLPPGVRQITPSERFKLQPSVICPK 60
           M T+EYFLP+K VLPLA  AID  + APLASAFDA LPPGVRQITP ERF +QPS  CPK
Sbjct: 1   MQTQEYFLPDKMVLPLADEAIDPHMRAPLASAFDAYLPPGVRQITPFERFNVQPSEACPK 60

Query: 61  NFVICDQTRQQGRILVHPSMTSKFNSHGLMVHATCTQDLEKNKINQMEREFSSSFEEDPD 120
           NFVI DQT Q+ RI+ HP+MT KFNS GL VHAT +QD EKNK NQMERE SS FEEDP+
Sbjct: 61  NFVIFDQTDQRSRIMFHPAMTYKFNSPGLNVHATGSQDFEKNKANQMEREVSSPFEEDPN 120

Query: 121 DIDA 124
           DIDA
Sbjct: 121 DIDA 124


>Glyma08g08900.1 
          Length = 239

 Score =  182 bits (462), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 89/124 (71%), Positives = 98/124 (79%)

Query: 1   MPTREYFLPEKAVLPLAGVAIDTCIHAPLASAFDAVLPPGVRQITPSERFKLQPSVICPK 60
           M TREYFLP+K  LPLA   ID  +HAPLAS FDA LPPGVRQITP ERFKL PS  CPK
Sbjct: 1   MQTREYFLPDKMGLPLADETIDPHMHAPLASTFDAYLPPGVRQITPIERFKLLPSEACPK 60

Query: 61  NFVICDQTRQQGRILVHPSMTSKFNSHGLMVHATCTQDLEKNKINQMEREFSSSFEEDPD 120
           NFVI DQT QQ RI+ HP+MT KF+S  L  HAT +QD EKNK+NQMERE SS+FEEDP+
Sbjct: 61  NFVIFDQTDQQSRIMFHPAMTYKFDSPSLHAHATGSQDFEKNKVNQMERELSSAFEEDPN 120

Query: 121 DIDA 124
           DIDA
Sbjct: 121 DIDA 124