Miyakogusa Predicted Gene

Lj4g3v0258640.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0258640.2 Non Chatacterized Hit- tr|I3SUK1|I3SUK1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.5,0,FAMILY NOT
NAMED,NULL; no description,NULL; cobW,CobW/HypB/UreG domain; P-loop
containing nucleoside,CUFF.46766.2
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g08970.1                                                       313   6e-86
Glyma08g08970.3                                                       313   7e-86
Glyma08g08970.2                                                       312   1e-85

>Glyma08g08970.1 
          Length = 285

 Score =  313 bits (803), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 147/161 (91%), Positives = 158/161 (98%)

Query: 42  SDSYVGPDGKVYHSHDGLAPHSHEPIYSPGFFTRRAPPLINRDFNERAFTIGIGGPVGTG 101
           ++S+VG DGKVYHSHDGLAPHSHEPIYSPG+FTRRAPPL+NR+FNERAFT+GIGGPVGTG
Sbjct: 36  TNSWVGKDGKVYHSHDGLAPHSHEPIYSPGYFTRRAPPLLNRNFNERAFTVGIGGPVGTG 95

Query: 102 KTALMLALCEFLRDNYSLAAVTNDIFTKEDGEFLVRNKALPEERIRAVETGGCPHAAIRE 161
           KTALMLALCE LR+NYSLAAVTNDIFTKEDGEFLV++KALPEERIRAVETGGCPHAAIRE
Sbjct: 96  KTALMLALCELLRENYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVETGGCPHAAIRE 155

Query: 162 DISINLGPLEELSNLYKTDILLCESGGDNLAANFSRELADY 202
           DISINLGPLEELSNL+K DILLCESGGDNLAANFSRELADY
Sbjct: 156 DISINLGPLEELSNLFKADILLCESGGDNLAANFSRELADY 196


>Glyma08g08970.3 
          Length = 274

 Score =  313 bits (802), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 147/161 (91%), Positives = 158/161 (98%)

Query: 42  SDSYVGPDGKVYHSHDGLAPHSHEPIYSPGFFTRRAPPLINRDFNERAFTIGIGGPVGTG 101
           ++S+VG DGKVYHSHDGLAPHSHEPIYSPG+FTRRAPPL+NR+FNERAFT+GIGGPVGTG
Sbjct: 36  TNSWVGKDGKVYHSHDGLAPHSHEPIYSPGYFTRRAPPLLNRNFNERAFTVGIGGPVGTG 95

Query: 102 KTALMLALCEFLRDNYSLAAVTNDIFTKEDGEFLVRNKALPEERIRAVETGGCPHAAIRE 161
           KTALMLALCE LR+NYSLAAVTNDIFTKEDGEFLV++KALPEERIRAVETGGCPHAAIRE
Sbjct: 96  KTALMLALCELLRENYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVETGGCPHAAIRE 155

Query: 162 DISINLGPLEELSNLYKTDILLCESGGDNLAANFSRELADY 202
           DISINLGPLEELSNL+K DILLCESGGDNLAANFSRELADY
Sbjct: 156 DISINLGPLEELSNLFKADILLCESGGDNLAANFSRELADY 196


>Glyma08g08970.2 
          Length = 260

 Score =  312 bits (800), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 147/161 (91%), Positives = 158/161 (98%)

Query: 42  SDSYVGPDGKVYHSHDGLAPHSHEPIYSPGFFTRRAPPLINRDFNERAFTIGIGGPVGTG 101
           ++S+VG DGKVYHSHDGLAPHSHEPIYSPG+FTRRAPPL+NR+FNERAFT+GIGGPVGTG
Sbjct: 36  TNSWVGKDGKVYHSHDGLAPHSHEPIYSPGYFTRRAPPLLNRNFNERAFTVGIGGPVGTG 95

Query: 102 KTALMLALCEFLRDNYSLAAVTNDIFTKEDGEFLVRNKALPEERIRAVETGGCPHAAIRE 161
           KTALMLALCE LR+NYSLAAVTNDIFTKEDGEFLV++KALPEERIRAVETGGCPHAAIRE
Sbjct: 96  KTALMLALCELLRENYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVETGGCPHAAIRE 155

Query: 162 DISINLGPLEELSNLYKTDILLCESGGDNLAANFSRELADY 202
           DISINLGPLEELSNL+K DILLCESGGDNLAANFSRELADY
Sbjct: 156 DISINLGPLEELSNLFKADILLCESGGDNLAANFSRELADY 196